RNA–Protein interactions for RNA: ENST00000556083.1

ACTN1-216, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 4,674 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-216ENST00000556083 ATP6AP2O75787 350 aa10.53□□□□□ -0.72
ACTN1-216ENST00000556083 ARL6IP5O75915 188 aa10.53□□□□□ -0.72
ACTN1-216ENST00000556083 GADD45GO95257 159 aa10.53□□□□□ -0.72
ACTN1-216ENST00000556083 HNRNPA1P09651 372 aaKnown RBP eCLIP10.53□□□□□ -0.72
ACTN1-216ENST00000556083 IL7RP16871 459 aa10.53□□□□□ -0.72
ACTN1-216ENST00000556083 ATP4BP51164 291 aa10.53□□□□□ -0.72
ACTN1-216ENST00000556083 GBX2P52951 348 aaPredicted RBP10.53□□□□□ -0.72
ACTN1-216ENST00000556083 ZNF630Q2M218 657 aaPredicted RBP10.53□□□□□ -0.72
ACTN1-216ENST00000556083 REP15Q6BDI9 236 aa10.53□□□□□ -0.72
ACTN1-216ENST00000556083 CACUL1Q86Y37 369 aa10.53□□□□□ -0.72
ACTN1-216ENST00000556083 KLHL32Q96NJ5 620 aa10.53□□□□□ -0.72
ACTN1-216ENST00000556083 ANKRA2Q9H9E1 313 aa10.53□□□□□ -0.72
ACTN1-216ENST00000556083 CCDC59Q9P031 241 aaKnown RBP10.53□□□□□ -0.72
ACTN1-216ENST00000556083 VPS29Q9UBQ0 182 aa10.53□□□□□ -0.72
ACTN1-216ENST00000556083 ACSL5Q9ULC5 683 aa10.53□□□□□ -0.72
ACTN1-216ENST00000556083 PPIEQ9UNP9 301 aaKnown RBP10.53□□□□□ -0.72
ACTN1-216ENST00000556083 AGPSO00116 658 aa10.53□□□□□ -0.72
ACTN1-216ENST00000556083 APBB3O95704 486 aa10.53□□□□□ -0.72
ACTN1-216ENST00000556083 HSD3B1P14060 373 aa10.53□□□□□ -0.72
ACTN1-216ENST00000556083 HSD3B2P26439 372 aa10.53□□□□□ -0.72
ACTN1-216ENST00000556083 SLC7A1P30825 629 aa10.53□□□□□ -0.72
ACTN1-216ENST00000556083 HSPA7P48741 367 aa10.53□□□□□ -0.72
ACTN1-216ENST00000556083 CYP4F3Q08477 520 aa10.53□□□□□ -0.72
ACTN1-216ENST00000556083 RINLQ6ZS11 566 aa10.53□□□□□ -0.72
ACTN1-216ENST00000556083 TPRG1Q6ZUI0 275 aa10.53□□□□□ -0.72
ACTN1-216ENST00000556083 SYVN1Q86TM6 617 aa10.53□□□□□ -0.72
ACTN1-216ENST00000556083 C12orf40Q86WS4 652 aa10.53□□□□□ -0.72
ACTN1-216ENST00000556083 HID1Q8IV36 788 aa10.53□□□□□ -0.72
ACTN1-216ENST00000556083 BANPQ8N9N5 519 aa10.53□□□□□ -0.72
ACTN1-216ENST00000556083 LGR4Q9BXB1 951 aa10.53□□□□□ -0.72
ACTN1-216ENST00000556083 TTYH3Q9C0H2 523 aa10.53□□□□□ -0.72
ACTN1-216ENST00000556083 ACTL8Q9H568 366 aa10.53□□□□□ -0.72
ACTN1-216ENST00000556083 SUSD2Q9UGT4 822 aa10.53□□□□□ -0.72
ACTN1-216ENST00000556083 IL36AQ9UHA7 158 aa10.53□□□□□ -0.72
ACTN1-216ENST00000556083 GRIP1Q9Y3R0 1128 aa10.53□□□□□ -0.72
ACTN1-216ENST00000556083 TEX13CA0A0J9YWL9 993 aa10.52□□□□□ -0.72
ACTN1-216ENST00000556083 HCN1O60741 890 aa10.52□□□□□ -0.72
ACTN1-216ENST00000556083 SHOX2O60902 331 aaPredicted RBP10.52□□□□□ -0.72
ACTN1-216ENST00000556083 DNAJB5O75953 348 aa10.52□□□□□ -0.72
ACTN1-216ENST00000556083 LRATO95237 230 aa10.52□□□□□ -0.72
ACTN1-216ENST00000556083 CST3P01034 146 aaPredicted RBP10.52□□□□□ -0.72
ACTN1-216ENST00000556083 RPLP0P05388 317 aaKnown RBP10.52□□□□□ -0.72
ACTN1-216ENST00000556083 CDH1P12830 882 aa10.52□□□□□ -0.72
ACTN1-216ENST00000556083 ABCG1P45844 678 aa10.52□□□□□ -0.72
ACTN1-216ENST00000556083 HSF2Q03933 536 aa10.52□□□□□ -0.72
ACTN1-216ENST00000556083 RING1Q06587 406 aa10.52□□□□□ -0.72
ACTN1-216ENST00000556083 ZNF33BQ06732 778 aa10.52□□□□□ -0.72
ACTN1-216ENST00000556083 FSTL1Q12841 308 aa10.52□□□□□ -0.72
ACTN1-216ENST00000556083 CRHR2Q13324 411 aa10.52□□□□□ -0.72
ACTN1-216ENST00000556083 PAFAH1B3Q15102 231 aaKnown RBP10.52□□□□□ -0.72
ACTN1-216ENST00000556083 GRIK5Q16478 980 aa10.52□□□□□ -0.72
ACTN1-216ENST00000556083 RBM20Q5T481 1227 aaKnown RBP10.52□□□□□ -0.72
ACTN1-216ENST00000556083 CDCA2Q69YH5 1023 aaPredicted RBP10.52□□□□□ -0.72
ACTN1-216ENST00000556083 CFAP52Q8N1V2 620 aa10.52□□□□□ -0.72
ACTN1-216ENST00000556083 OR4C15Q8NGM1 316 aa10.52□□□□□ -0.72
ACTN1-216ENST00000556083 GRPEL2Q8TAA5 225 aa10.52□□□□□ -0.72
ACTN1-216ENST00000556083 KLHL6Q8WZ60 621 aa10.52□□□□□ -0.72
ACTN1-216ENST00000556083 C1orf74Q96LT6 269 aa10.52□□□□□ -0.72
ACTN1-216ENST00000556083 B3GNT5Q9BYG0 378 aa10.52□□□□□ -0.72
ACTN1-216ENST00000556083 DPEP2Q9H4A9 486 aa10.52□□□□□ -0.72
ACTN1-216ENST00000556083 ELAC1Q9H777 363 aaKnown RBP10.52□□□□□ -0.72
ACTN1-216ENST00000556083 DTLQ9NZJ0 730 aa10.52□□□□□ -0.72
ACTN1-216ENST00000556083 PTBP2Q9UKA9 531 aaKnown RBP10.52□□□□□ -0.72
ACTN1-216ENST00000556083 PDE10AQ9Y233 779 aa10.52□□□□□ -0.72
ACTN1-216ENST00000556083 POFUT2Q9Y2G5 429 aa10.52□□□□□ -0.72
ACTN1-216ENST00000556083 YIPF1Q9Y548 306 aa10.52□□□□□ -0.72
ACTN1-216ENST00000556083 A0A1W2PRB8 838 aa10.52□□□□□ -0.73
ACTN1-216ENST00000556083 RCCD1A6NED2 376 aa10.52□□□□□ -0.73
ACTN1-216ENST00000556083 FSHRP23945 695 aa10.52□□□□□ -0.73
ACTN1-216ENST00000556083 MAPK3P27361 379 aaPredicted RBP10.52□□□□□ -0.73
ACTN1-216ENST00000556083 MLLT6P55198 1093 aaPredicted RBP10.52□□□□□ -0.73
ACTN1-216ENST00000556083 AADACL2Q6P093 401 aa10.52□□□□□ -0.73
ACTN1-216ENST00000556083 TIFABQ6ZNK6 161 aa10.52□□□□□ -0.73
ACTN1-216ENST00000556083 EXOSC8Q96B26 276 aaKnown RBP10.52□□□□□ -0.73
ACTN1-216ENST00000556083 TRMT61BQ9BVS5 477 aaKnown RBP10.52□□□□□ -0.73
ACTN1-216ENST00000556083 ACAT2Q9BWD1 397 aa10.52□□□□□ -0.73
ACTN1-216ENST00000556083 ABCB10Q9NRK6 738 aa10.52□□□□□ -0.73
ACTN1-216ENST00000556083 SLC17A7Q9P2U7 560 aa10.52□□□□□ -0.73
ACTN1-216ENST00000556083 PCDHB11Q9Y5F2 797 aa10.52□□□□□ -0.73
ACTN1-216ENST00000556083 A0A1W2PPM1 405 aa10.52□□□□□ -0.73
ACTN1-216ENST00000556083 A0A1W2PRG6 482 aa10.52□□□□□ -0.73
ACTN1-216ENST00000556083 SH3PXD2BA1X283 911 aa10.52□□□□□ -0.73
ACTN1-216ENST00000556083 SLC22A1O15245 554 aa10.52□□□□□ -0.73
ACTN1-216ENST00000556083 EIF4HQ15056 248 aaKnown RBP10.52□□□□□ -0.73
ACTN1-216ENST00000556083 MAPK14Q16539 360 aa10.52□□□□□ -0.73
ACTN1-216ENST00000556083 SLC5A9Q2M3M2 681 aa10.52□□□□□ -0.73
ACTN1-216ENST00000556083 PLEKHG6Q3KR16 790 aa10.52□□□□□ -0.73
ACTN1-216ENST00000556083 LRIF1Q5T3J3 769 aa10.52□□□□□ -0.73
ACTN1-216ENST00000556083 SDHAF4Q5VUM1 108 aa10.52□□□□□ -0.73
ACTN1-216ENST00000556083 USP43Q70EL4 1123 aa10.52□□□□□ -0.73
ACTN1-216ENST00000556083 SLC29A4Q7RTT9 530 aa10.52□□□□□ -0.73
ACTN1-216ENST00000556083 TMCO2Q7Z6W1 182 aaPredicted RBP10.52□□□□□ -0.73
ACTN1-216ENST00000556083 AMIGO2Q86SJ2 522 aa10.52□□□□□ -0.73
ACTN1-216ENST00000556083 SLC9B2Q86UD5 537 aa10.52□□□□□ -0.73
ACTN1-216ENST00000556083 SLCO6A1Q86UG4 719 aa10.52□□□□□ -0.73
ACTN1-216ENST00000556083 FSTL5Q8N475 847 aaPredicted RBP10.52□□□□□ -0.73
ACTN1-216ENST00000556083 OR5T3Q8NGG3 340 aa10.52□□□□□ -0.73
ACTN1-216ENST00000556083 CD99L2Q8TCZ2 262 aa10.52□□□□□ -0.73
ACTN1-216ENST00000556083 C11orf24Q96F05 449 aaPredicted RBP10.52□□□□□ -0.73
ACTN1-216ENST00000556083 LMLNQ96KR4 655 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms