RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 DEFB133Q30KQ1 61 aa10.49□□□□□ -0.73
TDP1-211ENST00000555178 HLA-BQ31612 363 aa10.49□□□□□ -0.73
TDP1-211ENST00000555178 CGB2Q6NT52 195 aa10.49□□□□□ -0.73
TDP1-211ENST00000555178 C11orf74Q86VG3 221 aa10.49□□□□□ -0.73
TDP1-211ENST00000555178 ZNF548Q8NEK5 533 aaPredicted RBP10.49□□□□□ -0.73
TDP1-211ENST00000555178 OR6Y1Q8NGX8 325 aa10.49□□□□□ -0.73
TDP1-211ENST00000555178 TAAR2Q9P1P5 351 aa10.49□□□□□ -0.73
TDP1-211ENST00000555178 OARD1Q9Y530 152 aa10.49□□□□□ -0.73
TDP1-211ENST00000555178 CFAP54Q96N23 3096 aa10.49□□□□□ -0.73
TDP1-211ENST00000555178 F8W8V4 182 aa10.49□□□□□ -0.73
TDP1-211ENST00000555178 GFYI3L273 518 aa10.49□□□□□ -0.73
TDP1-211ENST00000555178 PPP6CO00743 305 aa10.49□□□□□ -0.73
TDP1-211ENST00000555178 TOR1BO14657 336 aa10.49□□□□□ -0.73
TDP1-211ENST00000555178 YY2O15391 372 aa10.49□□□□□ -0.73
TDP1-211ENST00000555178 PIAS2O75928 621 aa10.49□□□□□ -0.73
TDP1-211ENST00000555178 GSTM1P09488 218 aa10.49□□□□□ -0.73
TDP1-211ENST00000555178 MPC1LP0DKB6 136 aa10.49□□□□□ -0.73
TDP1-211ENST00000555178 PRKAA2P54646 552 aa10.49□□□□□ -0.73
TDP1-211ENST00000555178 GSTM4Q03013 218 aa10.49□□□□□ -0.73
TDP1-211ENST00000555178 GRB7Q14451 532 aa10.49□□□□□ -0.73
TDP1-211ENST00000555178 PLA2G2CQ5R387 149 aa10.49□□□□□ -0.73
TDP1-211ENST00000555178 CAPRIN2Q6IMN6 1127 aaKnown RBP10.49□□□□□ -0.73
TDP1-211ENST00000555178 KANSL1Q7Z3B3 1105 aa10.49□□□□□ -0.73
TDP1-211ENST00000555178 TAF8Q7Z7C8 310 aa10.49□□□□□ -0.73
TDP1-211ENST00000555178 NAGSQ8N159 534 aa10.49□□□□□ -0.73
TDP1-211ENST00000555178 FBXO39Q8N4B4 442 aa10.49□□□□□ -0.73
TDP1-211ENST00000555178 PPP1R14CQ8TAE6 165 aa10.49□□□□□ -0.73
TDP1-211ENST00000555178 AGR3Q8TD06 166 aa10.49□□□□□ -0.73
TDP1-211ENST00000555178 TRNAU1APQ9NX07 287 aaKnown RBP10.49□□□□□ -0.73
TDP1-211ENST00000555178 HEATR5BQ9P2D3 2071 aa10.48□□□□□ -0.73
TDP1-211ENST00000555178 UNC13CQ8NB66 2214 aa10.48□□□□□ -0.73
TDP1-211ENST00000555178 A0A1B0GTL3 188 aa10.48□□□□□ -0.73
TDP1-211ENST00000555178 PDZK1P1A8MUH7 402 aa10.48□□□□□ -0.73
TDP1-211ENST00000555178 EIF3FO00303 357 aaPredicted RBP10.48□□□□□ -0.73
TDP1-211ENST00000555178 TAPBPO15533 448 aa10.48□□□□□ -0.73
TDP1-211ENST00000555178 SMIM24O75264 130 aa10.48□□□□□ -0.73
TDP1-211ENST00000555178 PSIP1O75475 530 aaKnown RBP10.48□□□□□ -0.73
TDP1-211ENST00000555178 CTSEP14091 401 aa10.48□□□□□ -0.73
TDP1-211ENST00000555178 GNSP15586 552 aa10.48□□□□□ -0.73
TDP1-211ENST00000555178 EEF1DP29692 281 aaKnown RBP10.48□□□□□ -0.73
TDP1-211ENST00000555178 GDF5P43026 501 aa10.48□□□□□ -0.73
TDP1-211ENST00000555178 RPIAP49247 311 aa10.48□□□□□ -0.73
TDP1-211ENST00000555178 CDH13P55290 713 aa10.48□□□□□ -0.73
TDP1-211ENST00000555178 DUOXA1Q1HG43 343 aa10.48□□□□□ -0.73
TDP1-211ENST00000555178 ZNF678Q5SXM1 525 aa10.48□□□□□ -0.73
TDP1-211ENST00000555178 PDZD3Q86UT5 571 aa10.48□□□□□ -0.73
TDP1-211ENST00000555178 ZNF761Q86XN6 746 aaPredicted RBP10.48□□□□□ -0.73
TDP1-211ENST00000555178 DCP2Q8IU60 420 aaKnown RBP10.48□□□□□ -0.73
TDP1-211ENST00000555178 CHMP6Q96FZ7 201 aa10.48□□□□□ -0.73
TDP1-211ENST00000555178 IL17FQ96PD4 163 aa10.48□□□□□ -0.73
TDP1-211ENST00000555178 SORT1Q99523 831 aa10.48□□□□□ -0.73
TDP1-211ENST00000555178 ELF4Q99607 663 aaPredicted RBP10.48□□□□□ -0.73
TDP1-211ENST00000555178 EGFL8Q99944 293 aa10.48□□□□□ -0.73
TDP1-211ENST00000555178 TMEM79Q9BSE2 394 aa10.48□□□□□ -0.73
TDP1-211ENST00000555178 SLC12A9Q9BXP2 914 aa10.48□□□□□ -0.73
TDP1-211ENST00000555178 GAREM1Q9H706 876 aa10.48□□□□□ -0.73
TDP1-211ENST00000555178 TNFRSF12AQ9NP84 129 aa10.48□□□□□ -0.73
TDP1-211ENST00000555178 PARD6AQ9NPB6 346 aa10.48□□□□□ -0.73
TDP1-211ENST00000555178 ARL15Q9NXU5 204 aa10.48□□□□□ -0.73
TDP1-211ENST00000555178 MARCOQ9UEW3 520 aaPredicted RBP10.48□□□□□ -0.73
TDP1-211ENST00000555178 MID2Q9UJV3 735 aa10.48□□□□□ -0.73
TDP1-211ENST00000555178 DNMT3AQ9Y6K1 912 aaPredicted RBP10.48□□□□□ -0.73
TDP1-211ENST00000555178 SYCE1LA8MT33 242 aa10.48□□□□□ -0.73
TDP1-211ENST00000555178 KLK8O60259 260 aa10.48□□□□□ -0.73
TDP1-211ENST00000555178 SNNO75324 88 aaPredicted RBP10.48□□□□□ -0.73
TDP1-211ENST00000555178 SERPINE1P05121 402 aa10.48□□□□□ -0.73
TDP1-211ENST00000555178 VCLP18206 1134 aa10.48□□□□□ -0.73
TDP1-211ENST00000555178 DRD4P21917 467 aa10.48□□□□□ -0.73
TDP1-211ENST00000555178 SLC19A1P41440 591 aa10.48□□□□□ -0.73
TDP1-211ENST00000555178 HSPA7P48741 367 aa10.48□□□□□ -0.73
TDP1-211ENST00000555178 YBX1P67809 324 aaKnown RBP10.48□□□□□ -0.73
TDP1-211ENST00000555178 NFKB2Q00653 900 aa10.48□□□□□ -0.73
TDP1-211ENST00000555178 OCRLQ01968 901 aa10.48□□□□□ -0.73
TDP1-211ENST00000555178 STX3Q13277 289 aa10.48□□□□□ -0.73
TDP1-211ENST00000555178 RPE65Q16518 533 aa10.48□□□□□ -0.73
TDP1-211ENST00000555178 UNC50Q53HI1 259 aa10.48□□□□□ -0.73
TDP1-211ENST00000555178 SLC23A3Q6PIS1 610 aa10.48□□□□□ -0.73
TDP1-211ENST00000555178 RGS9BPQ6ZS82 235 aa10.48□□□□□ -0.73
TDP1-211ENST00000555178 NEK10Q6ZWH5 1172 aa10.48□□□□□ -0.73
TDP1-211ENST00000555178 LSMEM2Q8N112 164 aa10.48□□□□□ -0.73
TDP1-211ENST00000555178 C2orf73Q8N5S3 287 aaPredicted RBP10.48□□□□□ -0.73
TDP1-211ENST00000555178 PDPRQ8NCN5 879 aa10.48□□□□□ -0.73
TDP1-211ENST00000555178 PPFIBP2Q8ND30 876 aa10.48□□□□□ -0.73
TDP1-211ENST00000555178 FAM46DQ8NEK8 389 aa10.48□□□□□ -0.73
TDP1-211ENST00000555178 ATOH1Q92858 354 aaPredicted RBP10.48□□□□□ -0.73
TDP1-211ENST00000555178 C12orf66Q96MD2 445 aa10.48□□□□□ -0.73
TDP1-211ENST00000555178 GTPBP2Q9BX10 602 aaKnown RBP10.48□□□□□ -0.73
TDP1-211ENST00000555178 PITPNM3Q9BZ71 974 aa10.48□□□□□ -0.73
TDP1-211ENST00000555178 EPN3Q9H201 632 aa10.48□□□□□ -0.73
TDP1-211ENST00000555178 DPEP2Q9H4A9 486 aa10.48□□□□□ -0.73
TDP1-211ENST00000555178 GSTO2Q9H4Y5 243 aa10.48□□□□□ -0.73
TDP1-211ENST00000555178 PARVBQ9HBI1 364 aa10.48□□□□□ -0.73
TDP1-211ENST00000555178 IMP3Q9NV31 184 aaKnown RBP10.48□□□□□ -0.73
TDP1-211ENST00000555178 NUDT4Q9NZJ9 180 aa10.48□□□□□ -0.73
TDP1-211ENST00000555178 GMEB2Q9UKD1 530 aa10.48□□□□□ -0.73
TDP1-211ENST00000555178 LNP1A1A4G5 178 aa10.47□□□□□ -0.73
TDP1-211ENST00000555178 GMNCA6NCL1 334 aa10.47□□□□□ -0.73
TDP1-211ENST00000555178 B4DGG1 531 aa10.47□□□□□ -0.73
TDP1-211ENST00000555178 AQP9O43315 295 aa10.47□□□□□ -0.73
TDP1-211ENST00000555178 EDF1O60869 148 aaKnown RBP10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms