RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 GCNT6Q5T4J0 391 aa14.75□□□□□ -0.05
ARHGEF40-207ENST00000556399 TMPRSS11AQ6ZMR5 421 aa14.75□□□□□ -0.05
ARHGEF40-207ENST00000556399 SYVN1Q86TM6 617 aa14.75□□□□□ -0.05
ARHGEF40-207ENST00000556399 CLIP4Q8N3C7 705 aa14.75□□□□□ -0.05
ARHGEF40-207ENST00000556399 SLC15A4Q8N697 577 aa14.75□□□□□ -0.05
ARHGEF40-207ENST00000556399 RHEBL1Q8TAI7 183 aa14.75□□□□□ -0.05
ARHGEF40-207ENST00000556399 C1GALT1C1Q96EU7 318 aa14.75□□□□□ -0.05
ARHGEF40-207ENST00000556399 IL12RB2Q99665 862 aa14.75□□□□□ -0.05
ARHGEF40-207ENST00000556399 CNPPD1Q9BV87 410 aa14.75□□□□□ -0.05
ARHGEF40-207ENST00000556399 CMTM6Q9NX76 183 aa14.75□□□□□ -0.05
ARHGEF40-207ENST00000556399 SPG21Q9NZD8 308 aa14.75□□□□□ -0.05
ARHGEF40-207ENST00000556399 PCDHB3Q9Y5E6 796 aa14.75□□□□□ -0.05
ARHGEF40-207ENST00000556399 PAPPAQ13219 1627 aa14.74□□□□□ -0.05
ARHGEF40-207ENST00000556399 HMX2A2RU54 273 aa14.74□□□□□ -0.05
ARHGEF40-207ENST00000556399 INMTO95050 263 aa14.74□□□□□ -0.05
ARHGEF40-207ENST00000556399 FEN1P39748 380 aaKnown RBP14.74□□□□□ -0.05
ARHGEF40-207ENST00000556399 SRSF11Q05519 484 aaKnown RBP14.74□□□□□ -0.05
ARHGEF40-207ENST00000556399 MADCAM1Q13477 382 aa14.74□□□□□ -0.05
ARHGEF40-207ENST00000556399 TMEM236Q5W0B7 351 aa14.74□□□□□ -0.05
ARHGEF40-207ENST00000556399 PHACTR4Q8IZ21 702 aa14.74□□□□□ -0.05
ARHGEF40-207ENST00000556399 ANKRD49Q8WVL7 239 aa14.74□□□□□ -0.05
ARHGEF40-207ENST00000556399 AASDHPPTQ9NRN7 309 aa14.74□□□□□ -0.05
ARHGEF40-207ENST00000556399 A0A1B0GW55 424 aa14.74□□□□□ -0.05
ARHGEF40-207ENST00000556399 C7orf72A4D263 438 aa14.74□□□□□ -0.05
ARHGEF40-207ENST00000556399 AURKAO14965 403 aa14.74□□□□□ -0.05
ARHGEF40-207ENST00000556399 DUX4L2P0CJ85 424 aa14.74□□□□□ -0.05
ARHGEF40-207ENST00000556399 DUX4L3P0CJ86 424 aa14.74□□□□□ -0.05
ARHGEF40-207ENST00000556399 DUX4L4P0CJ87 422 aa14.74□□□□□ -0.05
ARHGEF40-207ENST00000556399 DUX4L5P0CJ88 424 aa14.74□□□□□ -0.05
ARHGEF40-207ENST00000556399 DUX4L6P0CJ89 424 aa14.74□□□□□ -0.05
ARHGEF40-207ENST00000556399 DUX4L7P0CJ90 424 aa14.74□□□□□ -0.05
ARHGEF40-207ENST00000556399 C4BPBP20851 252 aa14.74□□□□□ -0.05
ARHGEF40-207ENST00000556399 TPRG1LQ5T0D9 272 aa14.74□□□□□ -0.05
ARHGEF40-207ENST00000556399 IFNLR1Q8IU57 520 aaPredicted RBP14.74□□□□□ -0.05
ARHGEF40-207ENST00000556399 PNPLA1Q8N8W4 532 aa14.74□□□□□ -0.05
ARHGEF40-207ENST00000556399 CNIH3Q8TBE1 160 aa14.74□□□□□ -0.05
ARHGEF40-207ENST00000556399 DIRAS2Q96HU8 199 aa14.74□□□□□ -0.05
ARHGEF40-207ENST00000556399 DMRTB1Q96MA1 342 aa14.74□□□□□ -0.05
ARHGEF40-207ENST00000556399 ZNF599Q96NL3 588 aa14.74□□□□□ -0.05
ARHGEF40-207ENST00000556399 DUX4Q9UBX2 424 aa14.74□□□□□ -0.05
ARHGEF40-207ENST00000556399 AP2A2O94973 939 aa14.74□□□□□ -0.05
ARHGEF40-207ENST00000556399 PRKAR1AP10644 381 aa14.74□□□□□ -0.05
ARHGEF40-207ENST00000556399 RPL10P27635 214 aaKnown RBP14.74□□□□□ -0.05
ARHGEF40-207ENST00000556399 GDF5P43026 501 aa14.74□□□□□ -0.05
ARHGEF40-207ENST00000556399 GALNT1Q10472 559 aaPredicted RBP14.74□□□□□ -0.05
ARHGEF40-207ENST00000556399 ZNF789Q5FWF6 425 aa14.74□□□□□ -0.05
ARHGEF40-207ENST00000556399 VARS2Q5ST30 1063 aaKnown RBP14.74□□□□□ -0.05
ARHGEF40-207ENST00000556399 ISCA2Q86U28 154 aa14.74□□□□□ -0.05
ARHGEF40-207ENST00000556399 CHERPQ8IWX8 916 aaKnown RBP14.74□□□□□ -0.05
ARHGEF40-207ENST00000556399 UBE2E3Q969T4 207 aa14.74□□□□□ -0.05
ARHGEF40-207ENST00000556399 C8orf48Q96LL4 319 aa14.74□□□□□ -0.05
ARHGEF40-207ENST00000556399 KCNC2Q96PR1 638 aa14.74□□□□□ -0.05
ARHGEF40-207ENST00000556399 C16orf70Q9BSU1 422 aa14.74□□□□□ -0.05
ARHGEF40-207ENST00000556399 MAP4K5Q9Y4K4 846 aa14.74□□□□□ -0.05
ARHGEF40-207ENST00000556399 TCRBV3S1A0A5B6 114 aa14.74□□□□□ -0.05
ARHGEF40-207ENST00000556399 FADS2P1A8MWK0 482 aa14.74□□□□□ -0.05
ARHGEF40-207ENST00000556399 ARSDP51689 593 aa14.74□□□□□ -0.05
ARHGEF40-207ENST00000556399 SRP54P61011 504 aaKnown RBP14.74□□□□□ -0.05
ARHGEF40-207ENST00000556399 RPS24P62847 133 aaKnown RBP14.74□□□□□ -0.05
ARHGEF40-207ENST00000556399 SREBF2Q12772 1141 aa14.74□□□□□ -0.05
ARHGEF40-207ENST00000556399 MS4A13Q5J8X5 152 aa14.74□□□□□ -0.05
ARHGEF40-207ENST00000556399 ZNF614Q8N883 585 aa14.74□□□□□ -0.05
ARHGEF40-207ENST00000556399 LRCH3Q96II8 777 aa14.74□□□□□ -0.05
ARHGEF40-207ENST00000556399 ABCB9Q9NP78 766 aa14.74□□□□□ -0.05
ARHGEF40-207ENST00000556399 ADAMTS5Q9UNA0 930 aa14.74□□□□□ -0.05
ARHGEF40-207ENST00000556399 LYVE1Q9Y5Y7 322 aa14.74□□□□□ -0.05
ARHGEF40-207ENST00000556399 SESN1Q9Y6P5 492 aa14.74□□□□□ -0.05
ARHGEF40-207ENST00000556399 FUOMA2VDF0 154 aa14.73□□□□□ -0.05
ARHGEF40-207ENST00000556399 CLIC1O00299 241 aa14.73□□□□□ -0.05
ARHGEF40-207ENST00000556399 XYLBO75191 536 aa14.73□□□□□ -0.05
ARHGEF40-207ENST00000556399 ATN1P54259 1190 aaPredicted RBP14.73□□□□□ -0.05
ARHGEF40-207ENST00000556399 OR2B6P58173 313 aa14.73□□□□□ -0.05
ARHGEF40-207ENST00000556399 MXD1Q05195 221 aa14.73□□□□□ -0.05
ARHGEF40-207ENST00000556399 SCN1BQ07699 218 aa14.73□□□□□ -0.05
ARHGEF40-207ENST00000556399 ATXN7L2Q5T6C5 722 aaPredicted RBP14.73□□□□□ -0.05
ARHGEF40-207ENST00000556399 ATAD3BQ5T9A4 648 aa14.73□□□□□ -0.05
ARHGEF40-207ENST00000556399 CCDC149Q6ZUS6 474 aa14.73□□□□□ -0.05
ARHGEF40-207ENST00000556399 SHKBP1Q8TBC3 707 aa14.73□□□□□ -0.05
ARHGEF40-207ENST00000556399 ASZ1Q8WWH4 475 aa14.73□□□□□ -0.05
ARHGEF40-207ENST00000556399 TEFMQ96QE5 360 aaKnown RBP14.73□□□□□ -0.05
ARHGEF40-207ENST00000556399 OSGEPL1Q9H4B0 414 aa14.73□□□□□ -0.05
ARHGEF40-207ENST00000556399 DFNA5O60443 496 aa14.73□□□□□ -0.05
ARHGEF40-207ENST00000556399 CCNDBP1O95273 360 aa14.73□□□□□ -0.05
ARHGEF40-207ENST00000556399 NR2F1P10589 423 aa14.73□□□□□ -0.05
ARHGEF40-207ENST00000556399 TIE1P35590 1138 aa14.73□□□□□ -0.05
ARHGEF40-207ENST00000556399 PTPN5P54829 565 aa14.73□□□□□ -0.05
ARHGEF40-207ENST00000556399 OR4D1Q15615 310 aa14.73□□□□□ -0.05
ARHGEF40-207ENST00000556399 ZSWIM7Q19AV6 140 aa14.73□□□□□ -0.05
ARHGEF40-207ENST00000556399 C6orf183Q5T699 404 aa14.73□□□□□ -0.05
ARHGEF40-207ENST00000556399 TMCO6Q96DC7 493 aa14.73□□□□□ -0.05
ARHGEF40-207ENST00000556399 L3HYPDHQ96EM0 354 aa14.73□□□□□ -0.05
ARHGEF40-207ENST00000556399 FNDC11Q9BVV2 318 aa14.73□□□□□ -0.05
ARHGEF40-207ENST00000556399 FUNDC2Q9BWH2 189 aa14.73□□□□□ -0.05
ARHGEF40-207ENST00000556399 GSTO2Q9H4Y5 243 aa14.73□□□□□ -0.05
ARHGEF40-207ENST00000556399 ING3Q9NXR8 418 aa14.73□□□□□ -0.05
ARHGEF40-207ENST00000556399 HPRP00739 348 aa14.73□□□□□ -0.05
ARHGEF40-207ENST00000556399 OR1D2P34982 312 aa14.73□□□□□ -0.05
ARHGEF40-207ENST00000556399 NAE1Q13564 534 aa14.73□□□□□ -0.05
ARHGEF40-207ENST00000556399 ZNF404Q494X3 552 aa14.73□□□□□ -0.05
ARHGEF40-207ENST00000556399 OR4F3Q6IEY1 312 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms