RNA–Protein interactions for RNA: ENST00000546088.5

TAF1D-222, Transcript of TATA-box binding protein associated factor, RNA polymerase I subunit D, human

TSL 3

Gene TAF1D, Length 1,728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TAF1D-222	ENST00000546088	FBXO6	Q9NRD1	293 aa	Predicted RBP	6.31	□□□□□ -1.4
TAF1D-222	ENST00000546088	IARS2	Q9NSE4	1012 aa	Known RBP	6.31	□□□□□ -1.4
TAF1D-222	ENST00000546088	C20orf96	Q9NUD7	363 aa	Predicted RBP	6.31	□□□□□ -1.4
TAF1D-222	ENST00000546088	TRNAU1AP	Q9NX07	287 aa	Known RBP	6.31	□□□□□ -1.4
TAF1D-222	ENST00000546088	GRHL1	Q9NZI5	618 aa		6.31	□□□□□ -1.4
TAF1D-222	ENST00000546088	LRIT1	Q9P2V4	623 aa		6.31	□□□□□ -1.4
TAF1D-222	ENST00000546088	CIDEB	Q9UHD4	219 aa		6.31	□□□□□ -1.4
TAF1D-222	ENST00000546088	UTP11	Q9Y3A2	253 aa	Known RBP	6.31	□□□□□ -1.4
TAF1D-222	ENST00000546088	CSNK1G3	Q9Y6M4	447 aa		6.31	□□□□□ -1.4
TAF1D-222	ENST00000546088	RNF215	Q9Y6U7	377 aa		6.31	□□□□□ -1.4
TAF1D-222	ENST00000546088	TRBV5-4	A0A0C4DH59	114 aa		6.3	□□□□□ -1.4
TAF1D-222	ENST00000546088	ZCWPW2	A0A1B0GU75	182 aa		6.3	□□□□□ -1.4
TAF1D-222	ENST00000546088	AGAP14	A8MT82	685 aa		6.3	□□□□□ -1.4
TAF1D-222	ENST00000546088	KIF2A	O00139	706 aa	Predicted RBP	6.3	□□□□□ -1.4
TAF1D-222	ENST00000546088	PPM1D	O15297	605 aa		6.3	□□□□□ -1.4
TAF1D-222	ENST00000546088	RFPL3	O75679	317 aa		6.3	□□□□□ -1.4
TAF1D-222	ENST00000546088	RALB	P11234	206 aa		6.3	□□□□□ -1.4
TAF1D-222	ENST00000546088	CKMT1A	P12532	417 aa		6.3	□□□□□ -1.4
TAF1D-222	ENST00000546088	MLN	P12872	115 aa		6.3	□□□□□ -1.4
TAF1D-222	ENST00000546088	BRAF	P15056	766 aa		6.3	□□□□□ -1.4
TAF1D-222	ENST00000546088	PML	P29590	882 aa		6.3	□□□□□ -1.4
TAF1D-222	ENST00000546088	PDHA2	P29803	388 aa		6.3	□□□□□ -1.4
TAF1D-222	ENST00000546088	FMO4	P31512	558 aa		6.3	□□□□□ -1.4
TAF1D-222	ENST00000546088	MAGEA3	P43357	314 aa		6.3	□□□□□ -1.4
TAF1D-222	ENST00000546088	ARCN1	P48444	511 aa	Known RBP	6.3	□□□□□ -1.4
TAF1D-222	ENST00000546088	CLCNKA	P51800	687 aa		6.3	□□□□□ -1.4
TAF1D-222	ENST00000546088	OR1D5	P58170	312 aa		6.3	□□□□□ -1.4
TAF1D-222	ENST00000546088	CCL7	P80098	99 aa		6.3	□□□□□ -1.4
TAF1D-222	ENST00000546088	MPP1	Q00013	466 aa		6.3	□□□□□ -1.4
TAF1D-222	ENST00000546088	ACVR1	Q04771	509 aa		6.3	□□□□□ -1.4
TAF1D-222	ENST00000546088	CALCOCO2	Q13137	446 aa		6.3	□□□□□ -1.4
TAF1D-222	ENST00000546088	THOC5	Q13769	683 aa	Known RBP	6.3	□□□□□ -1.4
TAF1D-222	ENST00000546088	BOP1	Q14137	746 aa	Known RBP	6.3	□□□□□ -1.4
TAF1D-222	ENST00000546088	MORF4L2	Q15014	288 aa		6.3	□□□□□ -1.4
TAF1D-222	ENST00000546088	GPR33	Q49SQ1	333 aa		6.3	□□□□□ -1.4
TAF1D-222	ENST00000546088	C14orf28	Q4W4Y0	310 aa		6.3	□□□□□ -1.4
TAF1D-222	ENST00000546088	HSP90AA5P	Q58FG0	334 aa		6.3	□□□□□ -1.4
TAF1D-222	ENST00000546088	UBAP2	Q5T6F2	1119 aa	Known RBP	6.3	□□□□□ -1.4
TAF1D-222	ENST00000546088	DUPD1	Q68J44	220 aa		6.3	□□□□□ -1.4
TAF1D-222	ENST00000546088	ZNF470	Q6ECI4	717 aa		6.3	□□□□□ -1.4
TAF1D-222	ENST00000546088	TRMT10B	Q6PF06	316 aa	Known RBP	6.3	□□□□□ -1.4
TAF1D-222	ENST00000546088	USP53	Q70EK8	1073 aa		6.3	□□□□□ -1.4
TAF1D-222	ENST00000546088	NLRP9	Q7RTR0	991 aa		6.3	□□□□□ -1.4
TAF1D-222	ENST00000546088	ZNF572	Q7Z3I7	529 aa	Predicted RBP	6.3	□□□□□ -1.4
TAF1D-222	ENST00000546088	AMZ2	Q86W34	360 aa		6.3	□□□□□ -1.4
TAF1D-222	ENST00000546088	ZBED8	Q8IZ13	594 aa		6.3	□□□□□ -1.4
TAF1D-222	ENST00000546088	PDIK1L	Q8N165	341 aa		6.3	□□□□□ -1.4
TAF1D-222	ENST00000546088	ARL14	Q8N4G2	192 aa		6.3	□□□□□ -1.4
TAF1D-222	ENST00000546088	ARL10	Q8N8L6	244 aa		6.3	□□□□□ -1.4
TAF1D-222	ENST00000546088	FBXO36	Q8NEA4	188 aa		6.3	□□□□□ -1.4
TAF1D-222	ENST00000546088	GPR156	Q8NFN8	814 aa		6.3	□□□□□ -1.4
TAF1D-222	ENST00000546088	FBXO25	Q8TCJ0	367 aa		6.3	□□□□□ -1.4
TAF1D-222	ENST00000546088	MAPK15	Q8TD08	544 aa		6.3	□□□□□ -1.4
TAF1D-222	ENST00000546088	TBRG4	Q969Z0	631 aa	Known RBP eCLIP	6.3	□□□□□ -1.4
TAF1D-222	ENST00000546088	ULK4	Q96C45	1275 aa		6.3	□□□□□ -1.4
TAF1D-222	ENST00000546088	RNF31	Q96EP0	1072 aa		6.3	□□□□□ -1.4
TAF1D-222	ENST00000546088	ATXN7L3B	Q96GX2	97 aa		6.3	□□□□□ -1.4
TAF1D-222	ENST00000546088	FOXP3	Q9BZS1	431 aa		6.3	□□□□□ -1.4
TAF1D-222	ENST00000546088	WWP1	Q9H0M0	922 aa		6.3	□□□□□ -1.4
TAF1D-222	ENST00000546088	ABCG4	Q9H172	646 aa		6.3	□□□□□ -1.4
TAF1D-222	ENST00000546088	SAYSD1	Q9NPB0	183 aa		6.3	□□□□□ -1.4
TAF1D-222	ENST00000546088	SMOX	Q9NWM0	555 aa		6.3	□□□□□ -1.4
TAF1D-222	ENST00000546088	KLK13	Q9UKR3	277 aa		6.3	□□□□□ -1.4
TAF1D-222	ENST00000546088	FAM237B	A0A1B0GVD1	139 aa		6.3	□□□□□ -1.4
TAF1D-222	ENST00000546088	EME2	A4GXA9	379 aa	Predicted RBP	6.3	□□□□□ -1.4
TAF1D-222	ENST00000546088	RHPN2P1	A8MT19	583 aa		6.3	□□□□□ -1.4
TAF1D-222	ENST00000546088	AP3B1	O00203	1094 aa		6.3	□□□□□ -1.4
TAF1D-222	ENST00000546088	TPP1	O14773	563 aa		6.3	□□□□□ -1.4
TAF1D-222	ENST00000546088	NIPSNAP2	O75323	286 aa		6.3	□□□□□ -1.4
TAF1D-222	ENST00000546088	NDUFS3	O75489	264 aa		6.3	□□□□□ -1.4
TAF1D-222	ENST00000546088	BMP7	P18075	431 aa		6.3	□□□□□ -1.4
TAF1D-222	ENST00000546088	PAM	P19021	973 aa		6.3	□□□□□ -1.4
TAF1D-222	ENST00000546088	SSTR1	P30872	391 aa		6.3	□□□□□ -1.4
TAF1D-222	ENST00000546088	NTF4	P34130	210 aa		6.3	□□□□□ -1.4
TAF1D-222	ENST00000546088	SLC1A2	P43004	574 aa		6.3	□□□□□ -1.4
TAF1D-222	ENST00000546088	CARS	P49589	748 aa	Known RBP	6.3	□□□□□ -1.4
TAF1D-222	ENST00000546088	ARL4C	P56559	192 aa		6.3	□□□□□ -1.4
TAF1D-222	ENST00000546088	HHEX	Q03014	270 aa		6.3	□□□□□ -1.4
TAF1D-222	ENST00000546088	LAMB3	Q13751	1172 aa		6.3	□□□□□ -1.4
TAF1D-222	ENST00000546088	COL9A2	Q14055	689 aa	Predicted RBP	6.3	□□□□□ -1.4
TAF1D-222	ENST00000546088	HLTF	Q14527	1009 aa	Known RBP eCLIP	6.3	□□□□□ -1.4
TAF1D-222	ENST00000546088	CRYM	Q14894	314 aa		6.3	□□□□□ -1.4
TAF1D-222	ENST00000546088	SNAP47	Q5SQN1	464 aa		6.3	□□□□□ -1.4
TAF1D-222	ENST00000546088	HES3	Q5TGS1	186 aa		6.3	□□□□□ -1.4
TAF1D-222	ENST00000546088	PTRHD1	Q6GMV3	140 aa	Known RBP	6.3	□□□□□ -1.4
TAF1D-222	ENST00000546088	NEPRO	Q6NW34	567 aa		6.3	□□□□□ -1.4
TAF1D-222	ENST00000546088	ZDHHC24	Q6UX98	284 aa		6.3	□□□□□ -1.4
TAF1D-222	ENST00000546088	UNC5A	Q6ZN44	842 aa		6.3	□□□□□ -1.4
TAF1D-222	ENST00000546088	C22orf34	Q6ZV56	151 aa		6.3	□□□□□ -1.4
TAF1D-222	ENST00000546088	CENPU	Q71F23	418 aa		6.3	□□□□□ -1.4
TAF1D-222	ENST00000546088	TMEM135	Q86UB9	458 aa		6.3	□□□□□ -1.4
TAF1D-222	ENST00000546088	HOOK3	Q86VS8	718 aa		6.3	□□□□□ -1.4
TAF1D-222	ENST00000546088	KCNMB4	Q86W47	210 aa		6.3	□□□□□ -1.4
TAF1D-222	ENST00000546088	GSPT2	Q8IYD1	628 aa	Known RBP	6.3	□□□□□ -1.4
TAF1D-222	ENST00000546088	LMNTD1	Q8N9Z9	388 aa		6.3	□□□□□ -1.4
TAF1D-222	ENST00000546088	PHC3	Q8NDX5	983 aa		6.3	□□□□□ -1.4
TAF1D-222	ENST00000546088	GPR150	Q8NGU9	434 aa		6.3	□□□□□ -1.4
TAF1D-222	ENST00000546088	CFAP61	Q8NHU2	1237 aa		6.3	□□□□□ -1.4
TAF1D-222	ENST00000546088	ELMO1	Q92556	727 aa		6.3	□□□□□ -1.4
TAF1D-222	ENST00000546088	MRRF	Q96E11	262 aa	Known RBP	6.3	□□□□□ -1.4

Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms