RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 NIPSNAP2O75323 286 aa17.63■□□□□ 0.41
SHMT2-206ENST00000553529 BANF1O75531 89 aa17.63■□□□□ 0.41
SHMT2-206ENST00000553529 CHRM5P08912 532 aaPredicted RBP17.63■□□□□ 0.41
SHMT2-206ENST00000553529 EIF3BP55884 814 aaKnown RBP17.63■□□□□ 0.41
SHMT2-206ENST00000553529 ACY1Q03154 408 aa17.63■□□□□ 0.41
SHMT2-206ENST00000553529 CHAF1BQ13112 559 aa17.63■□□□□ 0.41
SHMT2-206ENST00000553529 PTCHD3Q3KNS1 767 aa17.63■□□□□ 0.41
SHMT2-206ENST00000553529 CPZQ66K79 652 aa17.63■□□□□ 0.41
SHMT2-206ENST00000553529 LRRC8BQ6P9F7 803 aa17.63■□□□□ 0.41
SHMT2-206ENST00000553529 SPESP1Q6UW49 350 aa17.63■□□□□ 0.41
SHMT2-206ENST00000553529 OTUD6BQ8N6M0 293 aa17.63■□□□□ 0.41
SHMT2-206ENST00000553529 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.63■□□□□ 0.41
SHMT2-206ENST00000553529 CHST8Q9H2A9 424 aa17.63■□□□□ 0.41
SHMT2-206ENST00000553529 ACTL8Q9H568 366 aa17.63■□□□□ 0.41
SHMT2-206ENST00000553529 ZKSCAN5Q9Y2L8 839 aa17.63■□□□□ 0.41
SHMT2-206ENST00000553529 ZNF462Q96JM2 2506 aa17.62■□□□□ 0.41
SHMT2-206ENST00000553529 FER1L5A0AVI2 2057 aa17.62■□□□□ 0.41
SHMT2-206ENST00000553529 GCN1Q92616 2671 aaKnown RBP17.62■□□□□ 0.41
SHMT2-206ENST00000553529 PIPSLA2A3N6 862 aa17.62■□□□□ 0.41
SHMT2-206ENST00000553529 TPSB2P20231 275 aa17.62■□□□□ 0.41
SHMT2-206ENST00000553529 AOAHP28039 575 aa17.62■□□□□ 0.41
SHMT2-206ENST00000553529 FMO4P31512 558 aa17.62■□□□□ 0.41
SHMT2-206ENST00000553529 COILP38432 576 aaPredicted RBP17.62■□□□□ 0.41
SHMT2-206ENST00000553529 GABRA4P48169 554 aa17.62■□□□□ 0.41
SHMT2-206ENST00000553529 YBX1P67809 324 aaKnown RBP17.62■□□□□ 0.41
SHMT2-206ENST00000553529 KCNAB2Q13303 367 aa17.62■□□□□ 0.41
SHMT2-206ENST00000553529 TPSAB1Q15661 275 aa17.62■□□□□ 0.41
SHMT2-206ENST00000553529 PLEKHS1Q5SXH7 462 aa17.62■□□□□ 0.41
SHMT2-206ENST00000553529 KMT5CQ86Y97 462 aa17.62■□□□□ 0.41
SHMT2-206ENST00000553529 SLC22A15Q8IZD6 547 aa17.62■□□□□ 0.41
SHMT2-206ENST00000553529 DTWD1Q8N5C7 304 aa17.62■□□□□ 0.41
SHMT2-206ENST00000553529 OR5K2Q8NHB8 316 aa17.62■□□□□ 0.41
SHMT2-206ENST00000553529 MR1Q95460 341 aa17.62■□□□□ 0.41
SHMT2-206ENST00000553529 OSBPL9Q96SU4 736 aa17.62■□□□□ 0.41
SHMT2-206ENST00000553529 SLC30A3Q99726 388 aa17.62■□□□□ 0.41
SHMT2-206ENST00000553529 KIFC1Q9BW19 673 aa17.62■□□□□ 0.41
SHMT2-206ENST00000553529 TRIM55Q9BYV6 548 aa17.62■□□□□ 0.41
SHMT2-206ENST00000553529 SPRTNQ9H040 489 aaPredicted RBP17.62■□□□□ 0.41
SHMT2-206ENST00000553529 TRIT1Q9H3H1 467 aaKnown RBP17.62■□□□□ 0.41
SHMT2-206ENST00000553529 C1GALT1Q9NS00 363 aa17.62■□□□□ 0.41
SHMT2-206ENST00000553529 KCND1Q9NSA2 647 aa17.62■□□□□ 0.41
SHMT2-206ENST00000553529 PADI1Q9ULC6 663 aa17.62■□□□□ 0.41
SHMT2-206ENST00000553529 TNRC6AQ8NDV7 1962 aaKnown RBP17.61■□□□□ 0.41
SHMT2-206ENST00000553529 SPENQ96T58 3664 aaKnown RBP17.61■□□□□ 0.41
SHMT2-206ENST00000553529 C2orf74A8MZ97 194 aa17.61■□□□□ 0.41
SHMT2-206ENST00000553529 GPC4O75487 556 aa17.61■□□□□ 0.41
SHMT2-206ENST00000553529 PSMB5P28074 263 aa17.61■□□□□ 0.41
SHMT2-206ENST00000553529 PKLRP30613 574 aa17.61■□□□□ 0.41
SHMT2-206ENST00000553529 CCDC137Q6PK04 289 aaKnown RBP17.61■□□□□ 0.41
SHMT2-206ENST00000553529 TBC1D21Q8IYX1 336 aa17.61■□□□□ 0.41
SHMT2-206ENST00000553529 BIRC8Q96P09 236 aa17.61■□□□□ 0.41
SHMT2-206ENST00000553529 IL22Q9GZX6 179 aa17.61■□□□□ 0.41
SHMT2-206ENST00000553529 GEMIN8Q9NWZ8 242 aaKnown RBP17.61■□□□□ 0.41
SHMT2-206ENST00000553529 BFARQ9NZS9 450 aa17.61■□□□□ 0.41
SHMT2-206ENST00000553529 SOX13Q9UN79 622 aa17.61■□□□□ 0.41
SHMT2-206ENST00000553529 CRYL1Q9Y2S2 319 aa17.61■□□□□ 0.41
SHMT2-206ENST00000553529 MASP2O00187 686 aa17.6■□□□□ 0.41
SHMT2-206ENST00000553529 PRMT5O14744 637 aaPredicted RBP17.6■□□□□ 0.41
SHMT2-206ENST00000553529 FANCGO15287 622 aa17.6■□□□□ 0.41
SHMT2-206ENST00000553529 CPNE3O75131 537 aaKnown RBP17.6■□□□□ 0.41
SHMT2-206ENST00000553529 CREG1O75629 220 aa17.6■□□□□ 0.41
SHMT2-206ENST00000553529 PDGFAP04085 211 aa17.6■□□□□ 0.41
SHMT2-206ENST00000553529 RORAP35398 523 aa17.6■□□□□ 0.41
SHMT2-206ENST00000553529 CCR10P46092 362 aa17.6■□□□□ 0.41
SHMT2-206ENST00000553529 NPY2RP49146 381 aa17.6■□□□□ 0.41
SHMT2-206ENST00000553529 SLC9A5Q14940 896 aa17.6■□□□□ 0.41
SHMT2-206ENST00000553529 CYP1B1Q16678 543 aa17.6■□□□□ 0.41
SHMT2-206ENST00000553529 C1orf189Q5VU69 101 aa17.6■□□□□ 0.41
SHMT2-206ENST00000553529 LYPLAL1Q5VWZ2 237 aa17.6■□□□□ 0.41
SHMT2-206ENST00000553529 PTRHD1Q6GMV3 140 aaKnown RBP17.6■□□□□ 0.41
SHMT2-206ENST00000553529 CNSTQ6PJW8 725 aa17.6■□□□□ 0.41
SHMT2-206ENST00000553529 FAM198BQ6UWH4 519 aa17.6■□□□□ 0.41
SHMT2-206ENST00000553529 CENPUQ71F23 418 aa17.6■□□□□ 0.41
SHMT2-206ENST00000553529 NLRP9Q7RTR0 991 aa17.6■□□□□ 0.41
SHMT2-206ENST00000553529 DENND6AQ8IWF6 608 aa17.6■□□□□ 0.41
SHMT2-206ENST00000553529 C19orf47Q8N9M1 422 aaKnown RBP17.6■□□□□ 0.41
SHMT2-206ENST00000553529 MAIP1Q8WWC4 291 aa17.6■□□□□ 0.41
SHMT2-206ENST00000553529 LPGAT1Q92604 370 aa17.6■□□□□ 0.41
SHMT2-206ENST00000553529 SGSM3Q96HU1 749 aa17.6■□□□□ 0.41
SHMT2-206ENST00000553529 CARD6Q9BX69 1037 aa17.6■□□□□ 0.41
SHMT2-206ENST00000553529 TWSG1Q9GZX9 223 aa17.6■□□□□ 0.41
SHMT2-206ENST00000553529 PCMTD2Q9NV79 361 aa17.6■□□□□ 0.41
SHMT2-206ENST00000553529 JRKLQ9Y4A0 524 aa17.6■□□□□ 0.41
SHMT2-206ENST00000553529 KCNMB2Q9Y691 235 aa17.6■□□□□ 0.41
SHMT2-206ENST00000553529 COL6A6A6NMZ7 2263 aa17.6■□□□□ 0.41
SHMT2-206ENST00000553529 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.59■□□□□ 0.41
SHMT2-206ENST00000553529 ISM1B1AKI9 464 aa17.59■□□□□ 0.41
SHMT2-206ENST00000553529 H3BMH7 237 aa17.59■□□□□ 0.41
SHMT2-206ENST00000553529 CAPN1P07384 714 aa17.59■□□□□ 0.41
SHMT2-206ENST00000553529 CCNYL3P0C7X3 344 aa17.59■□□□□ 0.41
SHMT2-206ENST00000553529 MAGEA6P43360 314 aa17.59■□□□□ 0.41
SHMT2-206ENST00000553529 TMTC4Q5T4D3 741 aa17.59■□□□□ 0.41
SHMT2-206ENST00000553529 CASC4Q6P4E1 433 aa17.59■□□□□ 0.41
SHMT2-206ENST00000553529 DSELQ8IZU8 1212 aa17.59■□□□□ 0.41
SHMT2-206ENST00000553529 ZNF669Q96BR6 464 aaPredicted RBP17.59■□□□□ 0.41
SHMT2-206ENST00000553529 ABHD17AQ96GS6 310 aa17.59■□□□□ 0.41
SHMT2-206ENST00000553529 PWWP2AQ96N64 755 aa17.59■□□□□ 0.41
SHMT2-206ENST00000553529 SERPINB12Q96P63 405 aa17.59■□□□□ 0.41
SHMT2-206ENST00000553529 SLC25A18Q9H1K4 315 aa17.59■□□□□ 0.41
SHMT2-206ENST00000553529 SLC17A6Q9P2U8 582 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms