RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 PTRHD1Q6GMV3 140 aaKnown RBP9.66□□□□□ -0.86
PSEN1-213ENST00000555386 MRNIPQ6NTE8 343 aa9.66□□□□□ -0.86
PSEN1-213ENST00000555386 PIP4P1Q86T03 277 aa9.66□□□□□ -0.86
PSEN1-213ENST00000555386 AMZ2Q86W34 360 aa9.66□□□□□ -0.86
PSEN1-213ENST00000555386 KCNMB4Q86W47 210 aa9.66□□□□□ -0.86
PSEN1-213ENST00000555386 SLC35F3Q8IY50 421 aa9.66□□□□□ -0.86
PSEN1-213ENST00000555386 CFAP206Q8IYR0 622 aa9.66□□□□□ -0.86
PSEN1-213ENST00000555386 ENDOVQ8N8Q3 282 aaKnown RBP9.66□□□□□ -0.86
PSEN1-213ENST00000555386 DTX3LQ8TDB6 740 aa9.66□□□□□ -0.86
PSEN1-213ENST00000555386 SREK1Q8WXA9 508 aaKnown RBP9.66□□□□□ -0.86
PSEN1-213ENST00000555386 PEX13Q92968 403 aa9.66□□□□□ -0.86
PSEN1-213ENST00000555386 GLMNQ92990 594 aa9.66□□□□□ -0.86
PSEN1-213ENST00000555386 C19orf43Q9BQ61 176 aa9.66□□□□□ -0.86
PSEN1-213ENST00000555386 RTKNQ9BST9 563 aa9.66□□□□□ -0.86
PSEN1-213ENST00000555386 MECRQ9BV79 373 aa9.66□□□□□ -0.86
PSEN1-213ENST00000555386 SARS2Q9NP81 518 aaKnown RBP9.66□□□□□ -0.86
PSEN1-213ENST00000555386 TBC1D29Q9UFV1 150 aa9.66□□□□□ -0.86
PSEN1-213ENST00000555386 MCM8Q9UJA3 840 aa9.66□□□□□ -0.86
PSEN1-213ENST00000555386 TSR3Q9UJK0 312 aaKnown RBP9.66□□□□□ -0.86
PSEN1-213ENST00000555386 MID2Q9UJV3 735 aa9.66□□□□□ -0.86
PSEN1-213ENST00000555386 EMCNQ9ULC0 261 aa9.66□□□□□ -0.86
PSEN1-213ENST00000555386 CRYL1Q9Y2S2 319 aa9.66□□□□□ -0.86
PSEN1-213ENST00000555386 CSNK1G3Q9Y6M4 447 aa9.66□□□□□ -0.86
PSEN1-213ENST00000555386 AGAP14A8MT82 685 aa9.65□□□□□ -0.87
PSEN1-213ENST00000555386 CAPN14A8MX76 684 aa9.65□□□□□ -0.87
PSEN1-213ENST00000555386 TM4SF5O14894 197 aa9.65□□□□□ -0.87
PSEN1-213ENST00000555386 SGTAO43765 313 aa9.65□□□□□ -0.87
PSEN1-213ENST00000555386 CBFA2T3O75081 653 aa9.65□□□□□ -0.87
PSEN1-213ENST00000555386 KCNK5O95279 499 aa9.65□□□□□ -0.87
PSEN1-213ENST00000555386 SERPINA6P08185 405 aa9.65□□□□□ -0.87
PSEN1-213ENST00000555386 ESRRAP11474 423 aaPredicted RBP9.65□□□□□ -0.87
PSEN1-213ENST00000555386 FGF3P11487 239 aaPredicted RBP9.65□□□□□ -0.87
PSEN1-213ENST00000555386 VCLP18206 1134 aa9.65□□□□□ -0.87
PSEN1-213ENST00000555386 PPARGP37231 505 aaPredicted RBP9.65□□□□□ -0.87
PSEN1-213ENST00000555386 NSG1P42857 185 aa9.65□□□□□ -0.87
PSEN1-213ENST00000555386 SLC1A2P43004 574 aa9.65□□□□□ -0.87
PSEN1-213ENST00000555386 TTPAP49638 278 aa9.65□□□□□ -0.87
PSEN1-213ENST00000555386 PRKAA2P54646 552 aa9.65□□□□□ -0.87
PSEN1-213ENST00000555386 MPP1Q00013 466 aa9.65□□□□□ -0.87
PSEN1-213ENST00000555386 BOP1Q14137 746 aaKnown RBP9.65□□□□□ -0.87
PSEN1-213ENST00000555386 NR0B2Q15466 257 aa9.65□□□□□ -0.87
PSEN1-213ENST00000555386 ZNF789Q5FWF6 425 aa9.65□□□□□ -0.87
PSEN1-213ENST00000555386 PPM1JQ5JR12 505 aa9.65□□□□□ -0.87
PSEN1-213ENST00000555386 TEDDM1Q5T9Z0 273 aa9.65□□□□□ -0.87
PSEN1-213ENST00000555386 LYPLAL1Q5VWZ2 237 aa9.65□□□□□ -0.87
PSEN1-213ENST00000555386 ZCCHC8Q6NZY4 707 aaKnown RBP9.65□□□□□ -0.87
PSEN1-213ENST00000555386 GUSBP11Q6P575 273 aa9.65□□□□□ -0.87
PSEN1-213ENST00000555386 CERS6Q6ZMG9 384 aa9.65□□□□□ -0.87
PSEN1-213ENST00000555386 DBX2Q6ZNG2 339 aa9.65□□□□□ -0.87
PSEN1-213ENST00000555386 FAM83HQ6ZRV2 1179 aaPredicted RBP9.65□□□□□ -0.87
PSEN1-213ENST00000555386 C11orf96Q7Z7L8 435 aa9.65□□□□□ -0.87
PSEN1-213ENST00000555386 ZNF761Q86XN6 746 aaPredicted RBP9.65□□□□□ -0.87
PSEN1-213ENST00000555386 LILRA3Q8N6C8 439 aaPredicted RBP9.65□□□□□ -0.87
PSEN1-213ENST00000555386 Q8N9G6 341 aaPredicted RBP9.65□□□□□ -0.87
PSEN1-213ENST00000555386 PIWIL2Q8TC59 973 aaKnown RBP9.65□□□□□ -0.87
PSEN1-213ENST00000555386 PPP4R1Q8TF05 950 aa9.65□□□□□ -0.87
PSEN1-213ENST00000555386 HEXDCQ8WVB3 486 aa9.65□□□□□ -0.87
PSEN1-213ENST00000555386 ELMO1Q92556 727 aa9.65□□□□□ -0.87
PSEN1-213ENST00000555386 CDC6Q99741 560 aa9.65□□□□□ -0.87
PSEN1-213ENST00000555386 MCMBPQ9BTE3 642 aa9.65□□□□□ -0.87
PSEN1-213ENST00000555386 DUSP23Q9BVJ7 150 aa9.65□□□□□ -0.87
PSEN1-213ENST00000555386 RNPEPL1Q9HAU8 725 aa9.65□□□□□ -0.87
PSEN1-213ENST00000555386 SNX15Q9NRS6 342 aa9.65□□□□□ -0.87
PSEN1-213ENST00000555386 ARL8BQ9NVJ2 186 aa9.65□□□□□ -0.87
PSEN1-213ENST00000555386 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.65□□□□□ -0.87
PSEN1-213ENST00000555386 COPG2Q9UBF2 871 aa9.65□□□□□ -0.87
PSEN1-213ENST00000555386 C15orf41Q9Y2V0 281 aa9.65□□□□□ -0.87
PSEN1-213ENST00000555386 PSAT1Q9Y617 370 aa9.65□□□□□ -0.87
PSEN1-213ENST00000555386 CFAP20Q9Y6A4 193 aaKnown RBP9.65□□□□□ -0.87
PSEN1-213ENST00000555386 IGLV3-16A0A075B6K0 115 aa9.64□□□□□ -0.87
PSEN1-213ENST00000555386 OR52A4PA6NMU1 304 aa9.64□□□□□ -0.87
PSEN1-213ENST00000555386 A8MUI8 341 aa9.64□□□□□ -0.87
PSEN1-213ENST00000555386 TMEM114B3SHH9 223 aa9.64□□□□□ -0.87
PSEN1-213ENST00000555386 GPR89AB7ZAQ6 455 aa9.64□□□□□ -0.87
PSEN1-213ENST00000555386 CASC3O15234 703 aaKnown RBP9.64□□□□□ -0.87
PSEN1-213ENST00000555386 GYG2O15488 501 aa9.64□□□□□ -0.87
PSEN1-213ENST00000555386 GSC2O15499 205 aa9.64□□□□□ -0.87
PSEN1-213ENST00000555386 ANP32DO95626 131 aa9.64□□□□□ -0.87
PSEN1-213ENST00000555386 OR56A5P0C7T3 313 aa9.64□□□□□ -0.87
PSEN1-213ENST00000555386 GPR89BP0CG08 455 aa9.64□□□□□ -0.87
PSEN1-213ENST00000555386 ALOX15P16050 662 aaPredicted RBP9.64□□□□□ -0.87
PSEN1-213ENST00000555386 PREPP48147 710 aa9.64□□□□□ -0.87
PSEN1-213ENST00000555386 SLC1A6P48664 564 aa9.64□□□□□ -0.87
PSEN1-213ENST00000555386 PRLHRP49683 370 aa9.64□□□□□ -0.87
PSEN1-213ENST00000555386 CLCNKAP51800 687 aa9.64□□□□□ -0.87
PSEN1-213ENST00000555386 HK2P52789 917 aa9.64□□□□□ -0.87
PSEN1-213ENST00000555386 AQP5P55064 265 aa9.64□□□□□ -0.87
PSEN1-213ENST00000555386 CLDN6P56747 220 aa9.64□□□□□ -0.87
PSEN1-213ENST00000555386 LRP8Q14114 963 aa9.64□□□□□ -0.87
PSEN1-213ENST00000555386 PUM1Q14671 1186 aaKnown RBP eCLIP9.64□□□□□ -0.87
PSEN1-213ENST00000555386 PCLAFQ15004 111 aa9.64□□□□□ -0.87
PSEN1-213ENST00000555386 PROX2Q3B8N5 592 aa9.64□□□□□ -0.87
PSEN1-213ENST00000555386 SYTL3Q4VX76 610 aa9.64□□□□□ -0.87
PSEN1-213ENST00000555386 EFL1Q7Z2Z2 1120 aaKnown RBP9.64□□□□□ -0.87
PSEN1-213ENST00000555386 STRA8Q7Z7C7 330 aa9.64□□□□□ -0.87
PSEN1-213ENST00000555386 CLEC14AQ86T13 490 aa9.64□□□□□ -0.87
PSEN1-213ENST00000555386 CILP2Q8IUL8 1156 aa9.64□□□□□ -0.87
PSEN1-213ENST00000555386 SPNS2Q8IVW8 549 aa9.64□□□□□ -0.87
PSEN1-213ENST00000555386 TRIM48Q8IWZ4 208 aa9.64□□□□□ -0.87
PSEN1-213ENST00000555386 ARL10Q8N8L6 244 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms