RNA–Protein interactions for RNA: ENST00000554180.5

TDP1-209, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-209ENST00000554180 E2F3O00716 465 aa7.45□□□□□ -1.22
TDP1-209ENST00000554180 NDUFAB1O14561 156 aa7.45□□□□□ -1.22
TDP1-209ENST00000554180 ITM2AO43736 263 aa7.45□□□□□ -1.22
TDP1-209ENST00000554180 KDM1AO60341 852 aa7.45□□□□□ -1.22
TDP1-209ENST00000554180 KATNA1O75449 491 aa7.45□□□□□ -1.22
TDP1-209ENST00000554180 STK16O75716 305 aa7.45□□□□□ -1.22
TDP1-209ENST00000554180 SUPT7LO94864 414 aa7.45□□□□□ -1.22
TDP1-209ENST00000554180 SIX3O95343 332 aaPredicted RBP7.45□□□□□ -1.22
TDP1-209ENST00000554180 HSPA4LO95757 839 aa7.45□□□□□ -1.22
TDP1-209ENST00000554180 GUCA1CO95843 209 aa7.45□□□□□ -1.22
TDP1-209ENST00000554180 CSF2P04141 144 aa7.45□□□□□ -1.22
TDP1-209ENST00000554180 TROVE2P10155 538 aaKnown RBP eCLIP7.45□□□□□ -1.22
TDP1-209ENST00000554180 ERGP11308 486 aa7.45□□□□□ -1.22
TDP1-209ENST00000554180 F3P13726 295 aa7.45□□□□□ -1.22
TDP1-209ENST00000554180 GNSP15586 552 aa7.45□□□□□ -1.22
TDP1-209ENST00000554180 CCND1P24385 295 aa7.45□□□□□ -1.22
TDP1-209ENST00000554180 AVPR2P30518 371 aa7.45□□□□□ -1.22
TDP1-209ENST00000554180 ARRB2P32121 409 aa7.45□□□□□ -1.22
TDP1-209ENST00000554180 ACTR1BP42025 376 aa7.45□□□□□ -1.22
TDP1-209ENST00000554180 BDKRB1P46663 353 aa7.45□□□□□ -1.22
TDP1-209ENST00000554180 SLC6A12P48065 614 aa7.45□□□□□ -1.22
TDP1-209ENST00000554180 C21orf59P57076 290 aa7.45□□□□□ -1.22
TDP1-209ENST00000554180 NXPH1P58417 271 aa7.45□□□□□ -1.22
TDP1-209ENST00000554180 ACTR1AP61163 376 aa7.45□□□□□ -1.22
TDP1-209ENST00000554180 CLCQ05315 142 aa7.45□□□□□ -1.22
TDP1-209ENST00000554180 ELOCQ15369 112 aa7.45□□□□□ -1.22
TDP1-209ENST00000554180 PLK5Q496M5 336 aa7.45□□□□□ -1.22
TDP1-209ENST00000554180 UNC50Q53HI1 259 aa7.45□□□□□ -1.22
TDP1-209ENST00000554180 ARL13AQ5H913 290 aaPredicted RBP7.45□□□□□ -1.22
TDP1-209ENST00000554180 PEAR1Q5VY43 1037 aaPredicted RBP7.45□□□□□ -1.22
TDP1-209ENST00000554180 RD3Q7Z3Z2 195 aa7.45□□□□□ -1.22
TDP1-209ENST00000554180 RABEPKQ7Z6M1 372 aa7.45□□□□□ -1.22
TDP1-209ENST00000554180 AFAP1L2Q8N4X5 818 aa7.45□□□□□ -1.22
TDP1-209ENST00000554180 AVL9Q8NBF6 648 aa7.45□□□□□ -1.22
TDP1-209ENST00000554180 ZBTB44Q8NCP5 570 aa7.45□□□□□ -1.22
TDP1-209ENST00000554180 SPDYE1Q8NFV5 336 aaPredicted RBP7.45□□□□□ -1.22
TDP1-209ENST00000554180 OR9A1PQ8NGU1 263 aa7.45□□□□□ -1.22
TDP1-209ENST00000554180 CFAP61Q8NHU2 1237 aa7.45□□□□□ -1.22
TDP1-209ENST00000554180 PIWIL2Q8TC59 973 aaKnown RBP7.45□□□□□ -1.22
TDP1-209ENST00000554180 BCAS4Q8TDM0 211 aa7.45□□□□□ -1.22
TDP1-209ENST00000554180 STON2Q8WXE9 905 aa7.45□□□□□ -1.22
TDP1-209ENST00000554180 FAR2Q96K12 515 aa7.45□□□□□ -1.22
TDP1-209ENST00000554180 ZNF382Q96SR6 550 aa7.45□□□□□ -1.22
TDP1-209ENST00000554180 TMEM79Q9BSE2 394 aa7.45□□□□□ -1.22
TDP1-209ENST00000554180 RAB11FIP5Q9BXF6 653 aa7.45□□□□□ -1.22
TDP1-209ENST00000554180 TRIM55Q9BYV6 548 aa7.45□□□□□ -1.22
TDP1-209ENST00000554180 CD244Q9BZW8 370 aa7.45□□□□□ -1.22
TDP1-209ENST00000554180 ILKAPQ9H0C8 392 aaPredicted RBP7.45□□□□□ -1.22
TDP1-209ENST00000554180 WWP1Q9H0M0 922 aa7.45□□□□□ -1.22
TDP1-209ENST00000554180 TMEM168Q9H0V1 697 aa7.45□□□□□ -1.22
TDP1-209ENST00000554180 MIR1-1HGQ9H1L0 117 aa7.45□□□□□ -1.22
TDP1-209ENST00000554180 TRIT1Q9H3H1 467 aaKnown RBP7.45□□□□□ -1.22
TDP1-209ENST00000554180 STN1Q9H668 368 aaKnown RBP7.45□□□□□ -1.22
TDP1-209ENST00000554180 ERVMER34-1Q9H9K5 563 aa7.45□□□□□ -1.22
TDP1-209ENST00000554180 SPATA7Q9P0W8 599 aa7.45□□□□□ -1.22
TDP1-209ENST00000554180 KLHL14Q9P2G3 628 aa7.45□□□□□ -1.22
TDP1-209ENST00000554180 OPTCQ9UBM4 332 aa7.45□□□□□ -1.22
TDP1-209ENST00000554180 APOBEC3BQ9UH17 382 aaKnown RBP7.45□□□□□ -1.22
TDP1-209ENST00000554180 POLG2Q9UHN1 485 aa7.45□□□□□ -1.22
TDP1-209ENST00000554180 PNMA8BQ9ULN7 279 aaPredicted RBP7.45□□□□□ -1.22
TDP1-209ENST00000554180 PCDHGA2Q9Y5H1 932 aa7.45□□□□□ -1.22
TDP1-209ENST00000554180 ST14Q9Y5Y6 855 aa7.45□□□□□ -1.22
TDP1-209ENST00000554180 CACNA1EQ15878 2313 aa7.45□□□□□ -1.22
TDP1-209ENST00000554180 KIR2DS5A0A0G2JLQ3 304 aa7.44□□□□□ -1.22
TDP1-209ENST00000554180 A0A0G2JNG1 304 aa7.44□□□□□ -1.22
TDP1-209ENST00000554180 K7EPI3 171 aa7.44□□□□□ -1.22
TDP1-209ENST00000554180 KIR2DS3K7RE56 304 aa7.44□□□□□ -1.22
TDP1-209ENST00000554180 GIPC1O14908 333 aa7.44□□□□□ -1.22
TDP1-209ENST00000554180 TAPBPO15533 448 aa7.44□□□□□ -1.22
TDP1-209ENST00000554180 SNX3O60493 162 aa7.44□□□□□ -1.22
TDP1-209ENST00000554180 LYPLA1O75608 230 aaPredicted RBP7.44□□□□□ -1.22
TDP1-209ENST00000554180 ESRRBO95718 433 aa7.44□□□□□ -1.22
TDP1-209ENST00000554180 SLC16A8O95907 504 aa7.44□□□□□ -1.22
TDP1-209ENST00000554180 OTCP00480 354 aa7.44□□□□□ -1.22
TDP1-209ENST00000554180 CHRNGP07510 517 aa7.44□□□□□ -1.22
TDP1-209ENST00000554180 FGF4P08620 206 aa7.44□□□□□ -1.22
TDP1-209ENST00000554180 MTHFD1P11586 935 aaKnown RBP7.44□□□□□ -1.22
TDP1-209ENST00000554180 CTSEP14091 401 aa7.44□□□□□ -1.22
TDP1-209ENST00000554180 ALOX15P16050 662 aaPredicted RBP7.44□□□□□ -1.22
TDP1-209ENST00000554180 EPB42P16452 691 aa7.44□□□□□ -1.22
TDP1-209ENST00000554180 JUNDP17535 347 aa7.44□□□□□ -1.22
TDP1-209ENST00000554180 ITPKAP23677 461 aa7.44□□□□□ -1.22
TDP1-209ENST00000554180 MAOBP27338 520 aa7.44□□□□□ -1.22
TDP1-209ENST00000554180 RPL10P27635 214 aaKnown RBP7.44□□□□□ -1.22
TDP1-209ENST00000554180 IMPA1P29218 277 aa7.44□□□□□ -1.22
TDP1-209ENST00000554180 HSPA7P48741 367 aa7.44□□□□□ -1.22
TDP1-209ENST00000554180 DHPSP49366 369 aaPredicted RBP7.44□□□□□ -1.22
TDP1-209ENST00000554180 AGTR2P50052 363 aa7.44□□□□□ -1.22
TDP1-209ENST00000554180 RPL14P50914 215 aaKnown RBP7.44□□□□□ -1.22
TDP1-209ENST00000554180 PKNOX1P55347 436 aa7.44□□□□□ -1.22
TDP1-209ENST00000554180 HNRNPKP61978 463 aaKnown RBP eCLIP7.44□□□□□ -1.22
TDP1-209ENST00000554180 PCDH1Q08174 1060 aa7.44□□□□□ -1.22
TDP1-209ENST00000554180 GTF2H2Q13888 395 aa7.44□□□□□ -1.22
TDP1-209ENST00000554180 KIR2DS5Q14953 304 aa7.44□□□□□ -1.22
TDP1-209ENST00000554180 ANGPT1Q15389 498 aa7.44□□□□□ -1.22
TDP1-209ENST00000554180 RPE65Q16518 533 aa7.44□□□□□ -1.22
TDP1-209ENST00000554180 GKAP1Q5VSY0 366 aaPredicted RBP7.44□□□□□ -1.22
TDP1-209ENST00000554180 GTF2H2CQ6P1K8 395 aa7.44□□□□□ -1.22
TDP1-209ENST00000554180 SLC30A9Q6PML9 568 aa7.44□□□□□ -1.22
TDP1-209ENST00000554180 AGTRAPQ6RW13 159 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms