RNA–Protein interactions for RNA: ENST00000549490.1

UBE2N-203, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

TSL 2

Gene UBE2N, Length 676 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-203ENST00000549490 NT5DC3Q86UY8 548 aa8.56□□□□□ -1.04
UBE2N-203ENST00000549490 HOOK3Q86VS8 718 aa8.56□□□□□ -1.04
UBE2N-203ENST00000549490 AMIGO1Q86WK6 493 aa8.56□□□□□ -1.04
UBE2N-203ENST00000549490 KBTBD2Q8IY47 623 aa8.56□□□□□ -1.04
UBE2N-203ENST00000549490 CFAP206Q8IYR0 622 aa8.56□□□□□ -1.04
UBE2N-203ENST00000549490 DNAJC22Q8N4W6 341 aa8.56□□□□□ -1.04
UBE2N-203ENST00000549490 PHC3Q8NDX5 983 aa8.56□□□□□ -1.04
UBE2N-203ENST00000549490 CHDHQ8NE62 594 aaPredicted RBP8.56□□□□□ -1.04
UBE2N-203ENST00000549490 OR52E1Q8NGJ3 308 aa8.56□□□□□ -1.04
UBE2N-203ENST00000549490 SPATA22Q8NHS9 363 aa8.56□□□□□ -1.04
UBE2N-203ENST00000549490 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.56□□□□□ -1.04
UBE2N-203ENST00000549490 NRGNQ92686 78 aa8.56□□□□□ -1.04
UBE2N-203ENST00000549490 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.56□□□□□ -1.04
UBE2N-203ENST00000549490 RBM41Q96IZ5 413 aaKnown RBP8.56□□□□□ -1.04
UBE2N-203ENST00000549490 VPS50Q96JG6 964 aa8.56□□□□□ -1.04
UBE2N-203ENST00000549490 LINC00615Q96LM1 132 aaPredicted RBP8.56□□□□□ -1.04
UBE2N-203ENST00000549490 SRPK1Q96SB4 655 aaKnown RBP8.56□□□□□ -1.04
UBE2N-203ENST00000549490 FOXC2Q99958 501 aa8.56□□□□□ -1.04
UBE2N-203ENST00000549490 CCM2Q9BSQ5 444 aa8.56□□□□□ -1.04
UBE2N-203ENST00000549490 CEP41Q9BYV8 373 aa8.56□□□□□ -1.04
UBE2N-203ENST00000549490 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.56□□□□□ -1.043e-6■□□□□ 8.8
UBE2N-203ENST00000549490 SLC26A1Q9H2B4 701 aa8.56□□□□□ -1.04
UBE2N-203ENST00000549490 SOX17Q9H6I2 414 aaPredicted RBP8.56□□□□□ -1.04
UBE2N-203ENST00000549490 ZNF160Q9HCG1 818 aa8.56□□□□□ -1.04
UBE2N-203ENST00000549490 DLL4Q9NR61 685 aa8.56□□□□□ -1.04
UBE2N-203ENST00000549490 IRAK4Q9NWZ3 460 aa8.56□□□□□ -1.04
UBE2N-203ENST00000549490 IL17CQ9P0M4 197 aa8.56□□□□□ -1.04
UBE2N-203ENST00000549490 MYO1AQ9UBC5 1043 aa8.56□□□□□ -1.04
UBE2N-203ENST00000549490 CTSFQ9UBX1 484 aa8.56□□□□□ -1.04
UBE2N-203ENST00000549490 RPH3AQ9Y2J0 694 aaPredicted RBP8.56□□□□□ -1.04
UBE2N-203ENST00000549490 ZNF835Q9Y2P0 537 aa8.56□□□□□ -1.04
UBE2N-203ENST00000549490 DOCK10Q96BY6 2186 aa8.56□□□□□ -1.04
UBE2N-203ENST00000549490 NSD1Q96L73 2696 aaPredicted RBP8.56□□□□□ -1.04
UBE2N-203ENST00000549490 ABCA4P78363 2273 aa8.55□□□□□ -1.04
UBE2N-203ENST00000549490 GLYATL1P3A0A0U1RQE8 302 aa8.55□□□□□ -1.04
UBE2N-203ENST00000549490 A0A1B0GX78 115 aa8.55□□□□□ -1.04
UBE2N-203ENST00000549490 KLHL33A6NCF5 533 aa8.55□□□□□ -1.04
UBE2N-203ENST00000549490 PRR35P0CG20 571 aa8.55□□□□□ -1.04
UBE2N-203ENST00000549490 PYGMP11217 842 aa8.55□□□□□ -1.04
UBE2N-203ENST00000549490 UGT2B7P16662 529 aa8.55□□□□□ -1.04
UBE2N-203ENST00000549490 MSH3P20585 1137 aa8.55□□□□□ -1.04
UBE2N-203ENST00000549490 MX2P20592 715 aa8.55□□□□□ -1.04
UBE2N-203ENST00000549490 AKT1P31749 480 aa8.55□□□□□ -1.04
UBE2N-203ENST00000549490 PPP2R2AP63151 447 aa8.55□□□□□ -1.04
UBE2N-203ENST00000549490 PMP22Q01453 160 aa8.55□□□□□ -1.04
UBE2N-203ENST00000549490 LTBQ06643 244 aa8.55□□□□□ -1.04
UBE2N-203ENST00000549490 FOXD4Q12950 439 aaPredicted RBP8.55□□□□□ -1.04
UBE2N-203ENST00000549490 PRKG2Q13237 762 aa8.55□□□□□ -1.04
UBE2N-203ENST00000549490 PIGHQ14442 188 aaPredicted RBP8.55□□□□□ -1.04
UBE2N-203ENST00000549490 NOMO1Q15155 1222 aa8.55□□□□□ -1.04
UBE2N-203ENST00000549490 BCL7AQ4VC05 210 aa8.55□□□□□ -1.04
UBE2N-203ENST00000549490 ATP13A4Q4VNC1 1196 aa8.55□□□□□ -1.04
UBE2N-203ENST00000549490 ZDHHC20Q5W0Z9 365 aa8.55□□□□□ -1.04
UBE2N-203ENST00000549490 CCDC70Q6NSX1 233 aa8.55□□□□□ -1.04
UBE2N-203ENST00000549490 SARM1Q6SZW1 724 aa8.55□□□□□ -1.04
UBE2N-203ENST00000549490 TTLL10Q6ZVT0 673 aa8.55□□□□□ -1.04
UBE2N-203ENST00000549490 SPPL2CQ8IUH8 684 aa8.55□□□□□ -1.04
UBE2N-203ENST00000549490 SIRT6Q8N6T7 355 aa8.55□□□□□ -1.04
UBE2N-203ENST00000549490 FLVCR1-AS1Q8TAF5 88 aa8.55□□□□□ -1.04
UBE2N-203ENST00000549490 CCDC110Q8TBZ0 833 aa8.55□□□□□ -1.04
UBE2N-203ENST00000549490 BRIX1Q8TDN6 353 aaKnown RBP8.55□□□□□ -1.04
UBE2N-203ENST00000549490 DLG3Q92796 817 aa8.55□□□□□ -1.04
UBE2N-203ENST00000549490 MAGED4Q96JG8 741 aa8.55□□□□□ -1.04
UBE2N-203ENST00000549490 OR2A14Q96R47 310 aa8.55□□□□□ -1.04
UBE2N-203ENST00000549490 MDFIQ99750 246 aa8.55□□□□□ -1.04
UBE2N-203ENST00000549490 SLC25A51Q9H1U9 297 aa8.55□□□□□ -1.04
UBE2N-203ENST00000549490 SMOXQ9NWM0 555 aa8.55□□□□□ -1.04
UBE2N-203ENST00000549490 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.55□□□□□ -1.04
UBE2N-203ENST00000549490 PLCL2Q9UPR0 1127 aa8.55□□□□□ -1.04
UBE2N-203ENST00000549490 SCINQ9Y6U3 715 aa8.55□□□□□ -1.04
UBE2N-203ENST00000549490 PCM1Q15154 2024 aa8.54□□□□□ -1.04
UBE2N-203ENST00000549490 COL6A5A8TX70 2615 aa8.54□□□□□ -1.04
UBE2N-203ENST00000549490 VPS13CQ709C8 3753 aa8.54□□□□□ -1.04
UBE2N-203ENST00000549490 NCOA6Q14686 2063 aaPredicted RBP8.54□□□□□ -1.04
UBE2N-203ENST00000549490 VSTM2BA6NLU5 285 aa8.54□□□□□ -1.04
UBE2N-203ENST00000549490 BUD23O43709 281 aaKnown RBP8.54□□□□□ -1.04
UBE2N-203ENST00000549490 PRAMEF2O60811 474 aa8.54□□□□□ -1.04
UBE2N-203ENST00000549490 PMPCBO75439 489 aa8.54□□□□□ -1.04
UBE2N-203ENST00000549490 PRAMEF1O95521 474 aa8.54□□□□□ -1.04
UBE2N-203ENST00000549490 WDPCPO95876 746 aa8.54□□□□□ -1.04
UBE2N-203ENST00000549490 CCDC172P0C7W6 258 aa8.54□□□□□ -1.04
UBE2N-203ENST00000549490 PIM1P11309 404 aaPredicted RBP8.54□□□□□ -1.04
UBE2N-203ENST00000549490 GZMAP12544 262 aa8.54□□□□□ -1.04
UBE2N-203ENST00000549490 ACPPP15309 386 aa8.54□□□□□ -1.04
UBE2N-203ENST00000549490 IGFBP2P18065 325 aa8.54□□□□□ -1.04
UBE2N-203ENST00000549490 PPIDQ08752 370 aaKnown RBP8.54□□□□□ -1.04
UBE2N-203ENST00000549490 ITGA9Q13797 1035 aa8.54□□□□□ -1.04
UBE2N-203ENST00000549490 SLC14A2Q15849 920 aa8.54□□□□□ -1.04
UBE2N-203ENST00000549490 CDKAL1Q5VV42 579 aa8.54□□□□□ -1.04
UBE2N-203ENST00000549490 PQLC3Q8N755 202 aa8.54□□□□□ -1.04
UBE2N-203ENST00000549490 NIPA2Q8N8Q9 360 aa8.54□□□□□ -1.04
UBE2N-203ENST00000549490 HM13Q8TCT9 377 aa8.54□□□□□ -1.04
UBE2N-203ENST00000549490 ZNF398Q8TD17 642 aa8.54□□□□□ -1.04
UBE2N-203ENST00000549490 THAP3Q8WTV1 239 aaPredicted RBP8.54□□□□□ -1.04
UBE2N-203ENST00000549490 C8orf44Q96CB5 159 aa8.54□□□□□ -1.04
UBE2N-203ENST00000549490 BTBD6Q96KE9 485 aa8.54□□□□□ -1.04
UBE2N-203ENST00000549490 HGH1Q9BTY7 390 aa8.54□□□□□ -1.04
UBE2N-203ENST00000549490 CRB3Q9BUF7 120 aa8.54□□□□□ -1.04
UBE2N-203ENST00000549490 OR52A5Q9H2C5 316 aa8.54□□□□□ -1.04
UBE2N-203ENST00000549490 TRABDQ9H4I3 376 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms