RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 LACTB2Q53H82 288 aaPredicted RBP6.5□□□□□ -1.37
SCAF11-211ENST00000547950 PLEKHS1Q5SXH7 462 aa6.5□□□□□ -1.37
SCAF11-211ENST00000547950 SEL1L2Q5TEA6 688 aa6.5□□□□□ -1.37
SCAF11-211ENST00000547950 LCN10Q6JVE6 187 aa6.5□□□□□ -1.37
SCAF11-211ENST00000547950 ASB18Q6ZVZ8 466 aa6.5□□□□□ -1.37
SCAF11-211ENST00000547950 ADGRF3Q8IZF5 1079 aa6.5□□□□□ -1.37
SCAF11-211ENST00000547950 RNF10Q8N5U6 811 aaKnown RBP6.5□□□□□ -1.37
SCAF11-211ENST00000547950 OR5AR1Q8NGP9 310 aa6.5□□□□□ -1.37
SCAF11-211ENST00000547950 OR8K5Q8NH50 307 aa6.5□□□□□ -1.37
SCAF11-211ENST00000547950 OR1L3Q8NH93 324 aa6.5□□□□□ -1.37
SCAF11-211ENST00000547950 CPT1BQ92523 772 aa6.5□□□□□ -1.37
SCAF11-211ENST00000547950 ELMO1Q92556 727 aa6.5□□□□□ -1.37
SCAF11-211ENST00000547950 N4BP2L2Q92802 583 aaPredicted RBP6.5□□□□□ -1.37
SCAF11-211ENST00000547950 HDAC10Q969S8 669 aa6.5□□□□□ -1.37
SCAF11-211ENST00000547950 TTC1Q99614 292 aa6.5□□□□□ -1.37
SCAF11-211ENST00000547950 C19orf43Q9BQ61 176 aa6.5□□□□□ -1.37
SCAF11-211ENST00000547950 OCSTAMPQ9BR26 566 aa6.5□□□□□ -1.37
SCAF11-211ENST00000547950 EPN3Q9H201 632 aa6.5□□□□□ -1.37
SCAF11-211ENST00000547950 CHST8Q9H2A9 424 aa6.5□□□□□ -1.37
SCAF11-211ENST00000547950 TFB2MQ9H5Q4 396 aaKnown RBP6.5□□□□□ -1.37
SCAF11-211ENST00000547950 MVB12BQ9H7P6 319 aa6.5□□□□□ -1.37
SCAF11-211ENST00000547950 FANCEQ9HB96 536 aa6.5□□□□□ -1.37
SCAF11-211ENST00000547950 RAB6BQ9NRW1 208 aa6.5□□□□□ -1.37
SCAF11-211ENST00000547950 ACTR10Q9NZ32 417 aa6.5□□□□□ -1.37
SCAF11-211ENST00000547950 SLC2A6Q9UGQ3 507 aa6.5□□□□□ -1.37
SCAF11-211ENST00000547950 ANAPC2Q9UJX6 822 aa6.5□□□□□ -1.37
SCAF11-211ENST00000547950 POMT2Q9UKY4 750 aa6.5□□□□□ -1.37
SCAF11-211ENST00000547950 ASF1AQ9Y294 204 aa6.5□□□□□ -1.37
SCAF11-211ENST00000547950 TP53TG5Q9Y2B4 290 aa6.5□□□□□ -1.37
SCAF11-211ENST00000547950 MAN2B2Q9Y2E5 1009 aa6.5□□□□□ -1.37
SCAF11-211ENST00000547950 TDRKHQ9Y2W6 561 aaKnown RBP6.5□□□□□ -1.37
SCAF11-211ENST00000547950 PCDHGA6Q9Y5G7 932 aa6.5□□□□□ -1.37
SCAF11-211ENST00000547950 FLNBO75369 2602 aaKnown RBP6.5□□□□□ -1.37
SCAF11-211ENST00000547950 SETXQ7Z333 2677 aaKnown RBP6.5□□□□□ -1.37
SCAF11-211ENST00000547950 ARHGEF17Q96PE2 2063 aaPredicted RBP6.49□□□□□ -1.37
SCAF11-211ENST00000547950 HEATR9A2RTY3 570 aa6.49□□□□□ -1.37
SCAF11-211ENST00000547950 ARGFXA6NJG6 315 aa6.49□□□□□ -1.37
SCAF11-211ENST00000547950 ERI2A8K979 691 aaKnown RBP6.49□□□□□ -1.37
SCAF11-211ENST00000547950 GOLGA6L6A8MZA4 724 aa6.49□□□□□ -1.37
SCAF11-211ENST00000547950 MATN2O00339 956 aa6.49□□□□□ -1.37
SCAF11-211ENST00000547950 LIN7AO14910 233 aaPredicted RBP6.49□□□□□ -1.37
SCAF11-211ENST00000547950 KRT86O43790 486 aa6.49□□□□□ -1.37
SCAF11-211ENST00000547950 RFPL1O75677 317 aa6.49□□□□□ -1.37
SCAF11-211ENST00000547950 RECKO95980 971 aa6.49□□□□□ -1.37
SCAF11-211ENST00000547950 GOT2P00505 430 aaKnown RBP6.49□□□□□ -1.37
SCAF11-211ENST00000547950 APRTP07741 180 aa6.49□□□□□ -1.37
SCAF11-211ENST00000547950 GSTM1P09488 218 aa6.49□□□□□ -1.37
SCAF11-211ENST00000547950 OR56A5P0C7T3 313 aa6.49□□□□□ -1.37
SCAF11-211ENST00000547950 CYP2A7P20853 494 aa6.49□□□□□ -1.37
SCAF11-211ENST00000547950 ADRA1DP25100 572 aa6.49□□□□□ -1.37
SCAF11-211ENST00000547950 CDC25BP30305 580 aa6.49□□□□□ -1.37
SCAF11-211ENST00000547950 FOXN2P32314 431 aa6.49□□□□□ -1.37
SCAF11-211ENST00000547950 FDFT1P37268 417 aa6.49□□□□□ -1.37
SCAF11-211ENST00000547950 GSDMDP57764 484 aa6.49□□□□□ -1.37
SCAF11-211ENST00000547950 GSTM4Q03013 218 aa6.49□□□□□ -1.37
SCAF11-211ENST00000547950 HSPA14Q0VDF9 509 aa6.49□□□□□ -1.37
SCAF11-211ENST00000547950 KLRB1Q12918 225 aa6.49□□□□□ -1.37
SCAF11-211ENST00000547950 ABRQ12979 859 aa6.49□□□□□ -1.37
SCAF11-211ENST00000547950 CHAF1BQ13112 559 aa6.49□□□□□ -1.37
SCAF11-211ENST00000547950 SEMA5AQ13591 1074 aa6.49□□□□□ -1.37
SCAF11-211ENST00000547950 IL10RAQ13651 578 aa6.49□□□□□ -1.37
SCAF11-211ENST00000547950 LAMB3Q13751 1172 aa6.49□□□□□ -1.37
SCAF11-211ENST00000547950 BOP1Q14137 746 aaKnown RBP6.49□□□□□ -1.37
SCAF11-211ENST00000547950 ITIH4Q14624 930 aa6.49□□□□□ -1.37
SCAF11-211ENST00000547950 RPS6KA1Q15418 735 aa6.49□□□□□ -1.37
SCAF11-211ENST00000547950 OASLQ15646 514 aaKnown RBP6.49□□□□□ -1.37
SCAF11-211ENST00000547950 KCTD19Q17RG1 926 aaPredicted RBP6.49□□□□□ -1.37
SCAF11-211ENST00000547950 PTCHD3Q3KNS1 767 aa6.49□□□□□ -1.37
SCAF11-211ENST00000547950 ZNF658BQ4V348 819 aaPredicted RBP6.49□□□□□ -1.37
SCAF11-211ENST00000547950 SYTL3Q4VX76 610 aa6.49□□□□□ -1.37
SCAF11-211ENST00000547950 TSTD2Q5T7W7 516 aa6.49□□□□□ -1.37
SCAF11-211ENST00000547950 FAM69BQ5VUD6 431 aa6.49□□□□□ -1.37
SCAF11-211ENST00000547950 LYPLAL1Q5VWZ2 237 aa6.49□□□□□ -1.37
SCAF11-211ENST00000547950 TCTN3Q6NUS6 607 aa6.49□□□□□ -1.37
SCAF11-211ENST00000547950 UNC5AQ6ZN44 842 aa6.49□□□□□ -1.37
SCAF11-211ENST00000547950 CDHR3Q6ZTQ4 885 aa6.49□□□□□ -1.37
SCAF11-211ENST00000547950 SYVN1Q86TM6 617 aa6.49□□□□□ -1.37
SCAF11-211ENST00000547950 TRIM73Q86UV7 250 aa6.49□□□□□ -1.37
SCAF11-211ENST00000547950 SLC13A5Q86YT5 568 aaPredicted RBP6.49□□□□□ -1.37
SCAF11-211ENST00000547950 GPR135Q8IZ08 494 aa6.49□□□□□ -1.37
SCAF11-211ENST00000547950 CARFQ8N187 725 aa6.49□□□□□ -1.37
SCAF11-211ENST00000547950 C2orf73Q8N5S3 287 aaPredicted RBP6.49□□□□□ -1.37
SCAF11-211ENST00000547950 ENDOVQ8N8Q3 282 aaKnown RBP6.49□□□□□ -1.37
SCAF11-211ENST00000547950 CCDC89Q8N998 374 aa6.49□□□□□ -1.37
SCAF11-211ENST00000547950 GLIS1Q8NBF1 620 aa6.49□□□□□ -1.37
SCAF11-211ENST00000547950 OR13J1Q8NGT2 312 aa6.49□□□□□ -1.37
SCAF11-211ENST00000547950 OR4L1Q8NH43 312 aa6.49□□□□□ -1.37
SCAF11-211ENST00000547950 CFAP61Q8NHU2 1237 aa6.49□□□□□ -1.37
SCAF11-211ENST00000547950 THAP4Q8WY91 577 aa6.49□□□□□ -1.37
SCAF11-211ENST00000547950 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.49□□□□□ -1.37
SCAF11-211ENST00000547950 ZNF778Q96MU6 729 aa6.49□□□□□ -1.37
SCAF11-211ENST00000547950 TRAPPC9Q96Q05 1148 aa6.49□□□□□ -1.37
SCAF11-211ENST00000547950 TRIM55Q9BYV6 548 aa6.49□□□□□ -1.37
SCAF11-211ENST00000547950 ING2Q9H160 280 aa6.49□□□□□ -1.37
SCAF11-211ENST00000547950 ACTR5Q9H9F9 607 aaPredicted RBP6.49□□□□□ -1.37
SCAF11-211ENST00000547950 SYTL2Q9HCH5 934 aa6.49□□□□□ -1.37
SCAF11-211ENST00000547950 LZTFL1Q9NQ48 299 aa6.49□□□□□ -1.37
SCAF11-211ENST00000547950 CHRAC1Q9NRG0 131 aa6.49□□□□□ -1.37
SCAF11-211ENST00000547950 PLAGL1Q9UM63 463 aa6.49□□□□□ -1.37
SCAF11-211ENST00000547950 SNX7Q9UNH6 387 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms