RNA–Protein interactions for RNA: ENST00000548130.5

SMARCC2-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 5

Gene SMARCC2, Length 1,238 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-205ENST00000548130 GSDMBQ8TAX9 411 aa8.64□□□□□ -1.03
SMARCC2-205ENST00000548130 FBXO25Q8TCJ0 367 aa8.64□□□□□ -1.03
SMARCC2-205ENST00000548130 PYROXD1Q8WU10 500 aa8.64□□□□□ -1.03
SMARCC2-205ENST00000548130 ZFPM2Q8WW38 1151 aa8.64□□□□□ -1.03
SMARCC2-205ENST00000548130 USP7Q93009 1102 aa8.64□□□□□ -1.03
SMARCC2-205ENST00000548130 ART4Q93070 314 aa8.64□□□□□ -1.03
SMARCC2-205ENST00000548130 ZDHHC12Q96GR4 267 aa8.64□□□□□ -1.03
SMARCC2-205ENST00000548130 NAF1Q96HR8 494 aaKnown RBP8.64□□□□□ -1.03
SMARCC2-205ENST00000548130 C9orf72Q96LT7 481 aa8.64□□□□□ -1.03
SMARCC2-205ENST00000548130 PPM1MQ96MI6 270 aa8.64□□□□□ -1.03
SMARCC2-205ENST00000548130 SLC46A1Q96NT5 459 aa8.64□□□□□ -1.03
SMARCC2-205ENST00000548130 NDNQ99608 321 aa8.64□□□□□ -1.03
SMARCC2-205ENST00000548130 SLC30A3Q99726 388 aa8.64□□□□□ -1.03
SMARCC2-205ENST00000548130 TUBB2BQ9BVA1 445 aa8.64□□□□□ -1.03
SMARCC2-205ENST00000548130 CCDC68Q9H2F9 335 aa8.64□□□□□ -1.03
SMARCC2-205ENST00000548130 TRIT1Q9H3H1 467 aaKnown RBP8.64□□□□□ -1.03
SMARCC2-205ENST00000548130 SRMSQ9H3Y6 488 aa8.64□□□□□ -1.03
SMARCC2-205ENST00000548130 ASCL3Q9NQ33 180 aa8.64□□□□□ -1.03
SMARCC2-205ENST00000548130 HRASLS2Q9NWW9 162 aa8.64□□□□□ -1.03
SMARCC2-205ENST00000548130 DKK4Q9UBT3 224 aa8.64□□□□□ -1.03
SMARCC2-205ENST00000548130 EPHA6Q9UF33 1036 aa8.64□□□□□ -1.03
SMARCC2-205ENST00000548130 MED16Q9Y2X0 877 aa8.64□□□□□ -1.03
SMARCC2-205ENST00000548130 NFS1Q9Y697 457 aa8.64□□□□□ -1.03
SMARCC2-205ENST00000548130 AHCTF1Q8WYP5 2266 aa8.64□□□□□ -1.03
SMARCC2-205ENST00000548130 CACNA1GO43497 2377 aa8.63□□□□□ -1.03
SMARCC2-205ENST00000548130 GSAPA4D1B5 854 aa8.63□□□□□ -1.03
SMARCC2-205ENST00000548130 BTN3A3O00478 584 aa8.63□□□□□ -1.03
SMARCC2-205ENST00000548130 BTN3A1O00481 513 aa8.63□□□□□ -1.03
SMARCC2-205ENST00000548130 KPNA5O15131 536 aa8.63□□□□□ -1.03
SMARCC2-205ENST00000548130 EIF3HO15372 352 aaKnown RBP eCLIP8.63□□□□□ -1.031e-7■■■■■ 33.7
SMARCC2-205ENST00000548130 PRAMEF10O60809 474 aa8.63□□□□□ -1.03
SMARCC2-205ENST00000548130 PIAS1O75925 651 aa8.63□□□□□ -1.03
SMARCC2-205ENST00000548130 DXOO77932 396 aaKnown RBP8.63□□□□□ -1.03
SMARCC2-205ENST00000548130 AHSGP02765 367 aa8.63□□□□□ -1.03
SMARCC2-205ENST00000548130 ITGA2BP08514 1039 aa8.63□□□□□ -1.03
SMARCC2-205ENST00000548130 TPBGLP0DKB5 382 aa8.63□□□□□ -1.03
SMARCC2-205ENST00000548130 FGF3P11487 239 aaPredicted RBP8.63□□□□□ -1.03
SMARCC2-205ENST00000548130 SSTR1P30872 391 aa8.63□□□□□ -1.03
SMARCC2-205ENST00000548130 CLCN7P51798 805 aa8.63□□□□□ -1.03
SMARCC2-205ENST00000548130 KPNA2P52292 529 aaKnown RBP8.63□□□□□ -1.03
SMARCC2-205ENST00000548130 MGAT5Q09328 741 aa8.63□□□□□ -1.03
SMARCC2-205ENST00000548130 PRKAA1Q13131 559 aa8.63□□□□□ -1.03
SMARCC2-205ENST00000548130 CUL1Q13616 776 aa8.63□□□□□ -1.03
SMARCC2-205ENST00000548130 DNTTIP2Q5QJE6 756 aaKnown RBP8.63□□□□□ -1.03
SMARCC2-205ENST00000548130 RBM20Q5T481 1227 aaKnown RBP8.63□□□□□ -1.03
SMARCC2-205ENST00000548130 AMIGO1Q86WK6 493 aa8.63□□□□□ -1.03
SMARCC2-205ENST00000548130 CNTN4Q8IWV2 1026 aa8.63□□□□□ -1.03
SMARCC2-205ENST00000548130 PALM2Q8IXS6 379 aa8.63□□□□□ -1.03
SMARCC2-205ENST00000548130 CEP112Q8N8E3 955 aa8.63□□□□□ -1.03
SMARCC2-205ENST00000548130 OR5K2Q8NHB8 316 aa8.63□□□□□ -1.03
SMARCC2-205ENST00000548130 GABPB2Q8TAK5 448 aaPredicted RBP8.63□□□□□ -1.03
SMARCC2-205ENST00000548130 FGF11Q92914 225 aa8.63□□□□□ -1.03
SMARCC2-205ENST00000548130 PMEPA1Q969W9 287 aa8.63□□□□□ -1.03
SMARCC2-205ENST00000548130 RNF31Q96EP0 1072 aa8.63□□□□□ -1.03
SMARCC2-205ENST00000548130 ZNF578Q96N58 590 aaPredicted RBP8.63□□□□□ -1.03
SMARCC2-205ENST00000548130 IL17FQ96PD4 163 aa8.63□□□□□ -1.03
SMARCC2-205ENST00000548130 GPR21Q99679 349 aa8.63□□□□□ -1.03
SMARCC2-205ENST00000548130 MAP3K3Q99759 626 aa8.63□□□□□ -1.03
SMARCC2-205ENST00000548130 USB1Q9BQ65 265 aaKnown RBP8.63□□□□□ -1.03
SMARCC2-205ENST00000548130 AARSD1Q9BTE6 412 aaKnown RBP8.63□□□□□ -1.03
SMARCC2-205ENST00000548130 RAB33BQ9H082 229 aa8.63□□□□□ -1.03
SMARCC2-205ENST00000548130 TFB2MQ9H5Q4 396 aaKnown RBP8.63□□□□□ -1.03
SMARCC2-205ENST00000548130 PRDM9Q9NQV7 894 aa8.63□□□□□ -1.03
SMARCC2-205ENST00000548130 THSD1Q9NS62 852 aa8.63□□□□□ -1.03
SMARCC2-205ENST00000548130 FOXJ2Q9P0K8 574 aa8.63□□□□□ -1.03
SMARCC2-205ENST00000548130 DMGDHQ9UI17 866 aaKnown RBP8.63□□□□□ -1.03
SMARCC2-205ENST00000548130 ICKQ9UPZ9 632 aa8.63□□□□□ -1.03
SMARCC2-205ENST00000548130 IGHV5-51A0A0C4DH38 117 aa8.62□□□□□ -1.03
SMARCC2-205ENST00000548130 KRT87PA6NCN2 255 aa8.62□□□□□ -1.03
SMARCC2-205ENST00000548130 SRRM3A6NNA2 597 aaPredicted RBP8.62□□□□□ -1.03
SMARCC2-205ENST00000548130 CDRT15L2A8MXV6 281 aa8.62□□□□□ -1.03
SMARCC2-205ENST00000548130 C9orf172C9J069 976 aa8.62□□□□□ -1.03
SMARCC2-205ENST00000548130 VPS26AO75436 327 aa8.62□□□□□ -1.03
SMARCC2-205ENST00000548130 ANKRD34CP0C6C1 535 aa8.62□□□□□ -1.03
SMARCC2-205ENST00000548130 SLC5A2P31639 672 aa8.62□□□□□ -1.03
SMARCC2-205ENST00000548130 PGGT1BP53609 377 aa8.62□□□□□ -1.03
SMARCC2-205ENST00000548130 ERVPABLB-1P60509 514 aa8.62□□□□□ -1.03
SMARCC2-205ENST00000548130 SH3BP2P78314 561 aa8.62□□□□□ -1.03
SMARCC2-205ENST00000548130 TIAL1Q01085 375 aaKnown RBP eCLIP8.62□□□□□ -1.03
SMARCC2-205ENST00000548130 CAV1Q03135 178 aa8.62□□□□□ -1.03
SMARCC2-205ENST00000548130 CBLBQ13191 982 aa8.62□□□□□ -1.03
SMARCC2-205ENST00000548130 FRG1Q14331 258 aaKnown RBP8.62□□□□□ -1.03
SMARCC2-205ENST00000548130 GBX1Q14549 363 aa8.62□□□□□ -1.03
SMARCC2-205ENST00000548130 KLHL38Q2WGJ6 581 aa8.62□□□□□ -1.03
SMARCC2-205ENST00000548130 TTLL9Q3SXZ7 439 aa8.62□□□□□ -1.03
SMARCC2-205ENST00000548130 CCSMST1Q4G0I0 132 aa8.62□□□□□ -1.03
SMARCC2-205ENST00000548130 ANKS6Q68DC2 871 aa8.62□□□□□ -1.03
SMARCC2-205ENST00000548130 IGF2-ASQ6U949 168 aa8.62□□□□□ -1.03
SMARCC2-205ENST00000548130 UNC5DQ6UXZ4 953 aa8.62□□□□□ -1.03
SMARCC2-205ENST00000548130 KIAA0408Q6ZU52 694 aa8.62□□□□□ -1.03
SMARCC2-205ENST00000548130 PRSS42Q7Z5A4 293 aa8.62□□□□□ -1.03
SMARCC2-205ENST00000548130 CLEC14AQ86T13 490 aa8.62□□□□□ -1.03
SMARCC2-205ENST00000548130 TAX1BP1Q86VP1 789 aa8.62□□□□□ -1.03
SMARCC2-205ENST00000548130 DCUN1D3Q8IWE4 304 aa8.62□□□□□ -1.03
SMARCC2-205ENST00000548130 CPNE9Q8IYJ1 553 aa8.62□□□□□ -1.03
SMARCC2-205ENST00000548130 ADGRF3Q8IZF5 1079 aa8.62□□□□□ -1.03
SMARCC2-205ENST00000548130 C2orf73Q8N5S3 287 aaPredicted RBP8.62□□□□□ -1.03
SMARCC2-205ENST00000548130 GPATCH11Q8N954 259 aa8.62□□□□□ -1.03
SMARCC2-205ENST00000548130 LRRN4CLQ8ND94 238 aa8.62□□□□□ -1.03
SMARCC2-205ENST00000548130 SNIP1Q8TAD8 396 aaKnown RBP8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms