RNA–Protein interactions for RNA: ENST00000553508.5

PCNX1-205, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 645 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-205ENST00000553508 ZNF554Q86TJ5 538 aa5.9□□□□□ -1.46
PCNX1-205ENST00000553508 NSL1Q96IY1 281 aa5.9□□□□□ -1.46
PCNX1-205ENST00000553508 OR6C1Q96RD1 312 aa5.9□□□□□ -1.46
PCNX1-205ENST00000553508 ACKR4Q9NPB9 350 aa5.9□□□□□ -1.46
PCNX1-205ENST00000553508 SUCLA2Q9P2R7 463 aaPredicted RBP5.9□□□□□ -1.46
PCNX1-205ENST00000553508 CACNG5Q9UF02 275 aa5.9□□□□□ -1.46
PCNX1-205ENST00000553508 ZC3H13Q5T200 1668 aaKnown RBP5.9□□□□□ -1.47
PCNX1-205ENST00000553508 ZNF644Q9H582 1327 aaPredicted RBP5.9□□□□□ -1.47
PCNX1-205ENST00000553508 DNMT1P26358 1616 aaKnown RBP5.89□□□□□ -1.47
PCNX1-205ENST00000553508 LNP1A1A4G5 178 aa5.89□□□□□ -1.47
PCNX1-205ENST00000553508 TOM1O60784 492 aa5.89□□□□□ -1.47
PCNX1-205ENST00000553508 WDHD1O75717 1129 aaPredicted RBP5.89□□□□□ -1.47
PCNX1-205ENST00000553508 GABRA5P31644 462 aa5.89□□□□□ -1.47
PCNX1-205ENST00000553508 SP3Q02447 781 aa5.89□□□□□ -1.47
PCNX1-205ENST00000553508 CREB5Q02930 508 aa5.89□□□□□ -1.47
PCNX1-205ENST00000553508 LGALS3BPQ08380 585 aa5.89□□□□□ -1.47
PCNX1-205ENST00000553508 DMPKQ09013 629 aa5.89□□□□□ -1.47
PCNX1-205ENST00000553508 RRS1Q15050 365 aaKnown RBP5.89□□□□□ -1.47
PCNX1-205ENST00000553508 SLC16A9Q7RTY1 509 aa5.89□□□□□ -1.47
PCNX1-205ENST00000553508 SZRD1Q7Z422 152 aa5.89□□□□□ -1.47
PCNX1-205ENST00000553508 LDB1Q86U70 411 aaPredicted RBP5.89□□□□□ -1.47
PCNX1-205ENST00000553508 CPSF7Q8N684 471 aaKnown RBP5.89□□□□□ -1.47
PCNX1-205ENST00000553508 KBTBD8Q8NFY9 601 aa5.89□□□□□ -1.47
PCNX1-205ENST00000553508 OR1J1Q8NGS3 322 aa5.89□□□□□ -1.47
PCNX1-205ENST00000553508 OLIG1Q8TAK6 271 aa5.89□□□□□ -1.47
PCNX1-205ENST00000553508 FAM120BQ96EK7 910 aaKnown RBP5.89□□□□□ -1.47
PCNX1-205ENST00000553508 PAFAH2Q99487 392 aa5.89□□□□□ -1.47
PCNX1-205ENST00000553508 SDF4Q9BRK5 362 aa5.89□□□□□ -1.47
PCNX1-205ENST00000553508 FGF22Q9HCT0 170 aa5.89□□□□□ -1.47
PCNX1-205ENST00000553508 BLOC1S4Q9NUP1 217 aa5.89□□□□□ -1.47
PCNX1-205ENST00000553508 OSER1Q9NX31 292 aa5.89□□□□□ -1.47
PCNX1-205ENST00000553508 VPS8Q8N3P4 1428 aa5.89□□□□□ -1.47
PCNX1-205ENST00000553508 EIF2AK4Q9P2K8 1649 aaKnown RBP5.88□□□□□ -1.47
PCNX1-205ENST00000553508 A0A087X002 238 aa5.88□□□□□ -1.47
PCNX1-205ENST00000553508 E9PI62 339 aa5.88□□□□□ -1.47
PCNX1-205ENST00000553508 SH2B2O14492 632 aaPredicted RBP5.88□□□□□ -1.47
PCNX1-205ENST00000553508 PNRC1Q12796 327 aaPredicted RBP5.88□□□□□ -1.47
PCNX1-205ENST00000553508 DUSP28Q4G0W2 176 aa5.88□□□□□ -1.47
PCNX1-205ENST00000553508 IGSF11Q5DX21 431 aa5.88□□□□□ -1.47
PCNX1-205ENST00000553508 CYP4A22Q5TCH4 519 aa5.88□□□□□ -1.47
PCNX1-205ENST00000553508 TMCO3Q6UWJ1 677 aa5.88□□□□□ -1.47
PCNX1-205ENST00000553508 HAUS6Q7Z4H7 955 aa5.88□□□□□ -1.47
PCNX1-205ENST00000553508 FBXO39Q8N4B4 442 aa5.88□□□□□ -1.47
PCNX1-205ENST00000553508 OR2AJ1Q8NGZ0 328 aa5.88□□□□□ -1.47
PCNX1-205ENST00000553508 PRAC1Q96KF2 57 aa5.88□□□□□ -1.47
PCNX1-205ENST00000553508 FNDC11Q9BVV2 318 aa5.88□□□□□ -1.47
PCNX1-205ENST00000553508 GHITMQ9H3K2 345 aa5.88□□□□□ -1.47
PCNX1-205ENST00000553508 KCNK15Q9H427 330 aa5.88□□□□□ -1.47
PCNX1-205ENST00000553508 PYGO1Q9Y3Y4 419 aa5.88□□□□□ -1.47
PCNX1-205ENST00000553508 RIPK3Q9Y572 518 aa5.88□□□□□ -1.47
PCNX1-205ENST00000553508 MIA2Q96PC5 1412 aa5.88□□□□□ -1.47
PCNX1-205ENST00000553508 SHANK2Q9UPX8 1470 aa5.88□□□□□ -1.47
PCNX1-205ENST00000553508 UGGT1Q9NYU2 1555 aa5.88□□□□□ -1.47
PCNX1-205ENST00000553508 DEPDC5O75140 1603 aa5.88□□□□□ -1.47
PCNX1-205ENST00000553508 RNF17Q9BXT8 1623 aaKnown RBP5.88□□□□□ -1.47
PCNX1-205ENST00000553508 OR2A25A4D2G3 310 aa5.87□□□□□ -1.47
PCNX1-205ENST00000553508 AGAP14A8MT82 685 aa5.87□□□□□ -1.47
PCNX1-205ENST00000553508 PAPSS1O43252 624 aaPredicted RBP5.87□□□□□ -1.47
PCNX1-205ENST00000553508 XRCC3O43542 346 aa5.87□□□□□ -1.47
PCNX1-205ENST00000553508 NADKO95544 446 aaPredicted RBP5.87□□□□□ -1.47
PCNX1-205ENST00000553508 NKX2-1P43699 371 aaPredicted RBP5.87□□□□□ -1.47
PCNX1-205ENST00000553508 MDH1BQ5I0G3 518 aa5.87□□□□□ -1.47
PCNX1-205ENST00000553508 GRTP1Q5TC63 336 aa5.87□□□□□ -1.47
PCNX1-205ENST00000553508 BHLHB9Q6PI77 547 aa5.87□□□□□ -1.47
PCNX1-205ENST00000553508 RNF128Q8TEB7 428 aa5.87□□□□□ -1.47
PCNX1-205ENST00000553508 HSD17B8Q92506 261 aa5.87□□□□□ -1.47
PCNX1-205ENST00000553508 SGK494Q96LW2 274 aa5.87□□□□□ -1.47
PCNX1-205ENST00000553508 ZNF599Q96NL3 588 aa5.87□□□□□ -1.47
PCNX1-205ENST00000553508 CDRT15Q96T59 188 aa5.87□□□□□ -1.47
PCNX1-205ENST00000553508 ASCL2Q99929 193 aa5.87□□□□□ -1.47
PCNX1-205ENST00000553508 SPATC1LQ9H0A9 340 aa5.87□□□□□ -1.47
PCNX1-205ENST00000553508 WDR13Q9H1Z4 485 aa5.87□□□□□ -1.47
PCNX1-205ENST00000553508 ZNF71Q9NQZ8 489 aaPredicted RBP5.87□□□□□ -1.47
PCNX1-205ENST00000553508 ZNF148Q9UQR1 794 aa5.87□□□□□ -1.47
PCNX1-205ENST00000553508 PTRH2Q9Y3E5 179 aaKnown RBP5.87□□□□□ -1.47
PCNX1-205ENST00000553508 ASTN2O75129 1339 aaPredicted RBP5.87□□□□□ -1.47
PCNX1-205ENST00000553508 NPHP4O75161 1426 aaPredicted RBP5.87□□□□□ -1.47
PCNX1-205ENST00000553508 MYOM3Q5VTT5 1437 aa5.87□□□□□ -1.47
PCNX1-205ENST00000553508 LRRC9Q6ZRR7 1453 aa5.87□□□□□ -1.47
PCNX1-205ENST00000553508 MAP3K1Q13233 1512 aa5.87□□□□□ -1.47
PCNX1-205ENST00000553508 MAST1Q9Y2H9 1570 aa5.87□□□□□ -1.47
PCNX1-205ENST00000553508 NEURL4Q96JN8 1562 aa5.86□□□□□ -1.47
PCNX1-205ENST00000553508 ABCC3O15438 1527 aa5.86□□□□□ -1.47
PCNX1-205ENST00000553508 MED14O60244 1454 aa5.86□□□□□ -1.47
PCNX1-205ENST00000553508 KANK1Q14678 1352 aa5.86□□□□□ -1.47
PCNX1-205ENST00000553508 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5.86□□□□□ -1.47
PCNX1-205ENST00000553508 SOS1Q07889 1333 aaPredicted RBP5.86□□□□□ -1.47
PCNX1-205ENST00000553508 GIMAP1-GIMAP5A0A087WTJ2 511 aa5.86□□□□□ -1.47
PCNX1-205ENST00000553508 CREG1O75629 220 aa5.86□□□□□ -1.47
PCNX1-205ENST00000553508 GJB3O75712 270 aa5.86□□□□□ -1.47
PCNX1-205ENST00000553508 EML2O95834 649 aa5.86□□□□□ -1.47
PCNX1-205ENST00000553508 EDN1P05305 212 aa5.86□□□□□ -1.47
PCNX1-205ENST00000553508 VPREB1P12018 145 aa5.86□□□□□ -1.47
PCNX1-205ENST00000553508 WNT5AP41221 380 aa5.86□□□□□ -1.47
PCNX1-205ENST00000553508 CXCL9Q07325 125 aa5.86□□□□□ -1.47
PCNX1-205ENST00000553508 FAM205BPQ63HN1 556 aa5.86□□□□□ -1.47
PCNX1-205ENST00000553508 FIGLAQ6QHK4 219 aa5.86□□□□□ -1.47
PCNX1-205ENST00000553508 POC5Q8NA72 575 aa5.86□□□□□ -1.47
PCNX1-205ENST00000553508 ZNF653Q96CK0 615 aa5.86□□□□□ -1.47
PCNX1-205ENST00000553508 GIMAP5Q96F15 307 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms