RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 BIRC2Q13490 618 aa12.33□□□□□ -0.44
SYNE2-219ENST00000555323 KRT33BQ14525 404 aa12.33□□□□□ -0.44
SYNE2-219ENST00000555323 CASP8Q14790 479 aa12.33□□□□□ -0.44
SYNE2-219ENST00000555323 CLPPQ16740 277 aaPredicted RBP12.33□□□□□ -0.44
SYNE2-219ENST00000555323 TNFAIP8L3Q5GJ75 292 aa12.33□□□□□ -0.44
SYNE2-219ENST00000555323 TTC23LQ6PF05 361 aa12.33□□□□□ -0.44
SYNE2-219ENST00000555323 FBXO38Q6PIJ6 1188 aa12.33□□□□□ -0.44
SYNE2-219ENST00000555323 SPRED1Q7Z699 444 aa12.33□□□□□ -0.44
SYNE2-219ENST00000555323 TBC1D1Q86TI0 1168 aaPredicted RBP12.33□□□□□ -0.44
SYNE2-219ENST00000555323 ISCA2Q86U28 154 aa12.33□□□□□ -0.44
SYNE2-219ENST00000555323 CENPLQ8N0S6 344 aaPredicted RBP12.33□□□□□ -0.44
SYNE2-219ENST00000555323 OR52E1Q8NGJ3 308 aa12.33□□□□□ -0.44
SYNE2-219ENST00000555323 CFAP61Q8NHU2 1237 aa12.33□□□□□ -0.44
SYNE2-219ENST00000555323 WDR48Q8TAF3 677 aa12.33□□□□□ -0.44
SYNE2-219ENST00000555323 HMGCLL1Q8TB92 370 aa12.33□□□□□ -0.44
SYNE2-219ENST00000555323 CCDC74AQ96AQ1 378 aa12.33□□□□□ -0.44
SYNE2-219ENST00000555323 GPR78Q96P69 363 aa12.33□□□□□ -0.44
SYNE2-219ENST00000555323 CCDC3Q9BQI4 270 aa12.33□□□□□ -0.44
SYNE2-219ENST00000555323 RAB33BQ9H082 229 aa12.33□□□□□ -0.44
SYNE2-219ENST00000555323 RDH14Q9HBH5 336 aa12.33□□□□□ -0.44
SYNE2-219ENST00000555323 PARVBQ9HBI1 364 aa12.33□□□□□ -0.44
SYNE2-219ENST00000555323 IGSF5Q9NSI5 407 aa12.33□□□□□ -0.44
SYNE2-219ENST00000555323 CTNNAL1Q9UBT7 734 aa12.33□□□□□ -0.44
SYNE2-219ENST00000555323 TBK1Q9UHD2 729 aa12.33□□□□□ -0.44
SYNE2-219ENST00000555323 IKZF3Q9UKT9 509 aa12.33□□□□□ -0.44
SYNE2-219ENST00000555323 GOLGA4Q13439 2230 aaKnown RBP12.33□□□□□ -0.44
SYNE2-219ENST00000555323 IGHV1OR21-1A0A087WYE8 117 aa12.32□□□□□ -0.44
SYNE2-219ENST00000555323 A0A1W2PQM1 296 aa12.32□□□□□ -0.44
SYNE2-219ENST00000555323 TLDC2A0PJX2 215 aa12.32□□□□□ -0.44
SYNE2-219ENST00000555323 MYO1CO00159 1063 aa12.32□□□□□ -0.44
SYNE2-219ENST00000555323 NTN3O00634 580 aaPredicted RBP12.32□□□□□ -0.44
SYNE2-219ENST00000555323 KDM1AO60341 852 aa12.32□□□□□ -0.44
SYNE2-219ENST00000555323 KLHL2O95198 593 aa12.32□□□□□ -0.44
SYNE2-219ENST00000555323 KCNK5O95279 499 aa12.32□□□□□ -0.44
SYNE2-219ENST00000555323 ENO2P09104 434 aaPredicted RBP12.32□□□□□ -0.44
SYNE2-219ENST00000555323 LTA4HP09960 611 aaKnown RBP12.32□□□□□ -0.44
SYNE2-219ENST00000555323 CD1CP29017 333 aa12.32□□□□□ -0.44
SYNE2-219ENST00000555323 ALDH4A1P30038 563 aa12.32□□□□□ -0.44
SYNE2-219ENST00000555323 OR1D5P58170 312 aa12.32□□□□□ -0.44
SYNE2-219ENST00000555323 CSHL1Q14406 222 aa12.32□□□□□ -0.44
SYNE2-219ENST00000555323 ACAP2Q15057 778 aa12.32□□□□□ -0.44
SYNE2-219ENST00000555323 FAM83EQ2M2I3 478 aa12.32□□□□□ -0.44
SYNE2-219ENST00000555323 TAF1BQ53T94 588 aaPredicted RBP12.32□□□□□ -0.44
SYNE2-219ENST00000555323 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.32□□□□□ -0.44
SYNE2-219ENST00000555323 SBSNQ6UWP8 590 aa12.32□□□□□ -0.44
SYNE2-219ENST00000555323 UBE2R2Q712K3 238 aaPredicted RBP12.32□□□□□ -0.44
SYNE2-219ENST00000555323 CLEC14AQ86T13 490 aa12.32□□□□□ -0.44
SYNE2-219ENST00000555323 SLCO6A1Q86UG4 719 aa12.32□□□□□ -0.44
SYNE2-219ENST00000555323 LCA5Q86VQ0 697 aa12.32□□□□□ -0.44
SYNE2-219ENST00000555323 OR9A1PQ8NGU1 263 aa12.32□□□□□ -0.44
SYNE2-219ENST00000555323 RHEBL1Q8TAI7 183 aa12.32□□□□□ -0.44
SYNE2-219ENST00000555323 MCOLN3Q8TDD5 553 aa12.32□□□□□ -0.44
SYNE2-219ENST00000555323 KIAA1191Q96A73 305 aa12.32□□□□□ -0.44
SYNE2-219ENST00000555323 NXNL1Q96CM4 212 aa12.32□□□□□ -0.44
SYNE2-219ENST00000555323 TBC1D10AQ9BXI6 508 aa12.32□□□□□ -0.44
SYNE2-219ENST00000555323 LRRN3Q9H3W5 708 aa12.32□□□□□ -0.44
SYNE2-219ENST00000555323 NMRAL1Q9HBL8 299 aa12.32□□□□□ -0.44
SYNE2-219ENST00000555323 KCNK4Q9NYG8 393 aa12.32□□□□□ -0.44
SYNE2-219ENST00000555323 OR6C2Q9NZP2 312 aa12.32□□□□□ -0.44
SYNE2-219ENST00000555323 ADAMTS6Q9UKP5 1117 aa12.32□□□□□ -0.44
SYNE2-219ENST00000555323 RUVBL2Q9Y230 463 aaKnown RBP12.32□□□□□ -0.44
SYNE2-219ENST00000555323 PDE10AQ9Y233 779 aa12.32□□□□□ -0.44
SYNE2-219ENST00000555323 WDR87Q6ZQQ6 2873 aa12.32□□□□□ -0.44
SYNE2-219ENST00000555323 PIEZO1Q92508 2521 aa12.31□□□□□ -0.44
SYNE2-219ENST00000555323 A0A1W2PPM1 405 aa12.31□□□□□ -0.44
SYNE2-219ENST00000555323 CDC7O00311 574 aa12.31□□□□□ -0.44
SYNE2-219ENST00000555323 RFPL3O75679 317 aa12.31□□□□□ -0.44
SYNE2-219ENST00000555323 UBXN7O94888 489 aa12.31□□□□□ -0.44
SYNE2-219ENST00000555323 MT-ND3P03897 115 aa12.31□□□□□ -0.44
SYNE2-219ENST00000555323 ERGP11308 486 aa12.31□□□□□ -0.44
SYNE2-219ENST00000555323 CYP2A7P20853 494 aa12.31□□□□□ -0.44
SYNE2-219ENST00000555323 MAP4P27816 1152 aaKnown RBP12.31□□□□□ -0.44
SYNE2-219ENST00000555323 SHMT2P34897 504 aa12.31□□□□□ -0.44
SYNE2-219ENST00000555323 GMPRP36959 345 aa12.31□□□□□ -0.44
SYNE2-219ENST00000555323 HSD17B2P37059 387 aa12.31□□□□□ -0.44
SYNE2-219ENST00000555323 RAB28P51157 221 aa12.31□□□□□ -0.44
SYNE2-219ENST00000555323 NOVA1P51513 510 aaKnown RBP12.31□□□□□ -0.44
SYNE2-219ENST00000555323 AP1S2P56377 157 aa12.31□□□□□ -0.44
SYNE2-219ENST00000555323 CDKL1Q00532 357 aa12.31□□□□□ -0.44
SYNE2-219ENST00000555323 SLC18A2Q05940 514 aa12.31□□□□□ -0.44
SYNE2-219ENST00000555323 ARHGAP19Q14CB8 494 aa12.31□□□□□ -0.44
SYNE2-219ENST00000555323 CYP2A13Q16696 494 aa12.31□□□□□ -0.44
SYNE2-219ENST00000555323 PPP1R3AQ16821 1122 aa12.31□□□□□ -0.44
SYNE2-219ENST00000555323 CCSMST1Q4G0I0 132 aa12.31□□□□□ -0.44
SYNE2-219ENST00000555323 CDKL4Q5MAI5 379 aa12.31□□□□□ -0.44
SYNE2-219ENST00000555323 ADAMTSL2Q86TH1 951 aa12.31□□□□□ -0.44
SYNE2-219ENST00000555323 AMIGO1Q86WK6 493 aa12.31□□□□□ -0.44
SYNE2-219ENST00000555323 ZNF761Q86XN6 746 aaPredicted RBP12.31□□□□□ -0.44
SYNE2-219ENST00000555323 CACTIN-AS1Q8N1I8 211 aa12.31□□□□□ -0.44
SYNE2-219ENST00000555323 PLD6Q8N2A8 252 aaKnown RBP12.31□□□□□ -0.44
SYNE2-219ENST00000555323 SPATA6LQ8N4H0 392 aa12.31□□□□□ -0.44
SYNE2-219ENST00000555323 OR4E2Q8NGC2 313 aa12.31□□□□□ -0.44
SYNE2-219ENST00000555323 OR10G6Q8NH81 332 aa12.31□□□□□ -0.44
SYNE2-219ENST00000555323 STAG3L4Q8TBR4 150 aa12.31□□□□□ -0.44
SYNE2-219ENST00000555323 DENND1AQ8TEH3 1009 aa12.31□□□□□ -0.44
SYNE2-219ENST00000555323 KCTD4Q8WVF5 259 aa12.31□□□□□ -0.44
SYNE2-219ENST00000555323 LCN9Q8WX39 176 aa12.31□□□□□ -0.44
SYNE2-219ENST00000555323 PTERQ96BW5 349 aa12.31□□□□□ -0.44
SYNE2-219ENST00000555323 CCDC138Q96M89 665 aa12.31□□□□□ -0.44
SYNE2-219ENST00000555323 PKP4Q99569 1192 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms