RNA–Protein interactions for RNA: ENST00000549655.5

BRF1-215, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 1,962 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-215ENST00000549655 ATG10Q9H0Y0 220 aa18.68■□□□□ 0.58
BRF1-215ENST00000549655 MRPL40Q9NQ50 206 aaKnown RBP18.68■□□□□ 0.58
BRF1-215ENST00000549655 ZIM2Q9NZV7 527 aa18.68■□□□□ 0.58
BRF1-215ENST00000549655 ZNF490Q9ULM2 529 aaPredicted RBP18.68■□□□□ 0.58
BRF1-215ENST00000549655 SLC22A14Q9Y267 594 aa18.68■□□□□ 0.58
BRF1-215ENST00000549655 ZFC3H1O60293 1989 aaKnown RBP18.68■□□□□ 0.58
BRF1-215ENST00000549655 SLC28A1O00337 649 aa18.67■□□□□ 0.58
BRF1-215ENST00000549655 DRD3P35462 400 aa18.67■□□□□ 0.58
BRF1-215ENST00000549655 ZFP36L2P47974 494 aaKnown RBP18.67■□□□□ 0.58
BRF1-215ENST00000549655 ENPP2Q13822 863 aa18.67■□□□□ 0.58
BRF1-215ENST00000549655 CPSF6Q16630 551 aaKnown RBP eCLIP18.67■□□□□ 0.58
BRF1-215ENST00000549655 RFTN2Q52LD8 501 aaPredicted RBP18.67■□□□□ 0.58
BRF1-215ENST00000549655 EEF1AKMT2Q5JPI9 291 aaKnown RBP18.67■□□□□ 0.58
BRF1-215ENST00000549655 NEK5Q6P3R8 708 aa18.67■□□□□ 0.58
BRF1-215ENST00000549655 TRIM46Q7Z4K8 759 aa18.67■□□□□ 0.58
BRF1-215ENST00000549655 TRAPPC5Q8IUR0 188 aa18.67■□□□□ 0.58
BRF1-215ENST00000549655 SLC22A15Q8IZD6 547 aa18.67■□□□□ 0.58
BRF1-215ENST00000549655 ZNF513Q8N8E2 541 aaPredicted RBP18.67■□□□□ 0.58
BRF1-215ENST00000549655 FOXJ1Q92949 421 aa18.67■□□□□ 0.58
BRF1-215ENST00000549655 LRCH3Q96II8 777 aa18.67■□□□□ 0.58
BRF1-215ENST00000549655 IL1RL2Q9HB29 575 aa18.67■□□□□ 0.58
BRF1-215ENST00000549655 TRIM39Q9HCM9 518 aa18.67■□□□□ 0.58
BRF1-215ENST00000549655 DNAJC11Q9NVH1 559 aa18.67■□□□□ 0.58
BRF1-215ENST00000549655 GULP1Q9UBP9 304 aa18.67■□□□□ 0.58
BRF1-215ENST00000549655 LRRC42Q9Y546 428 aa18.67■□□□□ 0.58
BRF1-215ENST00000549655 A0A1W2PP18 115 aa18.66■□□□□ 0.58
BRF1-215ENST00000549655 MID1O15344 667 aa18.66■□□□□ 0.58
BRF1-215ENST00000549655 LILRB5O75023 590 aa18.66■□□□□ 0.58
BRF1-215ENST00000549655 BCAS2O75934 225 aaPredicted RBP18.66■□□□□ 0.58
BRF1-215ENST00000549655 ITPKAP23677 461 aa18.66■□□□□ 0.58
BRF1-215ENST00000549655 PDHA2P29803 388 aa18.66■□□□□ 0.58
BRF1-215ENST00000549655 GALK1P51570 392 aa18.66■□□□□ 0.58
BRF1-215ENST00000549655 POLR2JP52435 117 aaKnown RBP18.66■□□□□ 0.58
BRF1-215ENST00000549655 ZNF658BQ4V348 819 aaPredicted RBP18.66■□□□□ 0.58
BRF1-215ENST00000549655 COQ5Q5HYK3 327 aa18.66■□□□□ 0.58
BRF1-215ENST00000549655 IL23RQ5VWK5 629 aa18.66■□□□□ 0.58
BRF1-215ENST00000549655 HOMEZQ8IX15 550 aa18.66■□□□□ 0.58
BRF1-215ENST00000549655 PROKR1Q8TCW9 393 aa18.66■□□□□ 0.58
BRF1-215ENST00000549655 USP7Q93009 1102 aa18.66■□□□□ 0.58
BRF1-215ENST00000549655 VPS33AQ96AX1 596 aa18.66■□□□□ 0.58
BRF1-215ENST00000549655 ANKRD27Q96NW4 1050 aa18.66■□□□□ 0.58
BRF1-215ENST00000549655 NMRK1Q9NWW6 199 aa18.66■□□□□ 0.58
BRF1-215ENST00000549655 TMEM181Q9P2C4 612 aa18.66■□□□□ 0.58
BRF1-215ENST00000549655 ATXN10Q9UBB4 475 aa18.66■□□□□ 0.58
BRF1-215ENST00000549655 BCAP29Q9UHQ4 241 aa18.66■□□□□ 0.58
BRF1-215ENST00000549655 ACOT8O14734 319 aa18.66■□□□□ 0.58
BRF1-215ENST00000549655 NVLO15381 856 aaKnown RBP18.66■□□□□ 0.58
BRF1-215ENST00000549655 KRT6AP02538 564 aa18.66■□□□□ 0.58
BRF1-215ENST00000549655 CATP04040 527 aaKnown RBP18.66■□□□□ 0.58
BRF1-215ENST00000549655 KRT6BP04259 564 aa18.66■□□□□ 0.58
BRF1-215ENST00000549655 G6PDP11413 515 aa18.66■□□□□ 0.58
BRF1-215ENST00000549655 SLC2A4P14672 509 aa18.66■□□□□ 0.58
BRF1-215ENST00000549655 IL12AP29459 219 aa18.66■□□□□ 0.58
BRF1-215ENST00000549655 KRT6CP48668 564 aa18.66■□□□□ 0.58
BRF1-215ENST00000549655 PFN3P60673 137 aa18.66■□□□□ 0.58
BRF1-215ENST00000549655 HMGCS1Q01581 520 aa18.66■□□□□ 0.58
BRF1-215ENST00000549655 CST6Q15828 149 aa18.66■□□□□ 0.58
BRF1-215ENST00000549655 HABP4Q5JVS0 413 aaKnown RBP18.66■□□□□ 0.58
BRF1-215ENST00000549655 CYP20A1Q6UW02 462 aa18.66■□□□□ 0.58
BRF1-215ENST00000549655 AADATQ8N5Z0 425 aa18.66■□□□□ 0.58
BRF1-215ENST00000549655 MTFMTQ96DP5 389 aaKnown RBP18.66■□□□□ 0.58
BRF1-215ENST00000549655 GPATCH1Q9BRR8 931 aaKnown RBP18.66■□□□□ 0.58
BRF1-215ENST00000549655 RSPH9Q9H1X1 276 aaPredicted RBP18.66■□□□□ 0.58
BRF1-215ENST00000549655 TMEM45AQ9NWC5 275 aa18.66■□□□□ 0.58
BRF1-215ENST00000549655 SUCOQ9UBS9 1254 aaKnown RBP18.66■□□□□ 0.58
BRF1-215ENST00000549655 POLR3HQ9Y535 204 aaPredicted RBP18.66■□□□□ 0.58
BRF1-215ENST00000549655 FAM234BA2RU67 622 aa18.65■□□□□ 0.58
BRF1-215ENST00000549655 PRORSD1PA6NEY8 169 aa18.65■□□□□ 0.58
BRF1-215ENST00000549655 CCDC154A6NI56 674 aa18.65■□□□□ 0.58
BRF1-215ENST00000549655 H3BM21 787 aa18.65■□□□□ 0.58
BRF1-215ENST00000549655 BDKRB1P46663 353 aa18.65■□□□□ 0.58
BRF1-215ENST00000549655 SLC7A2P52569 658 aa18.65■□□□□ 0.58
BRF1-215ENST00000549655 ATXN3P54252 364 aaPredicted RBP18.65■□□□□ 0.58
BRF1-215ENST00000549655 SEC13P55735 322 aa18.65■□□□□ 0.58
BRF1-215ENST00000549655 CAMK2GQ13555 558 aaPredicted RBP18.65■□□□□ 0.58
BRF1-215ENST00000549655 GTF2H3Q13889 308 aa18.65■□□□□ 0.58
BRF1-215ENST00000549655 IMPG1Q17R60 797 aa18.65■□□□□ 0.58
BRF1-215ENST00000549655 GGTA1PQ4G0N0 100 aa18.65■□□□□ 0.58
BRF1-215ENST00000549655 SLC44A4Q53GD3 710 aa18.65■□□□□ 0.58
BRF1-215ENST00000549655 SAMD4BQ5PRF9 694 aaKnown RBP18.65■□□□□ 0.58
BRF1-215ENST00000549655 RNF111Q6ZNA4 994 aa18.65■□□□□ 0.58
BRF1-215ENST00000549655 CFAP206Q8IYR0 622 aa18.65■□□□□ 0.58
BRF1-215ENST00000549655 RGL4Q8IZJ4 473 aa18.65■□□□□ 0.58
BRF1-215ENST00000549655 PLA2G15Q8NCC3 412 aa18.65■□□□□ 0.58
BRF1-215ENST00000549655 BHLHE22Q8NFJ8 381 aaPredicted RBP18.65■□□□□ 0.58
BRF1-215ENST00000549655 ASB9Q96DX5 294 aa18.65■□□□□ 0.58
BRF1-215ENST00000549655 FOPNLQ96NB1 174 aa18.65■□□□□ 0.58
BRF1-215ENST00000549655 HOPXQ9BPY8 73 aaPredicted RBP18.65■□□□□ 0.58
BRF1-215ENST00000549655 GID8Q9NWU2 228 aa18.65■□□□□ 0.58
BRF1-215ENST00000549655 CLDND1Q9NY35 253 aa18.65■□□□□ 0.58
BRF1-215ENST00000549655 CD300AQ9UGN4 299 aa18.65■□□□□ 0.58
BRF1-215ENST00000549655 KCNE1BA0A087WTH5 132 aa18.64■□□□□ 0.58
BRF1-215ENST00000549655 ASPDHA6ND91 283 aa18.64■□□□□ 0.58
BRF1-215ENST00000549655 RNASEH1O60930 286 aaKnown RBP18.64■□□□□ 0.58
BRF1-215ENST00000549655 MAPK9P45984 424 aa18.64■□□□□ 0.58
BRF1-215ENST00000549655 RPL38P63173 70 aaKnown RBP18.64■□□□□ 0.58
BRF1-215ENST00000549655 TRIM25Q14258 630 aaKnown RBP18.64■□□□□ 0.58
BRF1-215ENST00000549655 TAF11Q15544 211 aa18.64■□□□□ 0.58
BRF1-215ENST00000549655 MUM1Q2TAK8 710 aa18.64■□□□□ 0.58
BRF1-215ENST00000549655 CCSMST1Q4G0I0 132 aa18.64■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms