RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 OR1D2P34982 312 aa6.85□□□□□ -1.31
TDP1-213ENST00000555880 YAP1P46937 504 aaKnown RBP6.85□□□□□ -1.31
TDP1-213ENST00000555880 GATMP50440 423 aa6.85□□□□□ -1.31
TDP1-213ENST00000555880 PRMT2P55345 433 aa6.85□□□□□ -1.31
TDP1-213ENST00000555880 GABARAPL2P60520 117 aa6.85□□□□□ -1.31
TDP1-213ENST00000555880 BCL2L1Q07817 233 aa6.85□□□□□ -1.31
TDP1-213ENST00000555880 GRSF1Q12849 480 aaKnown RBP eCLIP6.85□□□□□ -1.31
TDP1-213ENST00000555880 NFATC2Q13469 925 aa6.85□□□□□ -1.31
TDP1-213ENST00000555880 TOP3AQ13472 1001 aaPredicted RBP6.85□□□□□ -1.31
TDP1-213ENST00000555880 VEPH1Q14D04 833 aa6.85□□□□□ -1.31
TDP1-213ENST00000555880 SKIV2LQ15477 1246 aaKnown RBP6.85□□□□□ -1.31
TDP1-213ENST00000555880 ZNF829Q3KNS6 432 aaPredicted RBP6.85□□□□□ -1.31
TDP1-213ENST00000555880 GPR33Q49SQ1 333 aa6.85□□□□□ -1.31
TDP1-213ENST00000555880 SGO1Q5FBB7 561 aa6.85□□□□□ -1.31
TDP1-213ENST00000555880 ATXN7L2Q5T6C5 722 aaPredicted RBP6.85□□□□□ -1.31
TDP1-213ENST00000555880 SLC8B1Q6J4K2 584 aa6.85□□□□□ -1.31
TDP1-213ENST00000555880 RETSATQ6NUM9 610 aa6.85□□□□□ -1.31
TDP1-213ENST00000555880 FAM117BQ6P1L5 589 aa6.85□□□□□ -1.31
TDP1-213ENST00000555880 C16orf87Q6PH81 154 aa6.85□□□□□ -1.31
TDP1-213ENST00000555880 NECAB2Q7Z6G3 386 aa6.85□□□□□ -1.31
TDP1-213ENST00000555880 ITIH5Q86UX2 942 aa6.85□□□□□ -1.31
TDP1-213ENST00000555880 NPAS4Q8IUM7 802 aa6.85□□□□□ -1.31
TDP1-213ENST00000555880 ZNF548Q8NEK5 533 aaPredicted RBP6.85□□□□□ -1.31
TDP1-213ENST00000555880 OR13F1Q8NGS4 319 aa6.85□□□□□ -1.31
TDP1-213ENST00000555880 OR10A6Q8NH74 314 aa6.85□□□□□ -1.31
TDP1-213ENST00000555880 UBTD2Q8WUN7 234 aa6.85□□□□□ -1.31
TDP1-213ENST00000555880 GTF2H4Q92759 462 aa6.85□□□□□ -1.31
TDP1-213ENST00000555880 ZNF775Q96BV0 537 aaPredicted RBP6.85□□□□□ -1.31
TDP1-213ENST00000555880 HSPBAP1Q96EW2 488 aa6.85□□□□□ -1.31
TDP1-213ENST00000555880 CCDC138Q96M89 665 aa6.85□□□□□ -1.31
TDP1-213ENST00000555880 OR52E6Q96RD3 313 aa6.85□□□□□ -1.31
TDP1-213ENST00000555880 C19orf43Q9BQ61 176 aa6.85□□□□□ -1.31
TDP1-213ENST00000555880 FEM1AQ9BSK4 669 aa6.85□□□□□ -1.31
TDP1-213ENST00000555880 BEGAINQ9BUH8 593 aa6.85□□□□□ -1.31
TDP1-213ENST00000555880 C2orf49Q9BVC5 232 aaPredicted RBP6.85□□□□□ -1.31
TDP1-213ENST00000555880 TOR3AQ9H497 397 aa6.85□□□□□ -1.31
TDP1-213ENST00000555880 MAGIXQ9H6Y5 334 aa6.85□□□□□ -1.31
TDP1-213ENST00000555880 RMND5AQ9H871 391 aa6.85□□□□□ -1.31
TDP1-213ENST00000555880 ZFP14Q9HCL3 533 aa6.85□□□□□ -1.31
TDP1-213ENST00000555880 STARD7Q9NQZ5 370 aa6.85□□□□□ -1.31
TDP1-213ENST00000555880 IRAK4Q9NWZ3 460 aa6.85□□□□□ -1.31
TDP1-213ENST00000555880 ASIC5Q9NY37 505 aa6.85□□□□□ -1.31
TDP1-213ENST00000555880 USE1Q9NZ43 259 aa6.85□□□□□ -1.31
TDP1-213ENST00000555880 VAPAQ9P0L0 249 aa6.85□□□□□ -1.31
TDP1-213ENST00000555880 MTRRQ9UBK8 725 aa6.85□□□□□ -1.31
TDP1-213ENST00000555880 HEMK1Q9Y5R4 338 aaPredicted RBP6.85□□□□□ -1.31
TDP1-213ENST00000555880 SNX5Q9Y5X3 404 aa6.85□□□□□ -1.31
TDP1-213ENST00000555880 ZNF106Q9H2Y7 1883 aaKnown RBP6.85□□□□□ -1.31
TDP1-213ENST00000555880 CEP350Q5VT06 3117 aa6.85□□□□□ -1.31
TDP1-213ENST00000555880 GLYATL1P3A0A0U1RQE8 302 aa6.85□□□□□ -1.31
TDP1-213ENST00000555880 A0A0U1RQS6 177 aa6.85□□□□□ -1.31
TDP1-213ENST00000555880 TBKBP1A7MCY6 615 aa6.85□□□□□ -1.31
TDP1-213ENST00000555880 UPK1AO00322 258 aa6.85□□□□□ -1.31
TDP1-213ENST00000555880 MANBAO00462 879 aa6.85□□□□□ -1.31
TDP1-213ENST00000555880 TAPBPO15533 448 aa6.85□□□□□ -1.31
TDP1-213ENST00000555880 FZD6O60353 706 aa6.85□□□□□ -1.31
TDP1-213ENST00000555880 CBFA2T3O75081 653 aa6.85□□□□□ -1.31
TDP1-213ENST00000555880 ERN1O75460 977 aaKnown RBP6.85□□□□□ -1.31
TDP1-213ENST00000555880 STK16O75716 305 aa6.85□□□□□ -1.31
TDP1-213ENST00000555880 RSL1D1O76021 490 aaKnown RBP6.85□□□□□ -1.31
TDP1-213ENST00000555880 SEC14L2O76054 403 aa6.85□□□□□ -1.31
TDP1-213ENST00000555880 DXOO77932 396 aaKnown RBP6.85□□□□□ -1.31
TDP1-213ENST00000555880 RECQL5O94762 991 aaPredicted RBP6.85□□□□□ -1.31
TDP1-213ENST00000555880 ARHGEF15O94989 841 aa6.85□□□□□ -1.31
TDP1-213ENST00000555880 CLDN9O95484 217 aa6.85□□□□□ -1.31
TDP1-213ENST00000555880 BCL10O95999 233 aa6.85□□□□□ -1.31
TDP1-213ENST00000555880 INHAP05111 366 aa6.85□□□□□ -1.31
TDP1-213ENST00000555880 GALTP07902 379 aa6.85□□□□□ -1.31
TDP1-213ENST00000555880 HNRNPCP07910 306 aaKnown RBP eCLIP6.85□□□□□ -1.31
TDP1-213ENST00000555880 ALPIP09923 528 aa6.85□□□□□ -1.31
TDP1-213ENST00000555880 CBSLP0DN79 551 aa6.85□□□□□ -1.31
TDP1-213ENST00000555880 ACRV1P26436 265 aa6.85□□□□□ -1.31
TDP1-213ENST00000555880 GSTM2P28161 218 aa6.85□□□□□ -1.31
TDP1-213ENST00000555880 MAPK1P28482 360 aa6.85□□□□□ -1.31
TDP1-213ENST00000555880 MZF1P28698 734 aaPredicted RBP6.85□□□□□ -1.31
TDP1-213ENST00000555880 CBSP35520 551 aa6.85□□□□□ -1.31
TDP1-213ENST00000555880 PPP3CCP48454 512 aa6.85□□□□□ -1.31
TDP1-213ENST00000555880 ALDH7A1P49419 539 aaKnown RBP6.85□□□□□ -1.31
TDP1-213ENST00000555880 RAD23AP54725 363 aa6.85□□□□□ -1.31
TDP1-213ENST00000555880 C21orf59P57076 290 aa6.85□□□□□ -1.31
TDP1-213ENST00000555880 SMAD3P84022 425 aaKnown RBP6.85□□□□□ -1.31
TDP1-213ENST00000555880 PLD1Q13393 1074 aa6.85□□□□□ -1.31
TDP1-213ENST00000555880 BFSP2Q13515 415 aa6.85□□□□□ -1.31
TDP1-213ENST00000555880 ARHGEF7Q14155 803 aa6.85□□□□□ -1.31
TDP1-213ENST00000555880 PTPRRQ15256 657 aa6.85□□□□□ -1.31
TDP1-213ENST00000555880 MOGQ16653 247 aa6.85□□□□□ -1.31
TDP1-213ENST00000555880 RFX4Q33E94 735 aa6.85□□□□□ -1.31
TDP1-213ENST00000555880 FGD3Q5JSP0 725 aa6.85□□□□□ -1.31
TDP1-213ENST00000555880 SPANXN4Q5MJ08 99 aa6.85□□□□□ -1.31
TDP1-213ENST00000555880 ATG9BQ674R7 924 aa6.85□□□□□ -1.31
TDP1-213ENST00000555880 GRAMD4Q6IC98 578 aa6.85□□□□□ -1.31
TDP1-213ENST00000555880 TTC23LQ6PF05 361 aa6.85□□□□□ -1.31
TDP1-213ENST00000555880 SPESP1Q6UW49 350 aa6.85□□□□□ -1.31
TDP1-213ENST00000555880 ENPP6Q6UWR7 440 aa6.85□□□□□ -1.31
TDP1-213ENST00000555880 DNAJC14Q6Y2X3 702 aaPredicted RBP6.85□□□□□ -1.31
TDP1-213ENST00000555880 GCNT7Q6ZNI0 430 aa6.85□□□□□ -1.31
TDP1-213ENST00000555880 CHST15Q7LFX5 561 aaPredicted RBP6.85□□□□□ -1.31
TDP1-213ENST00000555880 TRIM46Q7Z4K8 759 aa6.85□□□□□ -1.31
TDP1-213ENST00000555880 R3HCC1LQ7Z5L2 792 aaKnown RBP6.85□□□□□ -1.31
TDP1-213ENST00000555880 EGFL6Q8IUX8 553 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms