RNA–Protein interactions for RNA: ENST00000548817.1

TROAP-208, Transcript of trophinin associated protein, humanhuman

TSL 3

Gene TROAP, Length 480 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-208ENST00000548817 ITGALP20701 1170 aa8.21□□□□□ -1.1
TROAP-208ENST00000548817 OTX2P32243 289 aa8.21□□□□□ -1.1
TROAP-208ENST00000548817 CD68P34810 354 aaPredicted RBP8.21□□□□□ -1.1
TROAP-208ENST00000548817 CDKN2BP42772 138 aa8.21□□□□□ -1.1
TROAP-208ENST00000548817 CHRNA4P43681 627 aa8.21□□□□□ -1.1
TROAP-208ENST00000548817 ATP5OP48047 213 aa8.21□□□□□ -1.1
TROAP-208ENST00000548817 KPNA2P52292 529 aaKnown RBP8.21□□□□□ -1.1
TROAP-208ENST00000548817 OTUD4Q01804 1114 aaKnown RBP8.21□□□□□ -1.1
TROAP-208ENST00000548817 TLE4Q04727 773 aa8.21□□□□□ -1.1
TROAP-208ENST00000548817 WASHC5Q12768 1159 aa8.21□□□□□ -1.1
TROAP-208ENST00000548817 LLGL1Q15334 1064 aa8.21□□□□□ -1.1
TROAP-208ENST00000548817 TAF1AQ15573 450 aaPredicted RBP8.21□□□□□ -1.1
TROAP-208ENST00000548817 PLEKHS1Q5SXH7 462 aa8.21□□□□□ -1.1
TROAP-208ENST00000548817 DUS1LQ6P1R4 473 aaKnown RBP8.21□□□□□ -1.1
TROAP-208ENST00000548817 FBXO38Q6PIJ6 1188 aa8.21□□□□□ -1.1
TROAP-208ENST00000548817 SARM1Q6SZW1 724 aa8.21□□□□□ -1.1
TROAP-208ENST00000548817 SPOCD1Q6ZMY3 1216 aa8.21□□□□□ -1.1
TROAP-208ENST00000548817 TGIF2LYQ8IUE0 185 aa8.21□□□□□ -1.1
TROAP-208ENST00000548817 SYTL1Q8IYJ3 562 aa8.21□□□□□ -1.1
TROAP-208ENST00000548817 RCOR2Q8IZ40 523 aa8.21□□□□□ -1.1
TROAP-208ENST00000548817 ZNF567Q8N184 647 aa8.21□□□□□ -1.1
TROAP-208ENST00000548817 ZBTB2Q8N680 514 aa8.21□□□□□ -1.1
TROAP-208ENST00000548817 OR4K2Q8NGD2 314 aa8.21□□□□□ -1.1
TROAP-208ENST00000548817 HM13Q8TCT9 377 aa8.21□□□□□ -1.1
TROAP-208ENST00000548817 PPP4R1Q8TF05 950 aa8.21□□□□□ -1.1
TROAP-208ENST00000548817 RBM41Q96IZ5 413 aaKnown RBP8.21□□□□□ -1.1
TROAP-208ENST00000548817 MRGPRX2Q96LB1 330 aa8.21□□□□□ -1.1
TROAP-208ENST00000548817 TRAPPC9Q96Q05 1148 aa8.21□□□□□ -1.1
TROAP-208ENST00000548817 COPS8Q99627 209 aa8.21□□□□□ -1.1
TROAP-208ENST00000548817 DHRS4Q9BTZ2 278 aa8.21□□□□□ -1.1
TROAP-208ENST00000548817 FICDQ9BVA6 458 aa8.21□□□□□ -1.1
TROAP-208ENST00000548817 ZNF552Q9H707 407 aaPredicted RBP8.21□□□□□ -1.1
TROAP-208ENST00000548817 SMOXQ9NWM0 555 aa8.21□□□□□ -1.1
TROAP-208ENST00000548817 POMT2Q9UKY4 750 aa8.21□□□□□ -1.1
TROAP-208ENST00000548817 NOVA2Q9UNW9 492 aaKnown RBP8.21□□□□□ -1.1
TROAP-208ENST00000548817 PIKFYVEQ9Y2I7 2098 aa8.2□□□□□ -1.1
TROAP-208ENST00000548817 C2orf74A8MZ97 194 aa8.2□□□□□ -1.1
TROAP-208ENST00000548817 DDX3YO15523 660 aaKnown RBP8.2□□□□□ -1.1
TROAP-208ENST00000548817 GPR39O43194 453 aa8.2□□□□□ -1.1
TROAP-208ENST00000548817 PSTPIP1O43586 416 aa8.2□□□□□ -1.1
TROAP-208ENST00000548817 JRKO75564 520 aa8.2□□□□□ -1.1
TROAP-208ENST00000548817 SRP72O76094 671 aaKnown RBP8.2□□□□□ -1.1
TROAP-208ENST00000548817 LCA5LO95447 670 aa8.2□□□□□ -1.1
TROAP-208ENST00000548817 AGTP01019 485 aa8.2□□□□□ -1.1
TROAP-208ENST00000548817 COMTP21964 271 aa8.2□□□□□ -1.1
TROAP-208ENST00000548817 CTNNA2P26232 953 aa8.2□□□□□ -1.1
TROAP-208ENST00000548817 PRDX3P30048 256 aaKnown RBP8.2□□□□□ -1.1
TROAP-208ENST00000548817 HADHAP40939 763 aa8.2□□□□□ -1.1
TROAP-208ENST00000548817 RAPSNQ13702 412 aa8.2□□□□□ -1.1
TROAP-208ENST00000548817 ATP1A4Q13733 1029 aa8.2□□□□□ -1.1
TROAP-208ENST00000548817 NCF4Q15080 339 aa8.2□□□□□ -1.1
TROAP-208ENST00000548817 ASTE1Q2TB18 679 aaPredicted RBP8.2□□□□□ -1.1
TROAP-208ENST00000548817 BCL7AQ4VC05 210 aa8.2□□□□□ -1.1
TROAP-208ENST00000548817 TFDP3Q5H9I0 405 aa8.2□□□□□ -1.1
TROAP-208ENST00000548817 MLIPQ5VWP3 458 aa8.2□□□□□ -1.1
TROAP-208ENST00000548817 FAM180AQ6UWF9 173 aa8.2□□□□□ -1.1
TROAP-208ENST00000548817 TAOK1Q7L7X3 1001 aa8.2□□□□□ -1.1
TROAP-208ENST00000548817 DAAM2Q86T65 1068 aa8.2□□□□□ -1.1
TROAP-208ENST00000548817 GALNT16Q8N428 558 aa8.2□□□□□ -1.1
TROAP-208ENST00000548817 BCORP1Q8N888 145 aa8.2□□□□□ -1.1
TROAP-208ENST00000548817 SLC38A9Q8NBW4 561 aa8.2□□□□□ -1.1
TROAP-208ENST00000548817 SPDYE1Q8NFV5 336 aaPredicted RBP8.2□□□□□ -1.1
TROAP-208ENST00000548817 OR1L3Q8NH93 324 aa8.2□□□□□ -1.1
TROAP-208ENST00000548817 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.2□□□□□ -1.1
TROAP-208ENST00000548817 HAUS1Q96CS2 278 aa8.2□□□□□ -1.1
TROAP-208ENST00000548817 CCDC120Q96HB5 630 aa8.2□□□□□ -1.1
TROAP-208ENST00000548817 OXNAD1Q96HP4 312 aaPredicted RBP8.2□□□□□ -1.1
TROAP-208ENST00000548817 LINC00615Q96LM1 132 aaPredicted RBP8.2□□□□□ -1.1
TROAP-208ENST00000548817 RMDN2Q96LZ7 410 aa8.2□□□□□ -1.1
TROAP-208ENST00000548817 PPP1R2P1Q96PQ5 205 aa8.2□□□□□ -1.1
TROAP-208ENST00000548817 ALS2CR12Q96Q35 445 aa8.2□□□□□ -1.1
TROAP-208ENST00000548817 DNAJC7Q99615 494 aa8.2□□□□□ -1.1
TROAP-208ENST00000548817 CXXC4Q9H2H0 198 aa8.2□□□□□ -1.1
TROAP-208ENST00000548817 MVB12BQ9H7P6 319 aa8.2□□□□□ -1.1
TROAP-208ENST00000548817 NHEJ1Q9H9Q4 299 aaPredicted RBP8.2□□□□□ -1.1
TROAP-208ENST00000548817 SPTLC3Q9NUV7 552 aa8.2□□□□□ -1.1
TROAP-208ENST00000548817 IRAK4Q9NWZ3 460 aa8.2□□□□□ -1.1
TROAP-208ENST00000548817 NDOR1Q9UHB4 597 aa8.2□□□□□ -1.1
TROAP-208ENST00000548817 FKBPLQ9UIM3 349 aa8.2□□□□□ -1.1
TROAP-208ENST00000548817 INTUQ9ULD6 942 aa8.2□□□□□ -1.1
TROAP-208ENST00000548817 AAR2Q9Y312 384 aaKnown RBP8.2□□□□□ -1.1
TROAP-208ENST00000548817 HYOU1Q9Y4L1 999 aa8.2□□□□□ -1.1
TROAP-208ENST00000548817 ARL5AQ9Y689 179 aa8.2□□□□□ -1.1
TROAP-208ENST00000548817 AP1M2Q9Y6Q5 423 aa8.2□□□□□ -1.1
TROAP-208ENST00000548817 ABCA4P78363 2273 aa8.2□□□□□ -1.1
TROAP-208ENST00000548817 ZNF469Q96JG9 3925 aaPredicted RBP8.2□□□□□ -1.1
TROAP-208ENST00000548817 CNTRLQ7Z7A1 2325 aa8.2□□□□□ -1.1
TROAP-208ENST00000548817 CACNA1CQ13936 2221 aa8.19□□□□□ -1.1
TROAP-208ENST00000548817 C17orf113A0A1B0GUU1 675 aa8.19□□□□□ -1.1
TROAP-208ENST00000548817 GAPDHSO14556 408 aaPredicted RBP8.19□□□□□ -1.1
TROAP-208ENST00000548817 PCDH17O14917 1159 aa8.19□□□□□ -1.1
TROAP-208ENST00000548817 ZNF749O43361 778 aa8.19□□□□□ -1.1
TROAP-208ENST00000548817 LDB2O43679 373 aa8.19□□□□□ -1.1
TROAP-208ENST00000548817 KDM1AO60341 852 aa8.19□□□□□ -1.1
TROAP-208ENST00000548817 ATXN8OSP0DMR3 200 aa8.19□□□□□ -1.1
TROAP-208ENST00000548817 ATP1B2P14415 290 aaPredicted RBP8.19□□□□□ -1.1
TROAP-208ENST00000548817 PECAM1P16284 738 aaPredicted RBP8.19□□□□□ -1.1
TROAP-208ENST00000548817 RORAP35398 523 aa8.19□□□□□ -1.1
TROAP-208ENST00000548817 CETN2P41208 172 aa8.19□□□□□ -1.1
TROAP-208ENST00000548817 FOLR3P41439 243 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms