RNA–Protein interactions for RNA: ENST00000545707.5

LDLR-204, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-204ENST00000545707 ZNF555Q8NEP9 628 aa15.47■□□□□ 0.07
LDLR-204ENST00000545707 CNIH3Q8TBE1 160 aa15.47■□□□□ 0.07
LDLR-204ENST00000545707 CCDC115Q96NT0 180 aa15.47■□□□□ 0.07
LDLR-204ENST00000545707 TTPALQ9BTX7 342 aa15.47■□□□□ 0.07
LDLR-204ENST00000545707 BEGAINQ9BUH8 593 aa15.47■□□□□ 0.07
LDLR-204ENST00000545707 FUNDC2Q9BWH2 189 aa15.47■□□□□ 0.07
LDLR-204ENST00000545707 ARMC7Q9H6L4 198 aa15.47■□□□□ 0.07
LDLR-204ENST00000545707 LRTM1Q9HBL6 345 aa15.47■□□□□ 0.07
LDLR-204ENST00000545707 CHCHD3Q9NX63 227 aaKnown RBP15.47■□□□□ 0.07
LDLR-204ENST00000545707 TMEM9Q9P0T7 183 aa15.47■□□□□ 0.07
LDLR-204ENST00000545707 TMEM88BA6NKF7 163 aa15.46■□□□□ 0.07
LDLR-204ENST00000545707 CREG1O75629 220 aa15.46■□□□□ 0.07
LDLR-204ENST00000545707 LRATO95237 230 aa15.46■□□□□ 0.07
LDLR-204ENST00000545707 GALTP07902 379 aa15.46■□□□□ 0.07
LDLR-204ENST00000545707 FCGRTP55899 365 aa15.46■□□□□ 0.07
LDLR-204ENST00000545707 IL1RL1Q01638 556 aa15.46■□□□□ 0.07
LDLR-204ENST00000545707 VAC14Q08AM6 782 aa15.46■□□□□ 0.07
LDLR-204ENST00000545707 SKIV2LQ15477 1246 aaKnown RBP15.46■□□□□ 0.07
LDLR-204ENST00000545707 GALNT10Q86SR1 603 aa15.46■□□□□ 0.07
LDLR-204ENST00000545707 PCSK9Q8NBP7 692 aaKnown RBP15.46■□□□□ 0.07
LDLR-204ENST00000545707 PIH1D2Q8WWB5 315 aa15.46■□□□□ 0.07
LDLR-204ENST00000545707 ULK4Q96C45 1275 aa15.46■□□□□ 0.07
LDLR-204ENST00000545707 FEM1AQ9BSK4 669 aa15.46■□□□□ 0.07
LDLR-204ENST00000545707 TMEM45AQ9NWC5 275 aa15.46■□□□□ 0.07
LDLR-204ENST00000545707 VNN3Q9NY84 501 aa15.46■□□□□ 0.07
LDLR-204ENST00000545707 VPS51Q9UID3 782 aa15.46■□□□□ 0.07
LDLR-204ENST00000545707 PSME2Q9UL46 239 aa15.46■□□□□ 0.07
LDLR-204ENST00000545707 OARD1Q9Y530 152 aa15.46■□□□□ 0.07
LDLR-204ENST00000545707 PCDHB1Q9Y5F3 818 aa15.46■□□□□ 0.07
LDLR-204ENST00000545707 LOC100130705A0A1B0GUX0 176 aa15.46■□□□□ 0.07
LDLR-204ENST00000545707 UPK3BL1B0FP48 263 aa15.46■□□□□ 0.07
LDLR-204ENST00000545707 UPK3BL2E5RIL1 263 aa15.46■□□□□ 0.07
LDLR-204ENST00000545707 K7EPI3 171 aa15.46■□□□□ 0.07
LDLR-204ENST00000545707 MANBAO00462 879 aa15.46■□□□□ 0.07
LDLR-204ENST00000545707 BCKDHAP12694 445 aa15.46■□□□□ 0.07
LDLR-204ENST00000545707 HMGA1P17096 107 aaKnown RBP15.46■□□□□ 0.07
LDLR-204ENST00000545707 GSTM2P28161 218 aa15.46■□□□□ 0.07
LDLR-204ENST00000545707 HTR1BP28222 390 aa15.46■□□□□ 0.07
LDLR-204ENST00000545707 DCTP40126 519 aa15.46■□□□□ 0.07
LDLR-204ENST00000545707 NKX3-2P78367 333 aa15.46■□□□□ 0.07
LDLR-204ENST00000545707 PLD1Q13393 1074 aa15.46■□□□□ 0.07
LDLR-204ENST00000545707 NFATC2Q13469 925 aa15.46■□□□□ 0.07
LDLR-204ENST00000545707 RBM48Q5RL73 367 aaKnown RBP15.46■□□□□ 0.07
LDLR-204ENST00000545707 ARMC12Q5T9G4 340 aa15.46■□□□□ 0.07
LDLR-204ENST00000545707 CACHD1Q5VU97 1274 aa15.46■□□□□ 0.07
LDLR-204ENST00000545707 DCDC5Q6ZRR9 648 aa15.46■□□□□ 0.07
LDLR-204ENST00000545707 BTLAQ7Z6A9 289 aa15.46■□□□□ 0.07
LDLR-204ENST00000545707 MICU2Q8IYU8 434 aa15.46■□□□□ 0.07
LDLR-204ENST00000545707 HDAC2Q92769 488 aaKnown RBP15.46■□□□□ 0.07
LDLR-204ENST00000545707 TSSK3Q96PN8 268 aa15.46■□□□□ 0.07
LDLR-204ENST00000545707 SLC22A12Q96S37 553 aa15.46■□□□□ 0.07
LDLR-204ENST00000545707 KAT8Q9H7Z6 458 aaKnown RBP15.46■□□□□ 0.07
LDLR-204ENST00000545707 ZFYVE1Q9HBF4 777 aa15.46■□□□□ 0.07
LDLR-204ENST00000545707 IFRD1O00458 451 aaPredicted RBP15.45■□□□□ 0.06
LDLR-204ENST00000545707 FUCA1P04066 466 aa15.45■□□□□ 0.06
LDLR-204ENST00000545707 CYP4B1P13584 511 aa15.45■□□□□ 0.06
LDLR-204ENST00000545707 TACR1P25103 407 aa15.45■□□□□ 0.06
LDLR-204ENST00000545707 CSKP41240 450 aa15.45■□□□□ 0.06
LDLR-204ENST00000545707 CDKN2CP42773 168 aa15.45■□□□□ 0.06
LDLR-204ENST00000545707 RGS4P49798 205 aa15.45■□□□□ 0.06
LDLR-204ENST00000545707 ITGADQ13349 1161 aa15.45■□□□□ 0.06
LDLR-204ENST00000545707 NR1D2Q14995 579 aa15.45■□□□□ 0.06
LDLR-204ENST00000545707 CHRNA6Q15825 494 aa15.45■□□□□ 0.06
LDLR-204ENST00000545707 CENPSQ8N2Z9 138 aa15.45■□□□□ 0.06
LDLR-204ENST00000545707 NRBF2Q96F24 287 aa15.45■□□□□ 0.06
LDLR-204ENST00000545707 MYO19Q96H55 970 aa15.45■□□□□ 0.06
LDLR-204ENST00000545707 EGLN2Q96KS0 407 aa15.45■□□□□ 0.06
LDLR-204ENST00000545707 CLMPQ9H6B4 373 aa15.45■□□□□ 0.06
LDLR-204ENST00000545707 DCAF13Q9NV06 445 aaKnown RBP15.45■□□□□ 0.06
LDLR-204ENST00000545707 TOR1BO14657 336 aa15.45■□□□□ 0.06
LDLR-204ENST00000545707 BCAS1O75363 584 aaPredicted RBP15.45■□□□□ 0.06
LDLR-204ENST00000545707 DIRAS1O95057 198 aa15.45■□□□□ 0.06
LDLR-204ENST00000545707 PARNO95453 639 aaKnown RBP15.45■□□□□ 0.06
LDLR-204ENST00000545707 HPRP00739 348 aa15.45■□□□□ 0.06
LDLR-204ENST00000545707 OCM2P0CE71 109 aa15.45■□□□□ 0.06
LDLR-204ENST00000545707 OCMP0CE72 109 aaPredicted RBP15.45■□□□□ 0.06
LDLR-204ENST00000545707 ISL1P61371 349 aa15.45■□□□□ 0.06
LDLR-204ENST00000545707 SLC14A1Q13336 389 aa15.45■□□□□ 0.06
LDLR-204ENST00000545707 TCTN1Q2MV58 587 aa15.45■□□□□ 0.06
LDLR-204ENST00000545707 PGS1Q32NB8 556 aa15.45■□□□□ 0.06
LDLR-204ENST00000545707 CES5AQ6NT32 575 aa15.45■□□□□ 0.06
LDLR-204ENST00000545707 RGMBQ6NW40 437 aa15.45■□□□□ 0.06
LDLR-204ENST00000545707 CRTC3Q6UUV7 619 aa15.45■□□□□ 0.06
LDLR-204ENST00000545707 ANKS3Q6ZW76 656 aa15.45■□□□□ 0.06
LDLR-204ENST00000545707 CHST9Q7L1S5 443 aa15.45■□□□□ 0.06
LDLR-204ENST00000545707 TSPAN33Q86UF1 283 aa15.45■□□□□ 0.06
LDLR-204ENST00000545707 APCDD1Q8J025 514 aa15.45■□□□□ 0.06
LDLR-204ENST00000545707 RNF175Q8N4F7 328 aa15.45■□□□□ 0.06
LDLR-204ENST00000545707 ZBTB2Q8N680 514 aa15.45■□□□□ 0.06
LDLR-204ENST00000545707 RAB2BQ8WUD1 216 aa15.45■□□□□ 0.06
LDLR-204ENST00000545707 UPF1Q92900 1129 aaKnown RBP eCLIP15.45■□□□□ 0.069e-11■■■■■ 42
LDLR-204ENST00000545707 FKBP10Q96AY3 582 aa15.45■□□□□ 0.06
LDLR-204ENST00000545707 FAM120BQ96EK7 910 aaKnown RBP15.45■□□□□ 0.06
LDLR-204ENST00000545707 COX4I2Q96KJ9 171 aa15.45■□□□□ 0.06
LDLR-204ENST00000545707 RBM4BQ9BQ04 359 aaKnown RBP15.45■□□□□ 0.06
LDLR-204ENST00000545707 RBM4Q9BWF3 364 aaKnown RBP15.45■□□□□ 0.06
LDLR-204ENST00000545707 ACPTQ9BZG2 426 aa15.45■□□□□ 0.06
LDLR-204ENST00000545707 MAGEE1Q9HCI5 957 aa15.45■□□□□ 0.06
LDLR-204ENST00000545707 TMEFF2Q9UIK5 374 aaPredicted RBP15.45■□□□□ 0.06
LDLR-204ENST00000545707 GNPTGQ9UJJ9 305 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms