RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 RAPSNQ13702 412 aa15.36■□□□□ 0.05
SYNE3-203ENST00000554873 FAM171BQ6P995 826 aa15.36■□□□□ 0.05
SYNE3-203ENST00000554873 BLOC1S3Q6QNY0 202 aa15.36■□□□□ 0.05
SYNE3-203ENST00000554873 LURAP1LQ8IV03 231 aa15.36■□□□□ 0.05
SYNE3-203ENST00000554873 HS3ST5Q8IZT8 346 aa15.36■□□□□ 0.05
SYNE3-203ENST00000554873 EID3Q8N140 333 aa15.36■□□□□ 0.05
SYNE3-203ENST00000554873 TMEM40Q8WWA1 233 aa15.36■□□□□ 0.05
SYNE3-203ENST00000554873 PYCR2Q96C36 320 aa15.36■□□□□ 0.05
SYNE3-203ENST00000554873 CEP19Q96LK0 163 aa15.36■□□□□ 0.05
SYNE3-203ENST00000554873 TSGA13Q96PP4 275 aa15.36■□□□□ 0.05
SYNE3-203ENST00000554873 KCNE2Q9Y6J6 123 aa15.36■□□□□ 0.05
SYNE3-203ENST00000554873 PDCD11Q14690 1871 aaKnown RBP15.35■□□□□ 0.05
SYNE3-203ENST00000554873 A0A1W2PP18 115 aa15.35■□□□□ 0.05
SYNE3-203ENST00000554873 GABRDO14764 452 aa15.35■□□□□ 0.05
SYNE3-203ENST00000554873 NDUFA2O43678 99 aa15.35■□□□□ 0.05
SYNE3-203ENST00000554873 IPO13O94829 963 aaKnown RBP15.35■□□□□ 0.05
SYNE3-203ENST00000554873 ITGB6P18564 788 aa15.35■□□□□ 0.05
SYNE3-203ENST00000554873 CXCR3P49682 368 aa15.35■□□□□ 0.05
SYNE3-203ENST00000554873 ETV1P50549 477 aa15.35■□□□□ 0.05
SYNE3-203ENST00000554873 SMARCB1Q12824 385 aa15.35■□□□□ 0.05
SYNE3-203ENST00000554873 MFSD13AQ14CX5 517 aa15.35■□□□□ 0.05
SYNE3-203ENST00000554873 SHEQ5VZ18 495 aa15.35■□□□□ 0.05
SYNE3-203ENST00000554873 ANKRD34AQ69YU3 496 aa15.35■□□□□ 0.05
SYNE3-203ENST00000554873 METTL2BQ6P1Q9 378 aaKnown RBP15.35■□□□□ 0.05
SYNE3-203ENST00000554873 DEFB132Q7Z7B7 95 aa15.35■□□□□ 0.05
SYNE3-203ENST00000554873 LINC00469Q8N7U9 141 aa15.35■□□□□ 0.05
SYNE3-203ENST00000554873 TSPEARQ8WU66 669 aa15.35■□□□□ 0.05
SYNE3-203ENST00000554873 NCLNQ969V3 563 aa15.35■□□□□ 0.05
SYNE3-203ENST00000554873 TMEM74Q96NL1 305 aa15.35■□□□□ 0.05
SYNE3-203ENST00000554873 CYP2S1Q96SQ9 504 aa15.35■□□□□ 0.05
SYNE3-203ENST00000554873 FICDQ9BVA6 458 aa15.35■□□□□ 0.05
SYNE3-203ENST00000554873 BEX2Q9BXY8 128 aa15.35■□□□□ 0.05
SYNE3-203ENST00000554873 KATNBL1Q9H079 304 aa15.35■□□□□ 0.05
SYNE3-203ENST00000554873 NIPAL2Q9H841 368 aa15.35■□□□□ 0.05
SYNE3-203ENST00000554873 PRDM8Q9NQV8 689 aa15.35■□□□□ 0.05
SYNE3-203ENST00000554873 ERVK13-1Q9NX77 482 aa15.35■□□□□ 0.05
SYNE3-203ENST00000554873 CACNG4Q9UBN1 327 aa15.35■□□□□ 0.05
SYNE3-203ENST00000554873 STOML2Q9UJZ1 356 aa15.35■□□□□ 0.05
SYNE3-203ENST00000554873 OTOFQ9HC10 1997 aa15.35■□□□□ 0.05
SYNE3-203ENST00000554873 A0A087X1B8 175 aa15.35■□□□□ 0.05
SYNE3-203ENST00000554873 DFFAO00273 331 aa15.35■□□□□ 0.05
SYNE3-203ENST00000554873 PLD2O14939 933 aa15.35■□□□□ 0.05
SYNE3-203ENST00000554873 LCKP06239 509 aa15.35■□□□□ 0.05
SYNE3-203ENST00000554873 MMP3P08254 477 aa15.35■□□□□ 0.05
SYNE3-203ENST00000554873 ACADMP11310 421 aa15.35■□□□□ 0.05
SYNE3-203ENST00000554873 ZNF30P17039 623 aa15.35■□□□□ 0.05
SYNE3-203ENST00000554873 CBX5P45973 191 aa15.35■□□□□ 0.05
SYNE3-203ENST00000554873 ARPP19P56211 112 aa15.35■□□□□ 0.05
SYNE3-203ENST00000554873 OR4D2P58180 307 aa15.35■□□□□ 0.05
SYNE3-203ENST00000554873 RFX4Q33E94 735 aa15.35■□□□□ 0.05
SYNE3-203ENST00000554873 PLA2G4EQ3MJ16 856 aa15.35■□□□□ 0.05
SYNE3-203ENST00000554873 ZC3H12BQ5HYM0 836 aaKnown RBP15.35■□□□□ 0.05
SYNE3-203ENST00000554873 UBXN11Q5T124 520 aa15.35■□□□□ 0.05
SYNE3-203ENST00000554873 RBM20Q5T481 1227 aaKnown RBP15.35■□□□□ 0.05
SYNE3-203ENST00000554873 PM20D1Q6GTS8 502 aa15.35■□□□□ 0.05
SYNE3-203ENST00000554873 C2CD4AQ8NCU7 369 aaPredicted RBP15.35■□□□□ 0.05
SYNE3-203ENST00000554873 ZNF540Q8NDQ6 660 aa15.35■□□□□ 0.05
SYNE3-203ENST00000554873 OR4M2Q8NGB6 313 aa15.35■□□□□ 0.05
SYNE3-203ENST00000554873 PDLIM5Q96HC4 596 aaKnown RBP15.35■□□□□ 0.05
SYNE3-203ENST00000554873 SDR39U1Q9NRG7 319 aaPredicted RBP15.35■□□□□ 0.05
SYNE3-203ENST00000554873 RNF6Q9Y252 685 aa15.35■□□□□ 0.05
SYNE3-203ENST00000554873 PCDHB14Q9Y5E9 798 aa15.35■□□□□ 0.05
SYNE3-203ENST00000554873 MYBPHLA2RUH7 354 aa15.35■□□□□ 0.05
SYNE3-203ENST00000554873 LINC00862A6NCI5 91 aa15.35■□□□□ 0.05
SYNE3-203ENST00000554873 A8MT66 165 aa15.35■□□□□ 0.05
SYNE3-203ENST00000554873 STX7O15400 261 aaKnown RBP15.35■□□□□ 0.05
SYNE3-203ENST00000554873 DFNA5O60443 496 aa15.35■□□□□ 0.05
SYNE3-203ENST00000554873 SNAI1O95863 264 aaPredicted RBP15.35■□□□□ 0.05
SYNE3-203ENST00000554873 SMPD1P17405 629 aa15.35■□□□□ 0.05
SYNE3-203ENST00000554873 BRCA1P38398 1863 aaKnown RBP15.35■□□□□ 0.05
SYNE3-203ENST00000554873 CTSKP43235 329 aa15.35■□□□□ 0.05
SYNE3-203ENST00000554873 PLK1P53350 603 aa15.35■□□□□ 0.05
SYNE3-203ENST00000554873 RPS6KA2Q15349 733 aa15.35■□□□□ 0.05
SYNE3-203ENST00000554873 DDR2Q16832 855 aa15.35■□□□□ 0.05
SYNE3-203ENST00000554873 TIGD3Q6B0B8 471 aa15.35■□□□□ 0.05
SYNE3-203ENST00000554873 SPESP1Q6UW49 350 aa15.35■□□□□ 0.05
SYNE3-203ENST00000554873 KDELC2Q7Z4H8 507 aa15.35■□□□□ 0.05
SYNE3-203ENST00000554873 ANKRD53Q8N9V6 530 aa15.35■□□□□ 0.05
SYNE3-203ENST00000554873 PPHLN1Q8NEY8 458 aaKnown RBP15.35■□□□□ 0.05
SYNE3-203ENST00000554873 ATXN3LQ9H3M9 355 aa15.35■□□□□ 0.05
SYNE3-203ENST00000554873 ATP6V1HQ9UI12 483 aa15.35■□□□□ 0.05
SYNE3-203ENST00000554873 KLHL20Q9Y2M5 609 aa15.35■□□□□ 0.05
SYNE3-203ENST00000554873 ORC6Q9Y5N6 252 aa15.35■□□□□ 0.05
SYNE3-203ENST00000554873 A0A0U1RQS6 177 aa15.34■□□□□ 0.05
SYNE3-203ENST00000554873 TFECO14948 347 aaPredicted RBP15.34■□□□□ 0.05
SYNE3-203ENST00000554873 SERPINI2O75830 405 aa15.34■□□□□ 0.05
SYNE3-203ENST00000554873 OR2B3O76000 313 aa15.34■□□□□ 0.05
SYNE3-203ENST00000554873 CST1P01037 141 aa15.34■□□□□ 0.05
SYNE3-203ENST00000554873 ITGAMP11215 1152 aa15.34■□□□□ 0.05
SYNE3-203ENST00000554873 CSTF2P33240 577 aaKnown RBP eCLIP15.34■□□□□ 0.05
SYNE3-203ENST00000554873 LIPAP38571 399 aa15.34■□□□□ 0.05
SYNE3-203ENST00000554873 SLC12A2P55011 1212 aa15.34■□□□□ 0.05
SYNE3-203ENST00000554873 FSCN1Q16658 493 aaKnown RBP15.34■□□□□ 0.05
SYNE3-203ENST00000554873 SYT16Q17RD7 645 aa15.34■□□□□ 0.05
SYNE3-203ENST00000554873 BTBD16Q32M84 506 aa15.34■□□□□ 0.05
SYNE3-203ENST00000554873 ZNF789Q5FWF6 425 aa15.34■□□□□ 0.05
SYNE3-203ENST00000554873 TECRLQ5HYJ1 363 aa15.34■□□□□ 0.05
SYNE3-203ENST00000554873 BHLHA9Q7RTU4 235 aa15.34■□□□□ 0.05
SYNE3-203ENST00000554873 ABI1Q8IZP0 508 aa15.34■□□□□ 0.05
SYNE3-203ENST00000554873 PNPLA1Q8N8W4 532 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms