RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 GSDMBQ8TAX9 411 aa1.49□□□□□ -2.17
PRPF39-208ENST00000554785 HMGCLL1Q8TB92 370 aa1.49□□□□□ -2.17
PRPF39-208ENST00000554785 PRPF31Q8WWY3 499 aaKnown RBP1.49□□□□□ -2.17
PRPF39-208ENST00000554785 DNAAF4Q8WXU2 420 aa1.49□□□□□ -2.17
PRPF39-208ENST00000554785 TANKQ92844 425 aa1.49□□□□□ -2.17
PRPF39-208ENST00000554785 C3orf30Q96M34 536 aa1.49□□□□□ -2.17
PRPF39-208ENST00000554785 TESK2Q96S53 571 aa1.49□□□□□ -2.17
PRPF39-208ENST00000554785 FIZ1Q96SL8 496 aa1.49□□□□□ -2.17
PRPF39-208ENST00000554785 PAFAH2Q99487 392 aa1.49□□□□□ -2.17
PRPF39-208ENST00000554785 MTERF1Q99551 399 aaKnown RBP1.49□□□□□ -2.17
PRPF39-208ENST00000554785 SEMA3CQ99985 751 aa1.49□□□□□ -2.17
PRPF39-208ENST00000554785 KIFC3Q9BVG8 833 aa1.49□□□□□ -2.17
PRPF39-208ENST00000554785 SPRY4Q9C004 299 aa1.49□□□□□ -2.17
PRPF39-208ENST00000554785 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP1.49□□□□□ -2.17
PRPF39-208ENST00000554785 TRMT1Q9NXH9 659 aaKnown RBP1.49□□□□□ -2.17
PRPF39-208ENST00000554785 PSD3Q9NYI0 1048 aa1.49□□□□□ -2.17
PRPF39-208ENST00000554785 WSB2Q9NYS7 404 aaPredicted RBP1.49□□□□□ -2.17
PRPF39-208ENST00000554785 SMARCAL1Q9NZC9 954 aa1.49□□□□□ -2.17
PRPF39-208ENST00000554785 C1RLQ9NZP8 487 aa1.49□□□□□ -2.17
PRPF39-208ENST00000554785 MDFICQ9P1T7 246 aa1.49□□□□□ -2.17
PRPF39-208ENST00000554785 MORF4L1Q9UBU8 362 aa1.49□□□□□ -2.17
PRPF39-208ENST00000554785 TRMT112Q9UI30 125 aaKnown RBP1.49□□□□□ -2.17
PRPF39-208ENST00000554785 FBXL2Q9UKC9 423 aa1.49□□□□□ -2.17
PRPF39-208ENST00000554785 PADI1Q9ULC6 663 aa1.49□□□□□ -2.17
PRPF39-208ENST00000554785 PLAGL1Q9UM63 463 aa1.49□□□□□ -2.17
PRPF39-208ENST00000554785 KLHL20Q9Y2M5 609 aa1.49□□□□□ -2.17
PRPF39-208ENST00000554785 LAMB1P07942 1786 aa1.49□□□□□ -2.17
PRPF39-208ENST00000554785 MAST2Q6P0Q8 1798 aa1.49□□□□□ -2.17
PRPF39-208ENST00000554785 PKD1L2Q7Z442 2459 aa1.49□□□□□ -2.17
PRPF39-208ENST00000554785 NCOR2Q9Y618 2525 aa1.48□□□□□ -2.17
PRPF39-208ENST00000554785 PFASO15067 1338 aa1.48□□□□□ -2.17
PRPF39-208ENST00000554785 CDHR2Q9BYE9 1310 aa1.48□□□□□ -2.17
PRPF39-208ENST00000554785 ATRXP46100 2492 aa1.48□□□□□ -2.17
PRPF39-208ENST00000554785 PTPRFP10586 1907 aa1.48□□□□□ -2.17
PRPF39-208ENST00000554785 MYH3P11055 1940 aa1.48□□□□□ -2.17
PRPF39-208ENST00000554785 LOC100509620A0A075B734 347 aa1.48□□□□□ -2.17
PRPF39-208ENST00000554785 LNP1A1A4G5 178 aa1.48□□□□□ -2.17
PRPF39-208ENST00000554785 SYNDIG1LA6NDD5 238 aa1.48□□□□□ -2.17
PRPF39-208ENST00000554785 TMEM8BA6NDV4 472 aa1.48□□□□□ -2.17
PRPF39-208ENST00000554785 GLOD5A6NK44 160 aa1.48□□□□□ -2.17
PRPF39-208ENST00000554785 TCP10L2B9ZVM9 353 aa1.48□□□□□ -2.17
PRPF39-208ENST00000554785 ANKRD28O15084 1053 aa1.48□□□□□ -2.17
PRPF39-208ENST00000554785 ADAMDEC1O15204 470 aa1.48□□□□□ -2.17
PRPF39-208ENST00000554785 ADAM20O43506 726 aa1.48□□□□□ -2.17
PRPF39-208ENST00000554785 PLPP2O43688 288 aa1.48□□□□□ -2.17
PRPF39-208ENST00000554785 PLOD3O60568 738 aa1.48□□□□□ -2.17
PRPF39-208ENST00000554785 RSL1D1O76021 490 aaKnown RBP1.48□□□□□ -2.17
PRPF39-208ENST00000554785 KDM4BO94953 1096 aa1.48□□□□□ -2.17
PRPF39-208ENST00000554785 PPP1R3DO95685 299 aa1.48□□□□□ -2.17
PRPF39-208ENST00000554785 GH2P01242 217 aa1.48□□□□□ -2.17
PRPF39-208ENST00000554785 ADRB2P07550 413 aa1.48□□□□□ -2.17
PRPF39-208ENST00000554785 FCGR1AP12314 374 aa1.48□□□□□ -2.17
PRPF39-208ENST00000554785 TRIM21P19474 475 aaKnown RBP1.48□□□□□ -2.17
PRPF39-208ENST00000554785 SEC61A1P61619 476 aaKnown RBP1.48□□□□□ -2.17
PRPF39-208ENST00000554785 TUBA1BP68363 451 aa1.48□□□□□ -2.17
PRPF39-208ENST00000554785 PPP2R2BQ00005 443 aa1.48□□□□□ -2.17
PRPF39-208ENST00000554785 SPOCK1Q08629 439 aa1.48□□□□□ -2.17
PRPF39-208ENST00000554785 ZNF155Q12901 538 aaPredicted RBP1.48□□□□□ -2.17
PRPF39-208ENST00000554785 DLG1Q12959 904 aa1.48□□□□□ -2.17
PRPF39-208ENST00000554785 TNFAIP1Q13829 316 aa1.48□□□□□ -2.17
PRPF39-208ENST00000554785 BAATQ14032 418 aaPredicted RBP1.48□□□□□ -2.17
PRPF39-208ENST00000554785 VGLL4Q14135 290 aa1.48□□□□□ -2.17
PRPF39-208ENST00000554785 SYT16Q17RD7 645 aa1.48□□□□□ -2.17
PRPF39-208ENST00000554785 SETMARQ53H47 684 aaPredicted RBP1.48□□□□□ -2.17
PRPF39-208ENST00000554785 GARNL3Q5VVW2 1013 aa1.48□□□□□ -2.17
PRPF39-208ENST00000554785 FAM109BQ6ICB4 259 aaPredicted RBP1.48□□□□□ -2.17
PRPF39-208ENST00000554785 CAPRIN2Q6IMN6 1127 aaKnown RBP1.48□□□□□ -2.17
PRPF39-208ENST00000554785 NAA16Q6N069 864 aaPredicted RBP1.48□□□□□ -2.17
PRPF39-208ENST00000554785 LIN28BQ6ZN17 250 aaKnown RBP eCLIP1.48□□□□□ -2.17
PRPF39-208ENST00000554785 TPRG1Q6ZUI0 275 aa1.48□□□□□ -2.17
PRPF39-208ENST00000554785 AACSQ86V21 672 aa1.48□□□□□ -2.17
PRPF39-208ENST00000554785 RASGEF1CQ8N431 466 aa1.48□□□□□ -2.17
PRPF39-208ENST00000554785 EMC1Q8N766 993 aa1.48□□□□□ -2.17
PRPF39-208ENST00000554785 SYT2Q8N9I0 419 aaPredicted RBP1.48□□□□□ -2.17
PRPF39-208ENST00000554785 AVL9Q8NBF6 648 aa1.48□□□□□ -2.17
PRPF39-208ENST00000554785 MCUQ8NE86 351 aa1.48□□□□□ -2.17
PRPF39-208ENST00000554785 OR5R1Q8NH85 324 aa1.48□□□□□ -2.17
PRPF39-208ENST00000554785 UTP15Q8TED0 518 aaKnown RBP1.48□□□□□ -2.17
PRPF39-208ENST00000554785 CEP295NLQ96MC4 621 aa1.48□□□□□ -2.17
PRPF39-208ENST00000554785 DACH2Q96NX9 599 aa1.48□□□□□ -2.17
PRPF39-208ENST00000554785 QRFPRQ96P65 431 aa1.48□□□□□ -2.17
PRPF39-208ENST00000554785 GCNAQ96QF7 691 aa1.48□□□□□ -2.17
PRPF39-208ENST00000554785 SERINC2Q96SA4 455 aa1.48□□□□□ -2.17
PRPF39-208ENST00000554785 PCYT2Q99447 389 aa1.48□□□□□ -2.17
PRPF39-208ENST00000554785 DDOQ99489 341 aa1.48□□□□□ -2.17
PRPF39-208ENST00000554785 MEIS3Q99687 375 aa1.48□□□□□ -2.17
PRPF39-208ENST00000554785 APOL6Q9BWW8 343 aa1.48□□□□□ -2.17
PRPF39-208ENST00000554785 RTN4RQ9BZR6 473 aa1.48□□□□□ -2.17
PRPF39-208ENST00000554785 NYXQ9GZU5 481 aa1.48□□□□□ -2.17
PRPF39-208ENST00000554785 DEFB129Q9H1M3 183 aa1.48□□□□□ -2.17
PRPF39-208ENST00000554785 RAD21L1Q9H4I0 556 aa1.48□□□□□ -2.17
PRPF39-208ENST00000554785 DNAJC18Q9H819 358 aa1.48□□□□□ -2.17
PRPF39-208ENST00000554785 MARCH4Q9P2E8 410 aaPredicted RBP1.48□□□□□ -2.17
PRPF39-208ENST00000554785 CPSF2Q9P2I0 782 aaKnown RBP1.48□□□□□ -2.17
PRPF39-208ENST00000554785 DNAJB4Q9UDY4 337 aa1.48□□□□□ -2.17
PRPF39-208ENST00000554785 SIX4Q9UIU6 781 aa1.48□□□□□ -2.17
PRPF39-208ENST00000554785 PADI3Q9ULW8 664 aa1.48□□□□□ -2.17
PRPF39-208ENST00000554785 AMDHD2Q9Y303 409 aa1.48□□□□□ -2.17
PRPF39-208ENST00000554785 MAGED1Q9Y5V3 778 aaPredicted RBP1.48□□□□□ -2.17
PRPF39-208ENST00000554785 FAM169AQ9Y6X4 670 aa1.48□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms