RNA–Protein interactions for RNA: ENST00000555543.1

VTI1B-205, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-205ENST00000555543 POLG2Q9UHN1 485 aa19.87■□□□□ 0.77
VTI1B-205ENST00000555543 RARRES3Q9UL19 164 aa19.87■□□□□ 0.77
VTI1B-205ENST00000555543 CRYL1Q9Y2S2 319 aa19.87■□□□□ 0.77
VTI1B-205ENST00000555543 PIEZO2Q9H5I5 2752 aa19.86■□□□□ 0.77
VTI1B-205ENST00000555543 C2orf74A8MZ97 194 aa19.86■□□□□ 0.77
VTI1B-205ENST00000555543 ERVH48-1M5A8F1 160 aa19.86■□□□□ 0.77
VTI1B-205ENST00000555543 USP1O94782 785 aa19.86■□□□□ 0.77
VTI1B-205ENST00000555543 MAP4P27816 1152 aaKnown RBP19.86■□□□□ 0.77
VTI1B-205ENST00000555543 CYP4F2P78329 520 aa19.86■□□□□ 0.77
VTI1B-205ENST00000555543 ACY1Q03154 408 aa19.86■□□□□ 0.77
VTI1B-205ENST00000555543 GRB7Q14451 532 aa19.86■□□□□ 0.77
VTI1B-205ENST00000555543 MSS51Q4VC12 460 aa19.86■□□□□ 0.77
VTI1B-205ENST00000555543 PWWP2BQ6NUJ5 590 aa19.86■□□□□ 0.77
VTI1B-205ENST00000555543 TRIM73Q86UV7 250 aa19.86■□□□□ 0.77
VTI1B-205ENST00000555543 SPNS2Q8IVW8 549 aa19.86■□□□□ 0.77
VTI1B-205ENST00000555543 DENND6AQ8IWF6 608 aa19.86■□□□□ 0.77
VTI1B-205ENST00000555543 LMNTD1Q8N9Z9 388 aa19.86■□□□□ 0.77
VTI1B-205ENST00000555543 GALNT6Q8NCL4 622 aa19.86■□□□□ 0.77
VTI1B-205ENST00000555543 CFAP61Q8NHU2 1237 aa19.86■□□□□ 0.77
VTI1B-205ENST00000555543 FLVCR1-AS1Q8TAF5 88 aa19.86■□□□□ 0.77
VTI1B-205ENST00000555543 STAMBPL1Q96FJ0 436 aa19.86■□□□□ 0.77
VTI1B-205ENST00000555543 MENTQ9BUN1 341 aa19.86■□□□□ 0.77
VTI1B-205ENST00000555543 TWSG1Q9GZX9 223 aa19.86■□□□□ 0.77
VTI1B-205ENST00000555543 PDE7BQ9NP56 450 aa19.86■□□□□ 0.77
VTI1B-205ENST00000555543 KCND1Q9NSA2 647 aa19.86■□□□□ 0.77
VTI1B-205ENST00000555543 GALPQ9UBC7 116 aa19.86■□□□□ 0.77
VTI1B-205ENST00000555543 LNPEPQ9UIQ6 1025 aa19.86■□□□□ 0.77
VTI1B-205ENST00000555543 RUVBL2Q9Y230 463 aaKnown RBP19.86■□□□□ 0.77
VTI1B-205ENST00000555543 PIPSLA2A3N6 862 aa19.85■□□□□ 0.77
VTI1B-205ENST00000555543 S1PR4O95977 384 aa19.85■□□□□ 0.77
VTI1B-205ENST00000555543 ESR1P03372 595 aa19.85■□□□□ 0.77
VTI1B-205ENST00000555543 CHRM5P08912 532 aaPredicted RBP19.85■□□□□ 0.77
VTI1B-205ENST00000555543 UGT2B7P16662 529 aa19.85■□□□□ 0.77
VTI1B-205ENST00000555543 PEBP1P30086 187 aaKnown RBP19.85■□□□□ 0.77
VTI1B-205ENST00000555543 PKLRP30613 574 aa19.85■□□□□ 0.77
VTI1B-205ENST00000555543 DEKP35659 375 aaKnown RBP19.85■□□□□ 0.77
VTI1B-205ENST00000555543 STAT5AP42229 794 aa19.85■□□□□ 0.77
VTI1B-205ENST00000555543 SLC1A2P43004 574 aa19.85■□□□□ 0.77
VTI1B-205ENST00000555543 ADARP55265 1226 aaKnown RBP19.85■□□□□ 0.77
VTI1B-205ENST00000555543 TUBB4BP68371 445 aa19.85■□□□□ 0.77
VTI1B-205ENST00000555543 DR1Q01658 176 aa19.85■□□□□ 0.77
VTI1B-205ENST00000555543 DHX9Q08211 1270 aaKnown RBP19.85■□□□□ 0.77
VTI1B-205ENST00000555543 ABHD18Q0P651 414 aa19.85■□□□□ 0.77
VTI1B-205ENST00000555543 CTBP1Q13363 440 aa19.85■□□□□ 0.77
VTI1B-205ENST00000555543 TUBB2AQ13885 445 aa19.85■□□□□ 0.77
VTI1B-205ENST00000555543 MAP7Q14244 749 aa19.85■□□□□ 0.77
VTI1B-205ENST00000555543 SPESP1Q6UW49 350 aa19.85■□□□□ 0.77
VTI1B-205ENST00000555543 OTOAQ7RTW8 1153 aa19.85■□□□□ 0.77
VTI1B-205ENST00000555543 HOOK3Q86VS8 718 aa19.85■□□□□ 0.77
VTI1B-205ENST00000555543 ZNF501Q96CX3 271 aaPredicted RBP19.85■□□□□ 0.77
VTI1B-205ENST00000555543 TRAPPC9Q96Q05 1148 aa19.85■□□□□ 0.77
VTI1B-205ENST00000555543 TUBB2BQ9BVA1 445 aa19.85■□□□□ 0.77
VTI1B-205ENST00000555543 SLC12A9Q9BXP2 914 aa19.85■□□□□ 0.77
VTI1B-205ENST00000555543 FBXO6Q9NRD1 293 aaPredicted RBP19.85■□□□□ 0.77
VTI1B-205ENST00000555543 IL17BQ9UHF5 180 aa19.85■□□□□ 0.77
VTI1B-205ENST00000555543 NFS1Q9Y697 457 aa19.85■□□□□ 0.77
VTI1B-205ENST00000555543 KRT87PA6NCN2 255 aa19.84■□□□□ 0.77
VTI1B-205ENST00000555543 TTI1O43156 1089 aa19.84■□□□□ 0.77
VTI1B-205ENST00000555543 THOC5Q13769 683 aaKnown RBP19.84■□□□□ 0.77
VTI1B-205ENST00000555543 GBX1Q14549 363 aa19.84■□□□□ 0.77
VTI1B-205ENST00000555543 LONRF1Q17RB8 773 aa19.84■□□□□ 0.77
VTI1B-205ENST00000555543 PLEKHS1Q5SXH7 462 aa19.84■□□□□ 0.77
VTI1B-205ENST00000555543 CYB5D1Q6P9G0 228 aa19.84■□□□□ 0.77
VTI1B-205ENST00000555543 C6orf15Q6UXA7 325 aaPredicted RBP19.84■□□□□ 0.77
VTI1B-205ENST00000555543 UNC5DQ6UXZ4 953 aa19.84■□□□□ 0.77
VTI1B-205ENST00000555543 SYDE1Q6ZW31 735 aaPredicted RBP19.84■□□□□ 0.77
VTI1B-205ENST00000555543 DCUN1D3Q8IWE4 304 aa19.84■□□□□ 0.77
VTI1B-205ENST00000555543 ESX1Q8N693 406 aa19.84■□□□□ 0.77
VTI1B-205ENST00000555543 LINC01555Q8NAE3 123 aa19.84■□□□□ 0.77
VTI1B-205ENST00000555543 PWWP2AQ96N64 755 aa19.84■□□□□ 0.77
VTI1B-205ENST00000555543 IL17FQ96PD4 163 aa19.84■□□□□ 0.77
VTI1B-205ENST00000555543 OR2A14Q96R47 310 aa19.84■□□□□ 0.77
VTI1B-205ENST00000555543 GPN2Q9H9Y4 310 aaPredicted RBP19.84■□□□□ 0.77
VTI1B-205ENST00000555543 C20orf96Q9NUD7 363 aaPredicted RBP19.84■□□□□ 0.77
VTI1B-205ENST00000555543 INTS10Q9NVR2 710 aaKnown RBP19.84■□□□□ 0.77
VTI1B-205ENST00000555543 OR6C2Q9NZP2 312 aa19.84■□□□□ 0.77
VTI1B-205ENST00000555543 TSR3Q9UJK0 312 aaKnown RBP19.84■□□□□ 0.77
VTI1B-205ENST00000555543 H3BMM5 538 aa19.83■□□□□ 0.77
VTI1B-205ENST00000555543 KPNA5O15131 536 aa19.83■□□□□ 0.77
VTI1B-205ENST00000555543 PFDN6O15212 129 aa19.83■□□□□ 0.77
VTI1B-205ENST00000555543 PRB1P04280 392 aa19.83■□□□□ 0.77
VTI1B-205ENST00000555543 PKMP14618 531 aaKnown RBP19.83■□□□□ 0.77
VTI1B-205ENST00000555543 PGAM1P18669 254 aa19.83■□□□□ 0.77
VTI1B-205ENST00000555543 F8A1P23610 371 aa19.83■□□□□ 0.77
VTI1B-205ENST00000555543 PAFAH1B1P43034 410 aa19.83■□□□□ 0.77
VTI1B-205ENST00000555543 CRYMQ14894 314 aa19.83■□□□□ 0.77
VTI1B-205ENST00000555543 KYNUQ16719 465 aa19.83■□□□□ 0.77
VTI1B-205ENST00000555543 TMTC4Q5T4D3 741 aa19.83■□□□□ 0.77
VTI1B-205ENST00000555543 ZNF549Q6P9A3 640 aa19.83■□□□□ 0.77
VTI1B-205ENST00000555543 PCGF5Q86SE9 256 aa19.83■□□□□ 0.77
VTI1B-205ENST00000555543 IGDCC3Q8IVU1 814 aa19.83■□□□□ 0.77
VTI1B-205ENST00000555543 ZSCAN1Q8NBB4 408 aa19.83■□□□□ 0.77
VTI1B-205ENST00000555543 SERBP1Q8NC51 408 aaKnown RBP eCLIP19.83■□□□□ 0.77
VTI1B-205ENST00000555543 SLC39A7Q92504 469 aa19.83■□□□□ 0.77
VTI1B-205ENST00000555543 RUNDC3BQ96NL0 473 aa19.83■□□□□ 0.77
VTI1B-205ENST00000555543 WDR83Q9BRX9 315 aaKnown RBP19.83■□□□□ 0.77
VTI1B-205ENST00000555543 MED16Q9Y2X0 877 aa19.83■□□□□ 0.77
VTI1B-205ENST00000555543 FAM169AQ9Y6X4 670 aa19.83■□□□□ 0.77
VTI1B-205ENST00000555543 CCDC188H7C350 402 aa19.82■□□□□ 0.76
VTI1B-205ENST00000555543 TP73O15350 636 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms