RNA–Protein interactions for RNA: ENST00000553704.2

LINC-ROR-201, Transcript of long intergenic non-protein coding RNA, regulator of reprogramming, humanhuman

TSL 1 (best) BASIC

Gene LINC-ROR, Length 2,603 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC-ROR-201ENST00000553704 FCGRTP55899 365 aa6.78□□□□□ -1.32
LINC-ROR-201ENST00000553704 C21orf59P57076 290 aa6.78□□□□□ -1.32
LINC-ROR-201ENST00000553704 ATP1A4Q13733 1029 aa6.78□□□□□ -1.32
LINC-ROR-201ENST00000553704 GPR162Q16538 588 aa6.78□□□□□ -1.32
LINC-ROR-201ENST00000553704 ZNF829Q3KNS6 432 aaPredicted RBP6.78□□□□□ -1.32
LINC-ROR-201ENST00000553704 USP39Q53GS9 565 aaKnown RBP6.78□□□□□ -1.32
LINC-ROR-201ENST00000553704 RUNDC3AQ59EK9 446 aa6.78□□□□□ -1.32
LINC-ROR-201ENST00000553704 C6orf141Q5SZD1 244 aa6.78□□□□□ -1.32
LINC-ROR-201ENST00000553704 HECTD3Q5T447 861 aa6.78□□□□□ -1.32
LINC-ROR-201ENST00000553704 ADGRF1Q5T601 910 aa6.78□□□□□ -1.32
LINC-ROR-201ENST00000553704 ZSWIM9Q86XI8 627 aa6.78□□□□□ -1.32
LINC-ROR-201ENST00000553704 PLPP6Q8IY26 295 aa6.78□□□□□ -1.32
LINC-ROR-201ENST00000553704 MICU2Q8IYU8 434 aa6.78□□□□□ -1.32
LINC-ROR-201ENST00000553704 STK40Q8N2I9 435 aa6.78□□□□□ -1.32
LINC-ROR-201ENST00000553704 FBXO22Q8NEZ5 403 aa6.78□□□□□ -1.32
LINC-ROR-201ENST00000553704 CNIH3Q8TBE1 160 aa6.78□□□□□ -1.32
LINC-ROR-201ENST00000553704 NETO1Q8TDF5 533 aa6.78□□□□□ -1.32
LINC-ROR-201ENST00000553704 HDAC2Q92769 488 aaKnown RBP6.78□□□□□ -1.32
LINC-ROR-201ENST00000553704 PLD4Q96BZ4 506 aa6.78□□□□□ -1.32
LINC-ROR-201ENST00000553704 SLC22A12Q96S37 553 aa6.78□□□□□ -1.32
LINC-ROR-201ENST00000553704 CPPED1Q9BRF8 314 aaPredicted RBP6.78□□□□□ -1.32
LINC-ROR-201ENST00000553704 RHNO1Q9BSD3 238 aa6.78□□□□□ -1.32
LINC-ROR-201ENST00000553704 FUNDC2Q9BWH2 189 aa6.78□□□□□ -1.32
LINC-ROR-201ENST00000553704 VN1R3Q9BXE9 311 aa6.78□□□□□ -1.32
LINC-ROR-201ENST00000553704 ACPTQ9BZG2 426 aa6.78□□□□□ -1.32
LINC-ROR-201ENST00000553704 CD244Q9BZW8 370 aa6.78□□□□□ -1.32
LINC-ROR-201ENST00000553704 DPY30Q9C005 99 aa6.78□□□□□ -1.32
LINC-ROR-201ENST00000553704 CLPBQ9H078 707 aa6.78□□□□□ -1.32
LINC-ROR-201ENST00000553704 KAT8Q9H7Z6 458 aaKnown RBP6.78□□□□□ -1.32
LINC-ROR-201ENST00000553704 IL26Q9NPH9 171 aa6.78□□□□□ -1.32
LINC-ROR-201ENST00000553704 SERHLQ9NQF3 203 aa6.78□□□□□ -1.32
LINC-ROR-201ENST00000553704 TBC1D23Q9NUY8 699 aa6.78□□□□□ -1.32
LINC-ROR-201ENST00000553704 OPTCQ9UBM4 332 aa6.78□□□□□ -1.32
LINC-ROR-201ENST00000553704 MBD1Q9UIS9 605 aaPredicted RBP6.78□□□□□ -1.32
LINC-ROR-201ENST00000553704 PPT2Q9UMR5 302 aa6.78□□□□□ -1.32
LINC-ROR-201ENST00000553704 PCDHB14Q9Y5E9 798 aa6.78□□□□□ -1.32
LINC-ROR-201ENST00000553704 C1orf232A0A0U1RR37 186 aa6.78□□□□□ -1.32
LINC-ROR-201ENST00000553704 SLC1A7O00341 560 aa6.78□□□□□ -1.32
LINC-ROR-201ENST00000553704 PFDN6O15212 129 aa6.78□□□□□ -1.32
LINC-ROR-201ENST00000553704 ZSCAN9O15535 394 aaPredicted RBP6.78□□□□□ -1.32
LINC-ROR-201ENST00000553704 RGS14O43566 566 aa6.78□□□□□ -1.32
LINC-ROR-201ENST00000553704 XPNPEP2O43895 674 aa6.78□□□□□ -1.32
LINC-ROR-201ENST00000553704 NOL3O60936 208 aaKnown RBP6.78□□□□□ -1.32
LINC-ROR-201ENST00000553704 SEC22BO75396 215 aa6.78□□□□□ -1.32
LINC-ROR-201ENST00000553704 PGLSO95336 258 aa6.78□□□□□ -1.32
LINC-ROR-201ENST00000553704 CLDN7O95471 211 aa6.78□□□□□ -1.32
LINC-ROR-201ENST00000553704 SERPINA1P01009 418 aa6.78□□□□□ -1.32
LINC-ROR-201ENST00000553704 GALTP07902 379 aa6.78□□□□□ -1.32
LINC-ROR-201ENST00000553704 SLC10A3P09131 477 aa6.78□□□□□ -1.32
LINC-ROR-201ENST00000553704 MYCLP1P12525 358 aaPredicted RBP6.78□□□□□ -1.32
LINC-ROR-201ENST00000553704 BCKDHAP12694 445 aa6.78□□□□□ -1.32
LINC-ROR-201ENST00000553704 GSTM2P28161 218 aa6.78□□□□□ -1.32
LINC-ROR-201ENST00000553704 AKT1P31749 480 aa6.78□□□□□ -1.32
LINC-ROR-201ENST00000553704 OR1D2P34982 312 aa6.78□□□□□ -1.32
LINC-ROR-201ENST00000553704 IDUAP35475 653 aa6.78□□□□□ -1.32
LINC-ROR-201ENST00000553704 GZMMP51124 257 aa6.78□□□□□ -1.32
LINC-ROR-201ENST00000553704 TPD52P55327 224 aaPredicted RBP6.78□□□□□ -1.32
LINC-ROR-201ENST00000553704 ZXDBP98169 803 aa6.78□□□□□ -1.32
LINC-ROR-201ENST00000553704 NFATC2Q13469 925 aa6.78□□□□□ -1.32
LINC-ROR-201ENST00000553704 RBM48Q5RL73 367 aaKnown RBP6.78□□□□□ -1.32
LINC-ROR-201ENST00000553704 RGMBQ6NW40 437 aa6.78□□□□□ -1.32
LINC-ROR-201ENST00000553704 DCDC5Q6ZRR9 648 aa6.78□□□□□ -1.32
LINC-ROR-201ENST00000553704 GALNT5Q7Z7M9 940 aa6.78□□□□□ -1.32
LINC-ROR-201ENST00000553704 GPR149Q86SP6 731 aa6.78□□□□□ -1.32
LINC-ROR-201ENST00000553704 TSPAN33Q86UF1 283 aa6.78□□□□□ -1.32
LINC-ROR-201ENST00000553704 CENPSQ8N2Z9 138 aa6.78□□□□□ -1.32
LINC-ROR-201ENST00000553704 RNF175Q8N4F7 328 aa6.78□□□□□ -1.32
LINC-ROR-201ENST00000553704 ZBTB2Q8N680 514 aa6.78□□□□□ -1.32
LINC-ROR-201ENST00000553704 TERB1Q8NA31 727 aa6.78□□□□□ -1.32
LINC-ROR-201ENST00000553704 DBF4BQ8NFT6 615 aa6.78□□□□□ -1.32
LINC-ROR-201ENST00000553704 MUL1Q969V5 352 aa6.78□□□□□ -1.32
LINC-ROR-201ENST00000553704 CNDP2Q96KP4 475 aaKnown RBP6.78□□□□□ -1.32
LINC-ROR-201ENST00000553704 ZBTB18Q99592 522 aa6.78□□□□□ -1.32
LINC-ROR-201ENST00000553704 FEM1AQ9BSK4 669 aa6.78□□□□□ -1.32
LINC-ROR-201ENST00000553704 TTPALQ9BTX7 342 aa6.78□□□□□ -1.32
LINC-ROR-201ENST00000553704 UGT2B28Q9BY64 529 aa6.78□□□□□ -1.32
LINC-ROR-201ENST00000553704 FAM126AQ9BYI3 521 aaPredicted RBP6.78□□□□□ -1.32
LINC-ROR-201ENST00000553704 ARMC7Q9H6L4 198 aa6.78□□□□□ -1.32
LINC-ROR-201ENST00000553704 ASB8Q9H765 288 aa6.78□□□□□ -1.32
LINC-ROR-201ENST00000553704 LRTM1Q9HBL6 345 aa6.78□□□□□ -1.32
LINC-ROR-201ENST00000553704 TBCCD1Q9NVR7 557 aa6.78□□□□□ -1.32
LINC-ROR-201ENST00000553704 USE1Q9NZ43 259 aa6.78□□□□□ -1.32
LINC-ROR-201ENST00000553704 PDE10AQ9Y233 779 aa6.78□□□□□ -1.32
LINC-ROR-201ENST00000553704 EIF3LQ9Y262 564 aaKnown RBP6.78□□□□□ -1.32
LINC-ROR-201ENST00000553704 ANGPTL3Q9Y5C1 460 aa6.78□□□□□ -1.32
LINC-ROR-201ENST00000553704 PCDHB1Q9Y5F3 818 aa6.78□□□□□ -1.32
LINC-ROR-201ENST00000553704 OR51B4Q9Y5P0 310 aa6.78□□□□□ -1.32
LINC-ROR-201ENST00000553704 NUP214P35658 2090 aaPredicted RBP6.77□□□□□ -1.33
LINC-ROR-201ENST00000553704 CREG1O75629 220 aa6.77□□□□□ -1.33
LINC-ROR-201ENST00000553704 LRATO95237 230 aa6.77□□□□□ -1.33
LINC-ROR-201ENST00000553704 BCL10O95999 233 aa6.77□□□□□ -1.33
LINC-ROR-201ENST00000553704 PDYNP01213 254 aa6.77□□□□□ -1.33
LINC-ROR-201ENST00000553704 CYP4B1P13584 511 aa6.77□□□□□ -1.33
LINC-ROR-201ENST00000553704 BPIP17213 487 aa6.77□□□□□ -1.33
LINC-ROR-201ENST00000553704 PCMT1P22061 227 aa6.77□□□□□ -1.33
LINC-ROR-201ENST00000553704 RPS3P23396 243 aaKnown RBP eCLIP6.77□□□□□ -1.33
LINC-ROR-201ENST00000553704 ACRV1P26436 265 aa6.77□□□□□ -1.33
LINC-ROR-201ENST00000553704 PTPN6P29350 595 aa6.77□□□□□ -1.33
LINC-ROR-201ENST00000553704 OPRL1P41146 370 aa6.77□□□□□ -1.33
LINC-ROR-201ENST00000553704 NEK2P51955 445 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms