RNA–Protein interactions for RNA: ENST00000556142.5

HNRNPC-223, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5 BASIC

Gene HNRNPC, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-223ENST00000556142 HNMTP50135 292 aa9.24□□□□□ -0.93
HNRNPC-223ENST00000556142 HTR6P50406 440 aa9.24□□□□□ -0.93
HNRNPC-223ENST00000556142 MNAT1P51948 309 aa9.24□□□□□ -0.93
HNRNPC-223ENST00000556142 AP1S2P56377 157 aa9.24□□□□□ -0.93
HNRNPC-223ENST00000556142 PFN3P60673 137 aa9.24□□□□□ -0.93
HNRNPC-223ENST00000556142 CDK3Q00526 305 aa9.24□□□□□ -0.93
HNRNPC-223ENST00000556142 ABRQ12979 859 aa9.24□□□□□ -0.93
HNRNPC-223ENST00000556142 CYLC2Q14093 348 aaPredicted RBP9.24□□□□□ -0.93
HNRNPC-223ENST00000556142 CCSMST1Q4G0I0 132 aa9.24□□□□□ -0.93
HNRNPC-223ENST00000556142 DNAL1Q4LDG9 190 aa9.24□□□□□ -0.93
HNRNPC-223ENST00000556142 TMEM259Q4ZIN3 620 aa9.24□□□□□ -0.93
HNRNPC-223ENST00000556142 WASHC2DQ5SRD0 308 aa9.24□□□□□ -0.93
HNRNPC-223ENST00000556142 PRAMEF9Q5VWM5 478 aa9.24□□□□□ -0.93
HNRNPC-223ENST00000556142 NEK5Q6P3R8 708 aa9.24□□□□□ -0.93
HNRNPC-223ENST00000556142 LRRC70Q7Z2Q7 622 aa9.24□□□□□ -0.93
HNRNPC-223ENST00000556142 MILR1Q7Z6M3 343 aa9.24□□□□□ -0.93
HNRNPC-223ENST00000556142 SNX32Q86XE0 403 aa9.24□□□□□ -0.93
HNRNPC-223ENST00000556142 FUNDC1Q8IVP5 155 aa9.24□□□□□ -0.93
HNRNPC-223ENST00000556142 UBALD2Q8IYN6 164 aa9.24□□□□□ -0.93
HNRNPC-223ENST00000556142 CDYL2Q8N8U2 506 aa9.24□□□□□ -0.93
HNRNPC-223ENST00000556142 DCBLD1Q8N8Z6 715 aa9.24□□□□□ -0.93
HNRNPC-223ENST00000556142 FBXO15Q8NCQ5 510 aaPredicted RBP9.24□□□□□ -0.93
HNRNPC-223ENST00000556142 OR2L2Q8NH16 312 aa9.24□□□□□ -0.93
HNRNPC-223ENST00000556142 FOXJ1Q92949 421 aa9.24□□□□□ -0.93
HNRNPC-223ENST00000556142 ZNF514Q96K75 400 aaPredicted RBP9.24□□□□□ -0.93
HNRNPC-223ENST00000556142 CCT7Q99832 543 aa9.24□□□□□ -0.93
HNRNPC-223ENST00000556142 LGR4Q9BXB1 951 aa9.24□□□□□ -0.93
HNRNPC-223ENST00000556142 C1QTNF2Q9BXJ5 285 aa9.24□□□□□ -0.93
HNRNPC-223ENST00000556142 DENND2DQ9H6A0 471 aaPredicted RBP9.24□□□□□ -0.93
HNRNPC-223ENST00000556142 SLC52A3Q9NQ40 469 aa9.24□□□□□ -0.93
HNRNPC-223ENST00000556142 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.24□□□□□ -0.93
HNRNPC-223ENST00000556142 ARL15Q9NXU5 204 aa9.24□□□□□ -0.93
HNRNPC-223ENST00000556142 OPTCQ9UBM4 332 aa9.24□□□□□ -0.93
HNRNPC-223ENST00000556142 TRPS1Q9UHF7 1281 aa9.24□□□□□ -0.93
HNRNPC-223ENST00000556142 PTPRZ1P23471 2315 aaPredicted RBP9.24□□□□□ -0.93
HNRNPC-223ENST00000556142 WDR87Q6ZQQ6 2873 aa9.24□□□□□ -0.93
HNRNPC-223ENST00000556142 MED19A0JLT2 244 aaPredicted RBP9.24□□□□□ -0.93
HNRNPC-223ENST00000556142 KRT87PA6NCN2 255 aa9.24□□□□□ -0.93
HNRNPC-223ENST00000556142 NARSO43776 548 aaKnown RBP9.24□□□□□ -0.93
HNRNPC-223ENST00000556142 RNASEH2AO75792 299 aaKnown RBP9.24□□□□□ -0.93
HNRNPC-223ENST00000556142 WDR47O94967 919 aa9.24□□□□□ -0.93
HNRNPC-223ENST00000556142 PCDH8O95206 1070 aa9.24□□□□□ -0.93
HNRNPC-223ENST00000556142 C1orf105O95561 183 aa9.24□□□□□ -0.93
HNRNPC-223ENST00000556142 PCCBP05166 539 aa9.24□□□□□ -0.93
HNRNPC-223ENST00000556142 HIST1H2AGP0C0S8 130 aaPredicted RBP9.24□□□□□ -0.93
HNRNPC-223ENST00000556142 HGFP14210 728 aa9.24□□□□□ -0.93
HNRNPC-223ENST00000556142 HOXB2P14652 356 aa9.24□□□□□ -0.93
HNRNPC-223ENST00000556142 GLULP15104 373 aa9.24□□□□□ -0.93
HNRNPC-223ENST00000556142 HIST1H2ADP20671 130 aa9.24□□□□□ -0.93
HNRNPC-223ENST00000556142 ACADLP28330 430 aa9.24□□□□□ -0.93
HNRNPC-223ENST00000556142 PGM1P36871 562 aa9.24□□□□□ -0.93
HNRNPC-223ENST00000556142 ZFP36L2P47974 494 aaKnown RBP9.24□□□□□ -0.93
HNRNPC-223ENST00000556142 CCNG1P51959 295 aa9.24□□□□□ -0.93
HNRNPC-223ENST00000556142 IRX1P78414 480 aaPredicted RBP9.24□□□□□ -0.93
HNRNPC-223ENST00000556142 PCDH1Q08174 1060 aa9.24□□□□□ -0.93
HNRNPC-223ENST00000556142 PTCHD3Q3KNS1 767 aa9.24□□□□□ -0.93
HNRNPC-223ENST00000556142 SDE2Q6IQ49 451 aa9.24□□□□□ -0.93
HNRNPC-223ENST00000556142 SCIMPQ6UWF3 145 aa9.24□□□□□ -0.93
HNRNPC-223ENST00000556142 FAM83HQ6ZRV2 1179 aaPredicted RBP9.24□□□□□ -0.93
HNRNPC-223ENST00000556142 GK5Q6ZS86 529 aa9.24□□□□□ -0.93
HNRNPC-223ENST00000556142 TRMT11Q7Z4G4 463 aaKnown RBP9.24□□□□□ -0.93
HNRNPC-223ENST00000556142 SPATA19Q7Z5L4 167 aa9.24□□□□□ -0.93
HNRNPC-223ENST00000556142 HEATR4Q86WZ0 1026 aa9.24□□□□□ -0.93
HNRNPC-223ENST00000556142 CACUL1Q86Y37 369 aa9.24□□□□□ -0.93
HNRNPC-223ENST00000556142 DDIASQ8IXT1 998 aa9.24□□□□□ -0.93
HNRNPC-223ENST00000556142 CFAP206Q8IYR0 622 aa9.24□□□□□ -0.93
HNRNPC-223ENST00000556142 SFRP1Q8N474 314 aa9.24□□□□□ -0.93
HNRNPC-223ENST00000556142 METTL6Q8TCB7 284 aa9.24□□□□□ -0.93
HNRNPC-223ENST00000556142 MCOLN3Q8TDD5 553 aa9.24□□□□□ -0.93
HNRNPC-223ENST00000556142 TMEM159Q96B96 161 aa9.24□□□□□ -0.93
HNRNPC-223ENST00000556142 HIST1H2AHQ96KK5 128 aa9.24□□□□□ -0.93
HNRNPC-223ENST00000556142 HIST1H2AJQ99878 128 aa9.24□□□□□ -0.93
HNRNPC-223ENST00000556142 H2AFJQ9BTM1 129 aa9.24□□□□□ -0.93
HNRNPC-223ENST00000556142 TRIM54Q9BYV2 358 aa9.24□□□□□ -0.93
HNRNPC-223ENST00000556142 ZCCHC2Q9C0B9 1178 aaKnown RBP9.24□□□□□ -0.93
HNRNPC-223ENST00000556142 MRGBPQ9NV56 204 aa9.24□□□□□ -0.93
HNRNPC-223ENST00000556142 FBXL12Q9NXK8 326 aa9.24□□□□□ -0.93
HNRNPC-223ENST00000556142 TMEM98Q9Y2Y6 226 aa9.24□□□□□ -0.93
HNRNPC-223ENST00000556142 RNF11Q9Y3C5 154 aa9.24□□□□□ -0.93
HNRNPC-223ENST00000556142 BOLA1Q9Y3E2 137 aa9.24□□□□□ -0.93
HNRNPC-223ENST00000556142 GPR45Q9Y5Y3 372 aa9.24□□□□□ -0.93
HNRNPC-223ENST00000556142 DNMT3AQ9Y6K1 912 aaPredicted RBP9.24□□□□□ -0.93
HNRNPC-223ENST00000556142 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.24□□□□□ -0.93
HNRNPC-223ENST00000556142 SERTM1A2A2V5 107 aa9.23□□□□□ -0.93
HNRNPC-223ENST00000556142 MGAT4DA6NG13 374 aa9.23□□□□□ -0.93
HNRNPC-223ENST00000556142 PSMD12O00232 456 aaPredicted RBP9.23□□□□□ -0.93
HNRNPC-223ENST00000556142 FBP2O00757 339 aa9.23□□□□□ -0.93
HNRNPC-223ENST00000556142 KATNA1O75449 491 aa9.23□□□□□ -0.93
HNRNPC-223ENST00000556142 CRCPO75575 148 aa9.23□□□□□ -0.93
HNRNPC-223ENST00000556142 PAK4O96013 591 aaPredicted RBP9.23□□□□□ -0.93
HNRNPC-223ENST00000556142 DNTTP04053 509 aa9.23□□□□□ -0.93
HNRNPC-223ENST00000556142 FUCA1P04066 466 aa9.23□□□□□ -0.93
HNRNPC-223ENST00000556142 EPB42P16452 691 aa9.23□□□□□ -0.93
HNRNPC-223ENST00000556142 MAPK9P45984 424 aa9.23□□□□□ -0.93
HNRNPC-223ENST00000556142 PIK3CGP48736 1102 aa9.23□□□□□ -0.93
HNRNPC-223ENST00000556142 ADPRHP54922 357 aa9.23□□□□□ -0.93
HNRNPC-223ENST00000556142 GRSF1Q12849 480 aaKnown RBP eCLIP9.23□□□□□ -0.93
HNRNPC-223ENST00000556142 GRIK2Q13002 908 aa9.23□□□□□ -0.93
HNRNPC-223ENST00000556142 CUL3Q13618 768 aa9.23□□□□□ -0.93
HNRNPC-223ENST00000556142 GTF2H3Q13889 308 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms