RNA–Protein interactions for RNA: ENST00000551316.1

SNRPF-203, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-203ENST00000551316 FMO1Q01740 532 aa12.85□□□□□ -0.35
SNRPF-203ENST00000551316 KLC1Q07866 573 aa12.85□□□□□ -0.35
SNRPF-203ENST00000551316 TMEM115Q12893 351 aaPredicted RBP12.85□□□□□ -0.35
SNRPF-203ENST00000551316 PRKAA1Q13131 559 aa12.85□□□□□ -0.35
SNRPF-203ENST00000551316 ATP13A5Q4VNC0 1218 aa12.85□□□□□ -0.35
SNRPF-203ENST00000551316 KRTCAP3Q53RY4 240 aa12.85□□□□□ -0.35
SNRPF-203ENST00000551316 ANKRD20A8PQ5CZ79 823 aa12.85□□□□□ -0.35
SNRPF-203ENST00000551316 RALGPS1Q5JS13 557 aa12.85□□□□□ -0.35
SNRPF-203ENST00000551316 NAPRTQ6XQN6 538 aa12.85□□□□□ -0.35
SNRPF-203ENST00000551316 ADGRF3Q8IZF5 1079 aa12.85□□□□□ -0.35
SNRPF-203ENST00000551316 FLVCR1-AS1Q8TAF5 88 aa12.85□□□□□ -0.35
SNRPF-203ENST00000551316 ARRDC2Q8TBH0 407 aa12.85□□□□□ -0.35
SNRPF-203ENST00000551316 TMEM125Q96AQ2 219 aa12.85□□□□□ -0.35
SNRPF-203ENST00000551316 Q96MF0 132 aa12.85□□□□□ -0.35
SNRPF-203ENST00000551316 MCEEQ96PE7 176 aa12.85□□□□□ -0.35
SNRPF-203ENST00000551316 CRB3Q9BUF7 120 aa12.85□□□□□ -0.35
SNRPF-203ENST00000551316 ANKRD10Q9NXR5 420 aa12.85□□□□□ -0.35
SNRPF-203ENST00000551316 TENM1Q9UKZ4 2725 aa12.84□□□□□ -0.35
SNRPF-203ENST00000551316 VSTM2BA6NLU5 285 aa12.84□□□□□ -0.35
SNRPF-203ENST00000551316 PRRG2O14669 202 aa12.84□□□□□ -0.35
SNRPF-203ENST00000551316 MAN1A2O60476 641 aa12.84□□□□□ -0.35
SNRPF-203ENST00000551316 SERPINA7P05543 415 aa12.84□□□□□ -0.35
SNRPF-203ENST00000551316 VCLP18206 1134 aa12.84□□□□□ -0.35
SNRPF-203ENST00000551316 ALAS2P22557 587 aa12.84□□□□□ -0.35
SNRPF-203ENST00000551316 HTR7P34969 479 aa12.84□□□□□ -0.35
SNRPF-203ENST00000551316 ZNF143P52747 638 aaPredicted RBP12.84□□□□□ -0.35
SNRPF-203ENST00000551316 NUP107P57740 925 aa12.84□□□□□ -0.35
SNRPF-203ENST00000551316 ZNF33BQ06732 778 aa12.84□□□□□ -0.35
SNRPF-203ENST00000551316 CBLBQ13191 982 aa12.84□□□□□ -0.35
SNRPF-203ENST00000551316 EXOC3L4Q17RC7 722 aa12.84□□□□□ -0.35
SNRPF-203ENST00000551316 TFDP3Q5H9I0 405 aa12.84□□□□□ -0.35
SNRPF-203ENST00000551316 PPP6R3Q5H9R7 873 aaPredicted RBP12.84□□□□□ -0.35
SNRPF-203ENST00000551316 METRNLQ641Q3 311 aa12.84□□□□□ -0.35
SNRPF-203ENST00000551316 ATG9BQ674R7 924 aa12.84□□□□□ -0.35
SNRPF-203ENST00000551316 FCRLBQ6BAA4 426 aa12.84□□□□□ -0.35
SNRPF-203ENST00000551316 GBP6Q6ZN66 633 aa12.84□□□□□ -0.35
SNRPF-203ENST00000551316 LIX1LQ8IVB5 337 aa12.84□□□□□ -0.35
SNRPF-203ENST00000551316 GHDCQ8N2G8 530 aa12.84□□□□□ -0.35
SNRPF-203ENST00000551316 MSANTD4Q8NCY6 345 aa12.84□□□□□ -0.35
SNRPF-203ENST00000551316 C3orf20Q8ND61 904 aa12.84□□□□□ -0.35
SNRPF-203ENST00000551316 GOT1L1Q8NHS2 421 aaPredicted RBP12.84□□□□□ -0.35
SNRPF-203ENST00000551316 LRRN4Q8WUT4 740 aa12.84□□□□□ -0.35
SNRPF-203ENST00000551316 TEKT4Q8WW24 435 aa12.84□□□□□ -0.35
SNRPF-203ENST00000551316 NELFBQ8WX92 580 aa12.84□□□□□ -0.35
SNRPF-203ENST00000551316 SPATA32Q96LK8 384 aa12.84□□□□□ -0.35
SNRPF-203ENST00000551316 PCDHB18PQ96TA0 734 aa12.84□□□□□ -0.35
SNRPF-203ENST00000551316 VPS16Q9H269 839 aa12.84□□□□□ -0.35
SNRPF-203ENST00000551316 PLEKHF2Q9H8W4 249 aa12.84□□□□□ -0.35
SNRPF-203ENST00000551316 PCDH9Q9HC56 1237 aa12.84□□□□□ -0.35
SNRPF-203ENST00000551316 ACTR10Q9NZ32 417 aa12.84□□□□□ -0.35
SNRPF-203ENST00000551316 STMN3Q9NZ72 180 aa12.84□□□□□ -0.35
SNRPF-203ENST00000551316 CWC15Q9P013 229 aaKnown RBP12.84□□□□□ -0.35
SNRPF-203ENST00000551316 NFKBIL1Q9UBC1 381 aaPredicted RBP12.84□□□□□ -0.35
SNRPF-203ENST00000551316 NSG1A0A0A6YYJ2 146 aa12.83□□□□□ -0.36
SNRPF-203ENST00000551316 A0A1B0GX78 115 aa12.83□□□□□ -0.36
SNRPF-203ENST00000551316 RGSL1A5PLK6 1076 aa12.83□□□□□ -0.36
SNRPF-203ENST00000551316 PSMA7O14818 248 aa12.83□□□□□ -0.36
SNRPF-203ENST00000551316 BMP10O95393 424 aa12.83□□□□□ -0.36
SNRPF-203ENST00000551316 ONECUT2O95948 504 aa12.83□□□□□ -0.36
SNRPF-203ENST00000551316 ZSCAN22P10073 491 aaPredicted RBP12.83□□□□□ -0.36
SNRPF-203ENST00000551316 NSG1P42857 185 aa12.83□□□□□ -0.36
SNRPF-203ENST00000551316 ITKQ08881 620 aa12.83□□□□□ -0.36
SNRPF-203ENST00000551316 PCBP2Q15366 365 aaKnown RBP eCLIP12.83□□□□□ -0.36
SNRPF-203ENST00000551316 SYCP1Q15431 976 aa12.83□□□□□ -0.36
SNRPF-203ENST00000551316 KRTAP24-1Q3LI83 254 aa12.83□□□□□ -0.36
SNRPF-203ENST00000551316 ATP13A4Q4VNC1 1196 aa12.83□□□□□ -0.36
SNRPF-203ENST00000551316 VWA3BQ502W6 1294 aa12.83□□□□□ -0.36
SNRPF-203ENST00000551316 EMC4Q5J8M3 183 aa12.83□□□□□ -0.36
SNRPF-203ENST00000551316 MARC1Q5VT66 337 aa12.83□□□□□ -0.36
SNRPF-203ENST00000551316 ALG1LQ6GMV1 187 aa12.83□□□□□ -0.36
SNRPF-203ENST00000551316 ACAD10Q6JQN1 1059 aa12.83□□□□□ -0.36
SNRPF-203ENST00000551316 SPESP1Q6UW49 350 aa12.83□□□□□ -0.36
SNRPF-203ENST00000551316 DAAM2Q86T65 1068 aa12.83□□□□□ -0.36
SNRPF-203ENST00000551316 LAPTM4BQ86VI4 370 aa12.83□□□□□ -0.36
SNRPF-203ENST00000551316 NDUFAF2Q8N183 169 aa12.83□□□□□ -0.36
SNRPF-203ENST00000551316 BEST3Q8N1M1 668 aa12.83□□□□□ -0.36
SNRPF-203ENST00000551316 TEX26Q8N6G2 289 aa12.83□□□□□ -0.36
SNRPF-203ENST00000551316 SUN3Q8TAQ9 357 aa12.83□□□□□ -0.36
SNRPF-203ENST00000551316 FAM57AQ8TBR7 257 aa12.83□□□□□ -0.36
SNRPF-203ENST00000551316 TMEM158Q8WZ71 300 aa12.83□□□□□ -0.36
SNRPF-203ENST00000551316 N4BP2L2Q92802 583 aaPredicted RBP12.83□□□□□ -0.36
SNRPF-203ENST00000551316 SCMH1Q96GD3 660 aa12.83□□□□□ -0.36
SNRPF-203ENST00000551316 FAM81BQ96LP2 452 aa12.83□□□□□ -0.36
SNRPF-203ENST00000551316 SELENOOQ9BVL4 669 aa12.83□□□□□ -0.36
SNRPF-203ENST00000551316 NAA15Q9BXJ9 866 aaKnown RBP12.83□□□□□ -0.36
SNRPF-203ENST00000551316 SRMSQ9H3Y6 488 aa12.83□□□□□ -0.36
SNRPF-203ENST00000551316 NEUROD4Q9HD90 331 aa12.83□□□□□ -0.36
SNRPF-203ENST00000551316 DNPEPQ9ULA0 475 aa12.83□□□□□ -0.36
SNRPF-203ENST00000551316 MAU2Q9Y6X3 613 aa12.83□□□□□ -0.36
SNRPF-203ENST00000551316 CR1P17927 2039 aa12.83□□□□□ -0.36
SNRPF-203ENST00000551316 FFAR3O14843 346 aa12.82□□□□□ -0.36
SNRPF-203ENST00000551316 AURKAO14965 403 aa12.82□□□□□ -0.36
SNRPF-203ENST00000551316 GPR42O15529 346 aa12.82□□□□□ -0.36
SNRPF-203ENST00000551316 PHF1O43189 567 aaPredicted RBP12.82□□□□□ -0.36
SNRPF-203ENST00000551316 DAPK3O43293 454 aa12.82□□□□□ -0.36
SNRPF-203ENST00000551316 ALBP02768 609 aa12.82□□□□□ -0.36
SNRPF-203ENST00000551316 UQCRHP07919 91 aa12.82□□□□□ -0.36
SNRPF-203ENST00000551316 MMP2P08253 660 aa12.82□□□□□ -0.36
SNRPF-203ENST00000551316 UGT2B7P16662 529 aa12.82□□□□□ -0.36
SNRPF-203ENST00000551316 AIF1P55008 147 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms