RNA–Protein interactions for RNA: ENST00000545889.5

CLIP1-218, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 4,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-218ENST00000545889 TTC33Q6PID6 262 aaPredicted RBP8.45□□□□□ -1.06
CLIP1-218ENST00000545889 BRAT1Q6PJG6 821 aa8.45□□□□□ -1.06
CLIP1-218ENST00000545889 FAM220AQ7Z4H9 259 aa8.45□□□□□ -1.06
CLIP1-218ENST00000545889 SNX20Q7Z614 316 aa8.45□□□□□ -1.06
CLIP1-218ENST00000545889 ZBTB2Q8N680 514 aa8.45□□□□□ -1.06
CLIP1-218ENST00000545889 OR2AP1Q8NGE2 309 aa8.45□□□□□ -1.06
CLIP1-218ENST00000545889 RHBDD1Q8TEB9 315 aa8.45□□□□□ -1.06
CLIP1-218ENST00000545889 TMEM174Q8WUU8 243 aa8.45□□□□□ -1.06
CLIP1-218ENST00000545889 BORCS5Q969J3 196 aa8.45□□□□□ -1.06
CLIP1-218ENST00000545889 SLC25A23Q9BV35 468 aa8.45□□□□□ -1.06
CLIP1-218ENST00000545889 WDR6Q9NNW5 1121 aaKnown RBP8.45□□□□□ -1.06
CLIP1-218ENST00000545889 C19orf25Q9UFG5 118 aaPredicted RBP8.45□□□□□ -1.06
CLIP1-218ENST00000545889 GRXCR2A6NFK2 248 aa8.45□□□□□ -1.06
CLIP1-218ENST00000545889 C2orf71A6NGG8 1288 aa8.45□□□□□ -1.06
CLIP1-218ENST00000545889 M0QZQ0 153 aa8.45□□□□□ -1.06
CLIP1-218ENST00000545889 FCHO1O14526 889 aa8.45□□□□□ -1.06
CLIP1-218ENST00000545889 HMGB3O15347 200 aaKnown RBP8.45□□□□□ -1.06
CLIP1-218ENST00000545889 STX11O75558 287 aa8.45□□□□□ -1.06
CLIP1-218ENST00000545889 PDE9AO76083 593 aa8.45□□□□□ -1.06
CLIP1-218ENST00000545889 RECQL5O94762 991 aaPredicted RBP8.45□□□□□ -1.06
CLIP1-218ENST00000545889 ALPIP09923 528 aa8.45□□□□□ -1.06
CLIP1-218ENST00000545889 TSPAN8P19075 237 aa8.45□□□□□ -1.06
CLIP1-218ENST00000545889 CCNA2P20248 432 aa8.45□□□□□ -1.06
CLIP1-218ENST00000545889 CPN2P22792 545 aa8.45□□□□□ -1.06
CLIP1-218ENST00000545889 CXCL12P48061 93 aa8.45□□□□□ -1.06
CLIP1-218ENST00000545889 GDI2P50395 445 aaKnown RBP8.45□□□□□ -1.06
CLIP1-218ENST00000545889 SMIM11AP58511 58 aa8.45□□□□□ -1.06
CLIP1-218ENST00000545889 MRPL28Q13084 256 aaKnown RBP8.45□□□□□ -1.06
CLIP1-218ENST00000545889 FXNQ16595 210 aa8.45□□□□□ -1.06
CLIP1-218ENST00000545889 OTUD3Q5T2D3 398 aaPredicted RBP8.45□□□□□ -1.06
CLIP1-218ENST00000545889 LRRTM4Q86VH4 590 aa8.45□□□□□ -1.06
CLIP1-218ENST00000545889 EIF1ADQ8N9N8 165 aaKnown RBP8.45□□□□□ -1.06
CLIP1-218ENST00000545889 FAM3CQ92520 227 aa8.45□□□□□ -1.06
CLIP1-218ENST00000545889 APOLD1Q96LR9 279 aa8.45□□□□□ -1.06
CLIP1-218ENST00000545889 REEP1Q9H902 201 aa8.45□□□□□ -1.06
CLIP1-218ENST00000545889 THAP1Q9NVV9 213 aa8.45□□□□□ -1.06
CLIP1-218ENST00000545889 MTF2Q9Y483 593 aaPredicted RBP8.45□□□□□ -1.06
CLIP1-218ENST00000545889 PTPRFP10586 1907 aa8.45□□□□□ -1.06
CLIP1-218ENST00000545889 ICE1Q9Y2F5 2266 aa8.44□□□□□ -1.06
CLIP1-218ENST00000545889 A8MUA0 341 aa8.44□□□□□ -1.06
CLIP1-218ENST00000545889 K7EPI3 171 aa8.44□□□□□ -1.06
CLIP1-218ENST00000545889 B3GALT2O43825 422 aa8.44□□□□□ -1.06
CLIP1-218ENST00000545889 B4GALT3O60512 393 aa8.44□□□□□ -1.06
CLIP1-218ENST00000545889 MMP20O60882 483 aa8.44□□□□□ -1.06
CLIP1-218ENST00000545889 TMCC2O75069 709 aa8.44□□□□□ -1.06
CLIP1-218ENST00000545889 TRAPPC6AO75865 159 aa8.44□□□□□ -1.06
CLIP1-218ENST00000545889 OAZ2O95190 189 aa8.44□□□□□ -1.06
CLIP1-218ENST00000545889 KAT7O95251 611 aa8.44□□□□□ -1.06
CLIP1-218ENST00000545889 MYBPC1Q00872 1141 aa8.44□□□□□ -1.06
CLIP1-218ENST00000545889 RHAGQ02094 409 aa8.44□□□□□ -1.06
CLIP1-218ENST00000545889 PRRT3Q5FWE3 981 aa8.44□□□□□ -1.06
CLIP1-218ENST00000545889 RSBN1Q5VWQ0 802 aaPredicted RBP8.44□□□□□ -1.06
CLIP1-218ENST00000545889 C11orf88Q6PI97 169 aa8.44□□□□□ -1.06
CLIP1-218ENST00000545889 SLC9B2Q86UD5 537 aa8.44□□□□□ -1.06
CLIP1-218ENST00000545889 SERPINA9Q86WD7 417 aa8.44□□□□□ -1.06
CLIP1-218ENST00000545889 KBTBD2Q8IY47 623 aa8.44□□□□□ -1.06
CLIP1-218ENST00000545889 SAMD14Q8IZD0 417 aaPredicted RBP8.44□□□□□ -1.06
CLIP1-218ENST00000545889 ZNF786Q8N393 782 aa8.44□□□□□ -1.06
CLIP1-218ENST00000545889 CADM2Q8N3J6 435 aa8.44□□□□□ -1.06
CLIP1-218ENST00000545889 TSPAN14Q8NG11 270 aa8.44□□□□□ -1.06
CLIP1-218ENST00000545889 TAMM41Q96BW9 452 aa8.44□□□□□ -1.06
CLIP1-218ENST00000545889 MTERF3Q96E29 417 aa8.44□□□□□ -1.06
CLIP1-218ENST00000545889 CDCA3Q99618 268 aaPredicted RBP8.44□□□□□ -1.06
CLIP1-218ENST00000545889 SYT11Q9BT88 431 aa8.44□□□□□ -1.06
CLIP1-218ENST00000545889 LRRC19Q9H756 370 aa8.44□□□□□ -1.06
CLIP1-218ENST00000545889 MRPS30Q9NP92 439 aaKnown RBP8.44□□□□□ -1.06
CLIP1-218ENST00000545889 FBXW11Q9UKB1 542 aa8.44□□□□□ -1.06
CLIP1-218ENST00000545889 PACSIN3Q9UKS6 424 aa8.44□□□□□ -1.06
CLIP1-218ENST00000545889 RPL26L1Q9UNX3 145 aaKnown RBP8.44□□□□□ -1.06
CLIP1-218ENST00000545889 SH3PXD2BA1X283 911 aa8.44□□□□□ -1.06
CLIP1-218ENST00000545889 LEFTY2O00292 366 aa8.44□□□□□ -1.06
CLIP1-218ENST00000545889 XKRYO14609 159 aa8.44□□□□□ -1.06
CLIP1-218ENST00000545889 PAK4O96013 591 aaPredicted RBP8.44□□□□□ -1.06
CLIP1-218ENST00000545889 COL6A2P12110 1019 aa8.44□□□□□ -1.06
CLIP1-218ENST00000545889 FCGR1AP12314 374 aa8.44□□□□□ -1.06
CLIP1-218ENST00000545889 UGT1A1P22309 533 aa8.44□□□□□ -1.06
CLIP1-218ENST00000545889 CCNCP24863 283 aa8.44□□□□□ -1.06
CLIP1-218ENST00000545889 NSG1P42857 185 aa8.44□□□□□ -1.06
CLIP1-218ENST00000545889 MAPK12P53778 367 aa8.44□□□□□ -1.06
CLIP1-218ENST00000545889 ATP12AP54707 1039 aa8.44□□□□□ -1.06
CLIP1-218ENST00000545889 CDH13P55290 713 aa8.44□□□□□ -1.06
CLIP1-218ENST00000545889 CSNK2BP67870 215 aa8.44□□□□□ -1.06
CLIP1-218ENST00000545889 IL5RAQ01344 420 aa8.44□□□□□ -1.06
CLIP1-218ENST00000545889 PIWIL4Q7Z3Z4 852 aaKnown RBP8.44□□□□□ -1.06
CLIP1-218ENST00000545889 EID3Q8N140 333 aa8.44□□□□□ -1.06
CLIP1-218ENST00000545889 CENPSQ8N2Z9 138 aa8.44□□□□□ -1.06
CLIP1-218ENST00000545889 RASGEF1CQ8N431 466 aa8.44□□□□□ -1.06
CLIP1-218ENST00000545889 KYQ8NBH2 561 aa8.44□□□□□ -1.06
CLIP1-218ENST00000545889 PLA2G15Q8NCC3 412 aa8.44□□□□□ -1.06
CLIP1-218ENST00000545889 TCP10LQ8TDR4 215 aa8.44□□□□□ -1.06
CLIP1-218ENST00000545889 KCTD4Q8WVF5 259 aa8.44□□□□□ -1.06
CLIP1-218ENST00000545889 EXOSC8Q96B26 276 aaKnown RBP8.44□□□□□ -1.06
CLIP1-218ENST00000545889 RNF145Q96MT1 663 aa8.44□□□□□ -1.06
CLIP1-218ENST00000545889 TSSK3Q96PN8 268 aa8.44□□□□□ -1.06
CLIP1-218ENST00000545889 SPATA9Q9BWV2 254 aa8.44□□□□□ -1.06
CLIP1-218ENST00000545889 LMAN1LQ9HAT1 526 aa8.44□□□□□ -1.06
CLIP1-218ENST00000545889 TMEM27Q9HBJ8 222 aa8.44□□□□□ -1.06
CLIP1-218ENST00000545889 PPM1HQ9ULR3 514 aa8.44□□□□□ -1.06
CLIP1-218ENST00000545889 MFHAS1Q9Y4C4 1052 aa8.44□□□□□ -1.06
CLIP1-218ENST00000545889 SAC3D1A6NKF1 404 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms