RNA–Protein interactions for RNA: ENST00000556013.2

PTCSC3-201, Transcript of papillary thyroid carcinoma susceptibility candidate 3, humanhuman

TSL 1 (best) BASIC

Gene PTCSC3, Length 571 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCSC3-201ENST00000556013 SMAD5Q99717 465 aaKnown RBP7.53□□□□□ -1.2
PTCSC3-201ENST00000556013 TSSK1BQ9BXA7 367 aa7.53□□□□□ -1.2
PTCSC3-201ENST00000556013 TLR10Q9BXR5 811 aa7.53□□□□□ -1.2
PTCSC3-201ENST00000556013 AP1M1Q9BXS5 423 aa7.53□□□□□ -1.2
PTCSC3-201ENST00000556013 TRIM55Q9BYV6 548 aa7.53□□□□□ -1.2
PTCSC3-201ENST00000556013 FAM96AQ9H5X1 160 aa7.53□□□□□ -1.2
PTCSC3-201ENST00000556013 CUEDC1Q9NWM3 386 aaPredicted RBP7.53□□□□□ -1.2
PTCSC3-201ENST00000556013 SMARCAL1Q9NZC9 954 aa7.53□□□□□ -1.2
PTCSC3-201ENST00000556013 VPS4AQ9UN37 437 aa7.53□□□□□ -1.2
PTCSC3-201ENST00000556013 SRPK3Q9UPE1 567 aa7.53□□□□□ -1.2
PTCSC3-201ENST00000556013 ASF1AQ9Y294 204 aa7.53□□□□□ -1.2
PTCSC3-201ENST00000556013 MAP4K5Q9Y4K4 846 aa7.53□□□□□ -1.2
PTCSC3-201ENST00000556013 MED13Q9UHV7 2174 aa7.53□□□□□ -1.2
PTCSC3-201ENST00000556013 NAV2Q8IVL1 2488 aa7.53□□□□□ -1.2
PTCSC3-201ENST00000556013 PTPN13Q12923 2485 aa7.52□□□□□ -1.21
PTCSC3-201ENST00000556013 ZNF106Q9H2Y7 1883 aaKnown RBP7.52□□□□□ -1.21
PTCSC3-201ENST00000556013 A0A0J9YY10 115 aa7.52□□□□□ -1.21
PTCSC3-201ENST00000556013 ARGFXA6NJG6 315 aa7.52□□□□□ -1.21
PTCSC3-201ENST00000556013 BHMG1C9JSJ3 638 aaPredicted RBP7.52□□□□□ -1.21
PTCSC3-201ENST00000556013 KPNA5O15131 536 aa7.52□□□□□ -1.21
PTCSC3-201ENST00000556013 GPC4O75487 556 aa7.52□□□□□ -1.21
PTCSC3-201ENST00000556013 KLF7O75840 302 aaPredicted RBP7.52□□□□□ -1.21
PTCSC3-201ENST00000556013 IPO13O94829 963 aaKnown RBP7.52□□□□□ -1.21
PTCSC3-201ENST00000556013 SORBS2O94875 1100 aaKnown RBP7.52□□□□□ -1.21
PTCSC3-201ENST00000556013 ALBP02768 609 aa7.52□□□□□ -1.21
PTCSC3-201ENST00000556013 PDGFAP04085 211 aa7.52□□□□□ -1.21
PTCSC3-201ENST00000556013 CHRM5P08912 532 aaPredicted RBP7.52□□□□□ -1.21
PTCSC3-201ENST00000556013 PIM1P11309 404 aaPredicted RBP7.52□□□□□ -1.21
PTCSC3-201ENST00000556013 TPH1P17752 444 aa7.52□□□□□ -1.21
PTCSC3-201ENST00000556013 RAB28P51157 221 aa7.52□□□□□ -1.21
PTCSC3-201ENST00000556013 ARSFP54793 590 aa7.52□□□□□ -1.21
PTCSC3-201ENST00000556013 MLLT10P55197 1068 aa7.52□□□□□ -1.21
PTCSC3-201ENST00000556013 RPS18P62269 152 aaKnown RBP7.52□□□□□ -1.21
PTCSC3-201ENST00000556013 DCDP81605 110 aaKnown RBP7.52□□□□□ -1.21
PTCSC3-201ENST00000556013 ABRQ12979 859 aa7.52□□□□□ -1.21
PTCSC3-201ENST00000556013 PRKG2Q13237 762 aa7.52□□□□□ -1.21
PTCSC3-201ENST00000556013 IL10RAQ13651 578 aa7.52□□□□□ -1.21
PTCSC3-201ENST00000556013 POU6F1Q14863 301 aa7.52□□□□□ -1.21
PTCSC3-201ENST00000556013 OASLQ15646 514 aaKnown RBP7.52□□□□□ -1.21
PTCSC3-201ENST00000556013 KYNUQ16719 465 aa7.52□□□□□ -1.21
PTCSC3-201ENST00000556013 AARS2Q5JTZ9 985 aaKnown RBP7.52□□□□□ -1.21
PTCSC3-201ENST00000556013 TSTD2Q5T7W7 516 aa7.52□□□□□ -1.21
PTCSC3-201ENST00000556013 LCN10Q6JVE6 187 aa7.52□□□□□ -1.21
PTCSC3-201ENST00000556013 AADACL2Q6P093 401 aa7.52□□□□□ -1.21
PTCSC3-201ENST00000556013 DRICH1Q6PGQ1 229 aaPredicted RBP7.52□□□□□ -1.21
PTCSC3-201ENST00000556013 FBXO38Q6PIJ6 1188 aa7.52□□□□□ -1.21
PTCSC3-201ENST00000556013 AFTPHQ6ULP2 937 aa7.52□□□□□ -1.21
PTCSC3-201ENST00000556013 FAM198BQ6UWH4 519 aa7.52□□□□□ -1.21
PTCSC3-201ENST00000556013 CDHR3Q6ZTQ4 885 aa7.52□□□□□ -1.21
PTCSC3-201ENST00000556013 DNAJC22Q8N4W6 341 aa7.52□□□□□ -1.21
PTCSC3-201ENST00000556013 C19orf47Q8N9M1 422 aaKnown RBP7.52□□□□□ -1.21
PTCSC3-201ENST00000556013 DNAAF3Q8N9W5 541 aa7.52□□□□□ -1.21
PTCSC3-201ENST00000556013 OR4L1Q8NH43 312 aa7.52□□□□□ -1.21
PTCSC3-201ENST00000556013 CPT1CQ8TCG5 803 aa7.52□□□□□ -1.21
PTCSC3-201ENST00000556013 ELMO1Q92556 727 aa7.52□□□□□ -1.21
PTCSC3-201ENST00000556013 N4BP2L2Q92802 583 aaPredicted RBP7.52□□□□□ -1.21
PTCSC3-201ENST00000556013 PNPLA2Q96AD5 504 aa7.52□□□□□ -1.21
PTCSC3-201ENST00000556013 ZUFSPQ96AP4 578 aa7.52□□□□□ -1.21
PTCSC3-201ENST00000556013 PPM1MQ96MI6 270 aa7.52□□□□□ -1.21
PTCSC3-201ENST00000556013 GBP5Q96PP8 586 aa7.52□□□□□ -1.21
PTCSC3-201ENST00000556013 OR2A14Q96R47 310 aa7.52□□□□□ -1.21
PTCSC3-201ENST00000556013 RUFY1Q96T51 708 aa7.52□□□□□ -1.21
PTCSC3-201ENST00000556013 TMEM121Q9BTD3 319 aa7.52□□□□□ -1.21
PTCSC3-201ENST00000556013 ETNK1Q9HBU6 452 aa7.52□□□□□ -1.21
PTCSC3-201ENST00000556013 CASS4Q9NQ75 786 aa7.52□□□□□ -1.21
PTCSC3-201ENST00000556013 IL1RAPL1Q9NZN1 696 aa7.52□□□□□ -1.21
PTCSC3-201ENST00000556013 PAK5Q9P286 719 aa7.52□□□□□ -1.21
PTCSC3-201ENST00000556013 FAM8A1Q9UBU6 413 aa7.52□□□□□ -1.21
PTCSC3-201ENST00000556013 ANAPC5Q9UJX4 755 aa7.52□□□□□ -1.21
PTCSC3-201ENST00000556013 PLCL2Q9UPR0 1127 aa7.52□□□□□ -1.21
PTCSC3-201ENST00000556013 ICKQ9UPZ9 632 aa7.52□□□□□ -1.21
PTCSC3-201ENST00000556013 PLAAQ9Y263 795 aa7.52□□□□□ -1.21
PTCSC3-201ENST00000556013 DRG1Q9Y295 367 aaKnown RBP7.52□□□□□ -1.21
PTCSC3-201ENST00000556013 PRSS21Q9Y6M0 314 aa7.52□□□□□ -1.21
PTCSC3-201ENST00000556013 HECTD1Q9ULT8 2610 aa7.52□□□□□ -1.21
PTCSC3-201ENST00000556013 PIKFYVEQ9Y2I7 2098 aa7.51□□□□□ -1.21
PTCSC3-201ENST00000556013 COL12A1Q99715 3063 aa7.51□□□□□ -1.21
PTCSC3-201ENST00000556013 CCDC162PA2VCL2 907 aa7.51□□□□□ -1.21
PTCSC3-201ENST00000556013 TARM1B6A8C7 271 aa7.51□□□□□ -1.21
PTCSC3-201ENST00000556013 PEX12O00623 359 aa7.51□□□□□ -1.21
PTCSC3-201ENST00000556013 SRPX2O60687 465 aaPredicted RBP7.51□□□□□ -1.21
PTCSC3-201ENST00000556013 DNAJB5O75953 348 aa7.51□□□□□ -1.21
PTCSC3-201ENST00000556013 OR2B3O76000 313 aa7.51□□□□□ -1.21
PTCSC3-201ENST00000556013 SLCO2B1O94956 709 aa7.51□□□□□ -1.21
PTCSC3-201ENST00000556013 S1PR4O95977 384 aa7.51□□□□□ -1.21
PTCSC3-201ENST00000556013 UGT2B7P16662 529 aa7.51□□□□□ -1.21
PTCSC3-201ENST00000556013 NR1D1P20393 614 aa7.51□□□□□ -1.21
PTCSC3-201ENST00000556013 PTGIRP43119 386 aa7.51□□□□□ -1.21
PTCSC3-201ENST00000556013 ARCN1P48444 511 aaKnown RBP7.51□□□□□ -1.21
PTCSC3-201ENST00000556013 NPY2RP49146 381 aa7.51□□□□□ -1.21
PTCSC3-201ENST00000556013 LMAN1P49257 510 aa7.51□□□□□ -1.21
PTCSC3-201ENST00000556013 TTPAP49638 278 aa7.51□□□□□ -1.21
PTCSC3-201ENST00000556013 GDF10P55107 478 aa7.51□□□□□ -1.21
PTCSC3-201ENST00000556013 CCNG2Q16589 344 aa7.51□□□□□ -1.21
PTCSC3-201ENST00000556013 FAM214AQ32MH5 1076 aa7.51□□□□□ -1.21
PTCSC3-201ENST00000556013 FASTKD1Q53R41 847 aaKnown RBP7.51□□□□□ -1.21
PTCSC3-201ENST00000556013 ZC3H12BQ5HYM0 836 aaKnown RBP7.51□□□□□ -1.21
PTCSC3-201ENST00000556013 TCTE1Q5JU00 501 aa7.51□□□□□ -1.21
PTCSC3-201ENST00000556013 PCID2Q5JVF3 399 aa7.51□□□□□ -1.21
PTCSC3-201ENST00000556013 FHL5Q5TD97 284 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms