RNA–Protein interactions for RNA: ENST00000545608.5

USP28-215, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 733 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-215ENST00000545608 CD151P48509 253 aa8.2□□□□□ -1.1
USP28-215ENST00000545608 ITGA1P56199 1179 aa8.2□□□□□ -1.1
USP28-215ENST00000545608 GSDMDP57764 484 aa8.2□□□□□ -1.1
USP28-215ENST00000545608 CBLBQ13191 982 aa8.2□□□□□ -1.1
USP28-215ENST00000545608 BOP1Q14137 746 aaKnown RBP8.2□□□□□ -1.1
USP28-215ENST00000545608 DBN1Q16643 649 aa8.2□□□□□ -1.1
USP28-215ENST00000545608 PARP6Q2NL67 630 aa8.2□□□□□ -1.1
USP28-215ENST00000545608 PTCHD3Q3KNS1 767 aa8.2□□□□□ -1.1
USP28-215ENST00000545608 FAM198BQ6UWH4 519 aa8.2□□□□□ -1.1
USP28-215ENST00000545608 RAD9BQ6WBX8 426 aa8.2□□□□□ -1.1
USP28-215ENST00000545608 TAS2R42Q7RTR8 314 aa8.2□□□□□ -1.1
USP28-215ENST00000545608 ATCAYQ86WG3 371 aa8.2□□□□□ -1.1
USP28-215ENST00000545608 PIANPQ8IYJ0 282 aa8.2□□□□□ -1.1
USP28-215ENST00000545608 ADGRF3Q8IZF5 1079 aa8.2□□□□□ -1.1
USP28-215ENST00000545608 ZBTB2Q8N680 514 aa8.2□□□□□ -1.1
USP28-215ENST00000545608 CLDN19Q8N6F1 224 aa8.2□□□□□ -1.1
USP28-215ENST00000545608 TFGQ92734 400 aaPredicted RBP8.2□□□□□ -1.1
USP28-215ENST00000545608 CDKN2AIPNLQ96HQ2 116 aa8.2□□□□□ -1.1
USP28-215ENST00000545608 PSMG3-AS1Q96PY0 264 aa8.2□□□□□ -1.1
USP28-215ENST00000545608 HGH1Q9BTY7 390 aa8.2□□□□□ -1.1
USP28-215ENST00000545608 NLNQ9BYT8 704 aa8.2□□□□□ -1.1
USP28-215ENST00000545608 PITPNM3Q9BZ71 974 aa8.2□□□□□ -1.1
USP28-215ENST00000545608 TFB2MQ9H5Q4 396 aaKnown RBP8.2□□□□□ -1.1
USP28-215ENST00000545608 MVB12BQ9H7P6 319 aa8.2□□□□□ -1.1
USP28-215ENST00000545608 ACTR5Q9H9F9 607 aaPredicted RBP8.2□□□□□ -1.1
USP28-215ENST00000545608 FANCEQ9HB96 536 aa8.2□□□□□ -1.1
USP28-215ENST00000545608 SYTL2Q9HCH5 934 aa8.2□□□□□ -1.1
USP28-215ENST00000545608 FAM60AQ9NP50 221 aa8.2□□□□□ -1.1
USP28-215ENST00000545608 LUC7LQ9NQ29 371 aaKnown RBP8.2□□□□□ -1.1
USP28-215ENST00000545608 NLE1Q9NVX2 485 aaPredicted RBP8.2□□□□□ -1.1
USP28-215ENST00000545608 PIH1D1Q9NWS0 290 aaKnown RBP8.2□□□□□ -1.1
USP28-215ENST00000545608 ACTR10Q9NZ32 417 aa8.2□□□□□ -1.1
USP28-215ENST00000545608 FEZ2Q9UHY8 353 aaPredicted RBP8.2□□□□□ -1.1
USP28-215ENST00000545608 TCFL5Q9UL49 500 aa8.2□□□□□ -1.1
USP28-215ENST00000545608 SNX7Q9UNH6 387 aa8.2□□□□□ -1.1
USP28-215ENST00000545608 ZNF232Q9UNY5 417 aa8.2□□□□□ -1.1
USP28-215ENST00000545608 PCDHGA9Q9Y5G4 932 aaKnown RBP8.2□□□□□ -1.1
USP28-215ENST00000545608 MAST4O15021 2626 aa8.2□□□□□ -1.1
USP28-215ENST00000545608 UBR5O95071 2799 aaPredicted RBP8.2□□□□□ -1.1
USP28-215ENST00000545608 BOD1L1Q8NFC6 3051 aa8.19□□□□□ -1.1
USP28-215ENST00000545608 CCDC78A2IDD5 438 aa8.19□□□□□ -1.1
USP28-215ENST00000545608 BLACEA4D250 179 aa8.19□□□□□ -1.1
USP28-215ENST00000545608 BTNL10A8MVZ5 291 aa8.19□□□□□ -1.1
USP28-215ENST00000545608 ZNF185O15231 689 aa8.19□□□□□ -1.1
USP28-215ENST00000545608 ZNF749O43361 778 aa8.19□□□□□ -1.1
USP28-215ENST00000545608 HCRTR1O43613 425 aa8.19□□□□□ -1.1
USP28-215ENST00000545608 CEACAM4O75871 244 aa8.19□□□□□ -1.1
USP28-215ENST00000545608 TMEM63AO94886 807 aa8.19□□□□□ -1.1
USP28-215ENST00000545608 MSL3P1P0C860 447 aa8.19□□□□□ -1.1
USP28-215ENST00000545608 TPBGLP0DKB5 382 aa8.19□□□□□ -1.1
USP28-215ENST00000545608 SPTBP11277 2137 aa8.19□□□□□ -1.1
USP28-215ENST00000545608 GP1BBP13224 206 aa8.19□□□□□ -1.1
USP28-215ENST00000545608 GNLYP22749 145 aa8.19□□□□□ -1.1
USP28-215ENST00000545608 CETN2P41208 172 aa8.19□□□□□ -1.1
USP28-215ENST00000545608 EIF1AXP47813 144 aaKnown RBP8.19□□□□□ -1.1
USP28-215ENST00000545608 PGDP52209 483 aa8.19□□□□□ -1.1
USP28-215ENST00000545608 CACNG1Q06432 222 aa8.19□□□□□ -1.1
USP28-215ENST00000545608 RPA4Q13156 261 aa8.19□□□□□ -1.1
USP28-215ENST00000545608 POU6F1Q14863 301 aa8.19□□□□□ -1.1
USP28-215ENST00000545608 PAPD7Q5XG87 772 aaKnown RBP8.19□□□□□ -1.1
USP28-215ENST00000545608 ZNF385CQ66K41 422 aaPredicted RBP8.19□□□□□ -1.1
USP28-215ENST00000545608 NAPRTQ6XQN6 538 aa8.19□□□□□ -1.1
USP28-215ENST00000545608 ARHGEF18Q6ZSZ5 1173 aa8.19□□□□□ -1.1
USP28-215ENST00000545608 CDHR3Q6ZTQ4 885 aa8.19□□□□□ -1.1
USP28-215ENST00000545608 TRIM73Q86UV7 250 aa8.19□□□□□ -1.1
USP28-215ENST00000545608 AMIGO1Q86WK6 493 aa8.19□□□□□ -1.1
USP28-215ENST00000545608 TMTC1Q8IUR5 882 aa8.19□□□□□ -1.1
USP28-215ENST00000545608 SYTL1Q8IYJ3 562 aa8.19□□□□□ -1.1
USP28-215ENST00000545608 TAB3Q8N5C8 712 aaPredicted RBP8.19□□□□□ -1.1
USP28-215ENST00000545608 LRRC57Q8N9N7 239 aa8.19□□□□□ -1.1
USP28-215ENST00000545608 FAM71DQ8N9W8 422 aa8.19□□□□□ -1.1
USP28-215ENST00000545608 ACRBPQ8NEB7 543 aa8.19□□□□□ -1.1
USP28-215ENST00000545608 FDCSPQ8NFU4 85 aa8.19□□□□□ -1.1
USP28-215ENST00000545608 CPT1CQ8TCG5 803 aa8.19□□□□□ -1.1
USP28-215ENST00000545608 STYXQ8WUJ0 223 aa8.19□□□□□ -1.1
USP28-215ENST00000545608 PPP1R2P1Q96PQ5 205 aa8.19□□□□□ -1.1
USP28-215ENST00000545608 PANX2Q96RD6 677 aa8.19□□□□□ -1.1
USP28-215ENST00000545608 SMARCAL1Q9NZC9 954 aa8.19□□□□□ -1.1
USP28-215ENST00000545608 SERTAD3Q9UJW9 196 aa8.19□□□□□ -1.1
USP28-215ENST00000545608 ICKQ9UPZ9 632 aa8.19□□□□□ -1.1
USP28-215ENST00000545608 HRH3Q9Y5N1 445 aa8.19□□□□□ -1.1
USP28-215ENST00000545608 MED13Q9UHV7 2174 aa8.18□□□□□ -1.1
USP28-215ENST00000545608 A0A0U1RQJ8 604 aa8.18□□□□□ -1.1
USP28-215ENST00000545608 TCRBV7S2A1N4TA0A589 114 aa8.18□□□□□ -1.1
USP28-215ENST00000545608 OR51F1A6NGY5 319 aa8.18□□□□□ -1.1
USP28-215ENST00000545608 A6NL46 340 aa8.18□□□□□ -1.1
USP28-215ENST00000545608 C2orf74A8MZ97 194 aa8.18□□□□□ -1.1
USP28-215ENST00000545608 E7EQ34 232 aa8.18□□□□□ -1.1
USP28-215ENST00000545608 H3BMH7 237 aa8.18□□□□□ -1.1
USP28-215ENST00000545608 VPS4BO75351 444 aa8.18□□□□□ -1.1
USP28-215ENST00000545608 SORBS2O94875 1100 aaKnown RBP8.18□□□□□ -1.1
USP28-215ENST00000545608 AP2A2O94973 939 aa8.18□□□□□ -1.1
USP28-215ENST00000545608 CTSBP07858 339 aa8.18□□□□□ -1.1
USP28-215ENST00000545608 CBSLP0DN79 551 aa8.18□□□□□ -1.1
USP28-215ENST00000545608 CYP2A7P20853 494 aa8.18□□□□□ -1.1
USP28-215ENST00000545608 PSMA3P25788 255 aa8.18□□□□□ -1.1
USP28-215ENST00000545608 ACADLP28330 430 aa8.18□□□□□ -1.1
USP28-215ENST00000545608 FOXN2P32314 431 aa8.18□□□□□ -1.1
USP28-215ENST00000545608 CBSP35520 551 aa8.18□□□□□ -1.1
USP28-215ENST00000545608 GABRA4P48169 554 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms