RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 UBASH3AP57075 661 aa2.94□□□□□ -1.94
SCFD1-213ENST00000554776 ARL16Q0P5N6 197 aa2.94□□□□□ -1.94
SCFD1-213ENST00000554776 NFE2L1Q14494 772 aa2.94□□□□□ -1.94
SCFD1-213ENST00000554776 KRTAP24-1Q3LI83 254 aa2.94□□□□□ -1.94
SCFD1-213ENST00000554776 PHLDA2Q53GA4 152 aa2.94□□□□□ -1.94
SCFD1-213ENST00000554776 GRTP1Q5TC63 336 aa2.94□□□□□ -1.94
SCFD1-213ENST00000554776 IRAK1BP1Q5VVH5 260 aa2.94□□□□□ -1.94
SCFD1-213ENST00000554776 FAM198BQ6UWH4 519 aa2.94□□□□□ -1.94
SCFD1-213ENST00000554776 PIWIL4Q7Z3Z4 852 aaKnown RBP2.94□□□□□ -1.94
SCFD1-213ENST00000554776 ARHGAP22Q7Z5H3 698 aa2.94□□□□□ -1.94
SCFD1-213ENST00000554776 DSG4Q86SJ6 1040 aa2.94□□□□□ -1.94
SCFD1-213ENST00000554776 SLC9B2Q86UD5 537 aa2.94□□□□□ -1.94
SCFD1-213ENST00000554776 COMMD2Q86X83 199 aa2.94□□□□□ -1.94
SCFD1-213ENST00000554776 SNX32Q86XE0 403 aa2.94□□□□□ -1.94
SCFD1-213ENST00000554776 IQCA1Q86XH1 822 aa2.94□□□□□ -1.94
SCFD1-213ENST00000554776 CTAGE4Q8IX94 777 aa2.94□□□□□ -1.94
SCFD1-213ENST00000554776 SIX6OS1Q8N1H7 587 aa2.94□□□□□ -1.94
SCFD1-213ENST00000554776 GOLGA6L2Q8N9W4 650 aaPredicted RBP2.94□□□□□ -1.94
SCFD1-213ENST00000554776 ROBO4Q8WZ75 1007 aa2.94□□□□□ -1.94
SCFD1-213ENST00000554776 EXT2Q93063 718 aa2.94□□□□□ -1.94
SCFD1-213ENST00000554776 HES6Q96HZ4 224 aa2.94□□□□□ -1.94
SCFD1-213ENST00000554776 CCDC114Q96M63 670 aa2.94□□□□□ -1.94
SCFD1-213ENST00000554776 MUS81Q96NY9 551 aa2.94□□□□□ -1.94
SCFD1-213ENST00000554776 INPP4AQ96PE3 977 aaPredicted RBP2.94□□□□□ -1.94
SCFD1-213ENST00000554776 SPAG5Q96R06 1193 aa2.94□□□□□ -1.94
SCFD1-213ENST00000554776 SEPHS2Q99611 448 aa2.94□□□□□ -1.94
SCFD1-213ENST00000554776 CPNE1Q99829 537 aa2.94□□□□□ -1.94
SCFD1-213ENST00000554776 SLX1AQ9BQ83 275 aa2.94□□□□□ -1.94
SCFD1-213ENST00000554776 FERMT1Q9BQL6 677 aa2.94□□□□□ -1.94
SCFD1-213ENST00000554776 LMF2Q9BU23 707 aaKnown RBP2.94□□□□□ -1.94
SCFD1-213ENST00000554776 POLR3CQ9BUI4 534 aaPredicted RBP2.94□□□□□ -1.94
SCFD1-213ENST00000554776 TRAF4Q9BUZ4 470 aaPredicted RBP2.94□□□□□ -1.94
SCFD1-213ENST00000554776 XAB2Q9HCS7 855 aaKnown RBP2.94□□□□□ -1.94
SCFD1-213ENST00000554776 Q9N2K0 584 aa2.94□□□□□ -1.94
SCFD1-213ENST00000554776 B3GAT1Q9P2W7 334 aa2.94□□□□□ -1.94
SCFD1-213ENST00000554776 POLLQ9UGP5 575 aa2.94□□□□□ -1.94
SCFD1-213ENST00000554776 IL17BQ9UHF5 180 aa2.94□□□□□ -1.94
SCFD1-213ENST00000554776 RASAL2Q9UJF2 1139 aa2.94□□□□□ -1.94
SCFD1-213ENST00000554776 CPSF3Q9UKF6 684 aaKnown RBP2.94□□□□□ -1.94
SCFD1-213ENST00000554776 PCDHAC2Q9Y5I4 1007 aa2.94□□□□□ -1.94
SCFD1-213ENST00000554776 A0A1W2PS18 150 aa2.93□□□□□ -1.94
SCFD1-213ENST00000554776 FAM170AA1A519 330 aa2.93□□□□□ -1.94
SCFD1-213ENST00000554776 PTGESO14684 152 aa2.93□□□□□ -1.94
SCFD1-213ENST00000554776 AP5Z1O43299 807 aa2.93□□□□□ -1.94
SCFD1-213ENST00000554776 XPNPEP2O43895 674 aa2.93□□□□□ -1.94
SCFD1-213ENST00000554776 RAB40ALP0C0E4 278 aa2.93□□□□□ -1.94
SCFD1-213ENST00000554776 FAM58BPP0C7Q3 252 aa2.93□□□□□ -1.94
SCFD1-213ENST00000554776 LBPP18428 481 aa2.93□□□□□ -1.94
SCFD1-213ENST00000554776 JAK1P23458 1154 aa2.93□□□□□ -1.94
SCFD1-213ENST00000554776 OAS2P29728 719 aaKnown RBP2.93□□□□□ -1.94
SCFD1-213ENST00000554776 KCNJ1P48048 391 aa2.93□□□□□ -1.94
SCFD1-213ENST00000554776 SLC9A3P48764 834 aa2.93□□□□□ -1.94
SCFD1-213ENST00000554776 KRTAP10-6P60371 365 aaPredicted RBP2.93□□□□□ -1.94
SCFD1-213ENST00000554776 PITX1P78337 314 aaPredicted RBP2.93□□□□□ -1.94
SCFD1-213ENST00000554776 MBTD1Q05BQ5 628 aa2.93□□□□□ -1.94
SCFD1-213ENST00000554776 PTK6Q13882 451 aa2.93□□□□□ -1.94
SCFD1-213ENST00000554776 NR1D2Q14995 579 aa2.93□□□□□ -1.94
SCFD1-213ENST00000554776 E2F5Q15329 346 aa2.93□□□□□ -1.94
SCFD1-213ENST00000554776 LBHQ53QV2 105 aaPredicted RBP2.93□□□□□ -1.94
SCFD1-213ENST00000554776 MDH1BQ5I0G3 518 aa2.93□□□□□ -1.94
SCFD1-213ENST00000554776 TCTE1Q5JU00 501 aa2.93□□□□□ -1.94
SCFD1-213ENST00000554776 MFSD12Q6NUT3 480 aa2.93□□□□□ -1.94
SCFD1-213ENST00000554776 ZNF704Q6ZNC4 412 aaPredicted RBP2.93□□□□□ -1.94
SCFD1-213ENST00000554776 USP43Q70EL4 1123 aa2.93□□□□□ -1.94
SCFD1-213ENST00000554776 NUP54Q7Z3B4 507 aa2.93□□□□□ -1.94
SCFD1-213ENST00000554776 SPATA21Q7Z572 469 aa2.93□□□□□ -1.94
SCFD1-213ENST00000554776 SPATA19Q7Z5L4 167 aa2.93□□□□□ -1.94
SCFD1-213ENST00000554776 ZNF329Q86UD4 541 aa2.93□□□□□ -1.94
SCFD1-213ENST00000554776 TLK2Q86UE8 772 aa2.93□□□□□ -1.94
SCFD1-213ENST00000554776 CFAP206Q8IYR0 622 aa2.93□□□□□ -1.94
SCFD1-213ENST00000554776 CIARTQ8N365 385 aaPredicted RBP2.93□□□□□ -1.94
SCFD1-213ENST00000554776 ZNF713Q8N859 430 aaPredicted RBP2.93□□□□□ -1.94
SCFD1-213ENST00000554776 CD101Q93033 1021 aa2.93□□□□□ -1.94
SCFD1-213ENST00000554776 MR1Q95460 341 aa2.93□□□□□ -1.94
SCFD1-213ENST00000554776 ST6GALNAC6Q969X2 333 aa2.93□□□□□ -1.94
SCFD1-213ENST00000554776 ARSGQ96EG1 525 aa2.93□□□□□ -1.94
SCFD1-213ENST00000554776 FEVQ99581 238 aa2.93□□□□□ -1.94
SCFD1-213ENST00000554776 S1PR5Q9H228 398 aa2.93□□□□□ -1.94
SCFD1-213ENST00000554776 ACKR4Q9NPB9 350 aa2.93□□□□□ -1.94
SCFD1-213ENST00000554776 CWC25Q9NXE8 425 aaPredicted RBP2.93□□□□□ -1.94
SCFD1-213ENST00000554776 TBC1D7Q9P0N9 293 aa2.93□□□□□ -1.94
SCFD1-213ENST00000554776 ABT1Q9ULW3 272 aaKnown RBP2.93□□□□□ -1.94
SCFD1-213ENST00000554776 A0A0G2JNG1 304 aa2.92□□□□□ -1.94
SCFD1-213ENST00000554776 A0A1W2PPQ1 181 aa2.92□□□□□ -1.94
SCFD1-213ENST00000554776 A4D1N5 150 aa2.92□□□□□ -1.94
SCFD1-213ENST00000554776 ANXA2P2A6NMY6 339 aa2.92□□□□□ -1.94
SCFD1-213ENST00000554776 ENO4A6NNW6 628 aa2.92□□□□□ -1.94
SCFD1-213ENST00000554776 ANKRD66B4E2M5 251 aa2.92□□□□□ -1.94
SCFD1-213ENST00000554776 CLDN4O14493 209 aa2.92□□□□□ -1.94
SCFD1-213ENST00000554776 LDLRP01130 860 aa2.92□□□□□ -1.94
SCFD1-213ENST00000554776 HSP90AB1P08238 724 aaKnown RBP2.92□□□□□ -1.94
SCFD1-213ENST00000554776 MARK3P27448 753 aa2.92□□□□□ -1.94
SCFD1-213ENST00000554776 THOP1P52888 689 aa2.92□□□□□ -1.94
SCFD1-213ENST00000554776 YWHAHQ04917 246 aaPredicted RBP2.92□□□□□ -1.94
SCFD1-213ENST00000554776 ZNF415Q09FC8 603 aa2.92□□□□□ -1.94
SCFD1-213ENST00000554776 ITGA7Q13683 1181 aa2.92□□□□□ -1.94
SCFD1-213ENST00000554776 TUBB2AQ13885 445 aa2.92□□□□□ -1.94
SCFD1-213ENST00000554776 VEZF1Q14119 521 aa2.92□□□□□ -1.94
SCFD1-213ENST00000554776 KIR2DS5Q14953 304 aa2.92□□□□□ -1.94
SCFD1-213ENST00000554776 ZRANB3Q5FWF4 1079 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms