RNA–Protein interactions for RNA: ENST00000545440.5

SNHG1-223, Transcript of small nucleolar RNA host gene 1, human

TSL 2 BASIC

Gene SNHG1, Length 754 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG1-223	ENST00000545440	TAAR9	Q96RI9	348 aa		7.52	□□□□□ -1.21
SNHG1-223	ENST00000545440	TMEM121	Q9BTD3	319 aa		7.52	□□□□□ -1.21
SNHG1-223	ENST00000545440	ASB8	Q9H765	288 aa		7.52	□□□□□ -1.21
SNHG1-223	ENST00000545440	CPNE5	Q9HCH3	593 aa		7.52	□□□□□ -1.21
SNHG1-223	ENST00000545440	FOXJ2	Q9P0K8	574 aa		7.52	□□□□□ -1.21
SNHG1-223	ENST00000545440	TMEM9	Q9P0T7	183 aa		7.52	□□□□□ -1.21
SNHG1-223	ENST00000545440	ZNF624	Q9P2J8	865 aa	Predicted RBP	7.52	□□□□□ -1.21
SNHG1-223	ENST00000545440	GUCA1B	Q9UMX6	200 aa		7.52	□□□□□ -1.21
SNHG1-223	ENST00000545440	R3HDM2	Q9Y2K5	976 aa	Known RBP	7.52	□□□□□ -1.21
SNHG1-223	ENST00000545440	FASN	P49327	2511 aa	Known RBP	7.52	□□□□□ -1.21
SNHG1-223	ENST00000545440	ATM	Q13315	3056 aa		7.52	□□□□□ -1.21
SNHG1-223	ENST00000545440	CCDC88C	Q9P219	2028 aa		7.51	□□□□□ -1.21
SNHG1-223	ENST00000545440	TRBV23OR9-2	A0A075B6M9	112 aa		7.51	□□□□□ -1.21
SNHG1-223	ENST00000545440	OR2AG2	A6NM03	316 aa		7.51	□□□□□ -1.21
SNHG1-223	ENST00000545440	OR52A4P	A6NMU1	304 aa		7.51	□□□□□ -1.21
SNHG1-223	ENST00000545440		B2RBV5	119 aa		7.51	□□□□□ -1.21
SNHG1-223	ENST00000545440	STMND1	H3BQB6	276 aa		7.51	□□□□□ -1.21
SNHG1-223	ENST00000545440		K7ENP7	123 aa		7.51	□□□□□ -1.21
SNHG1-223	ENST00000545440	TOX3	O15405	576 aa	Predicted RBP	7.51	□□□□□ -1.21
SNHG1-223	ENST00000545440	PSMD3	O43242	534 aa		7.51	□□□□□ -1.21
SNHG1-223	ENST00000545440	LDB2	O43679	373 aa		7.51	□□□□□ -1.21
SNHG1-223	ENST00000545440	LIAS	O43766	372 aa		7.51	□□□□□ -1.21
SNHG1-223	ENST00000545440	UGT1A9	O60656	530 aa		7.51	□□□□□ -1.21
SNHG1-223	ENST00000545440	UBXN7	O94888	489 aa		7.51	□□□□□ -1.21
SNHG1-223	ENST00000545440	METTL18	O95568	372 aa		7.51	□□□□□ -1.21
SNHG1-223	ENST00000545440	C9	P02748	559 aa		7.51	□□□□□ -1.21
SNHG1-223	ENST00000545440	RALB	P11234	206 aa		7.51	□□□□□ -1.21
SNHG1-223	ENST00000545440	FGF3	P11487	239 aa	Predicted RBP	7.51	□□□□□ -1.21
SNHG1-223	ENST00000545440	CCL4	P13236	92 aa		7.51	□□□□□ -1.21
SNHG1-223	ENST00000545440	UGT1A6	P19224	532 aa		7.51	□□□□□ -1.21
SNHG1-223	ENST00000545440	MSH3	P20585	1137 aa		7.51	□□□□□ -1.21
SNHG1-223	ENST00000545440	CD247	P20963	164 aa		7.51	□□□□□ -1.21
SNHG1-223	ENST00000545440	UGT1A1	P22309	533 aa		7.51	□□□□□ -1.21
SNHG1-223	ENST00000545440	UGT1A4	P22310	534 aa		7.51	□□□□□ -1.21
SNHG1-223	ENST00000545440	RPL10	P27635	214 aa	Known RBP	7.51	□□□□□ -1.21
SNHG1-223	ENST00000545440	STIP1	P31948	543 aa	Known RBP	7.51	□□□□□ -1.21
SNHG1-223	ENST00000545440	CA5A	P35218	305 aa		7.51	□□□□□ -1.21
SNHG1-223	ENST00000545440	ADM	P35318	185 aa		7.51	□□□□□ -1.21
SNHG1-223	ENST00000545440	UGT1A3	P35503	534 aa		7.51	□□□□□ -1.21
SNHG1-223	ENST00000545440	HAL	P42357	657 aa		7.51	□□□□□ -1.21
SNHG1-223	ENST00000545440	MAPK9	P45984	424 aa		7.51	□□□□□ -1.21
SNHG1-223	ENST00000545440	PPM1F	P49593	454 aa	Predicted RBP	7.51	□□□□□ -1.21
SNHG1-223	ENST00000545440	PRLHR	P49683	370 aa		7.51	□□□□□ -1.21
SNHG1-223	ENST00000545440	DRG2	P55039	364 aa	Known RBP	7.51	□□□□□ -1.21
SNHG1-223	ENST00000545440	XIAP	P98170	497 aa		7.51	□□□□□ -1.21
SNHG1-223	ENST00000545440	SPARCL1	Q14515	664 aa		7.51	□□□□□ -1.21
SNHG1-223	ENST00000545440	PTPRCAP	Q14761	206 aa		7.51	□□□□□ -1.21
SNHG1-223	ENST00000545440	OASL	Q15646	514 aa	Known RBP	7.51	□□□□□ -1.21
SNHG1-223	ENST00000545440	ZC3H12B	Q5HYM0	836 aa	Known RBP	7.51	□□□□□ -1.21
SNHG1-223	ENST00000545440	FNBP1L	Q5T0N5	605 aa		7.51	□□□□□ -1.21
SNHG1-223	ENST00000545440	INO80C	Q6PI98	192 aa	Predicted RBP	7.51	□□□□□ -1.21
SNHG1-223	ENST00000545440	C22orf34	Q6ZV56	151 aa		7.51	□□□□□ -1.21
SNHG1-223	ENST00000545440	ARHGAP22	Q7Z5H3	698 aa		7.51	□□□□□ -1.21
SNHG1-223	ENST00000545440	SNX20	Q7Z614	316 aa		7.51	□□□□□ -1.21
SNHG1-223	ENST00000545440	LINC00523	Q86TU6	105 aa		7.51	□□□□□ -1.21
SNHG1-223	ENST00000545440	FAM129C	Q86XR2	697 aa		7.51	□□□□□ -1.21
SNHG1-223	ENST00000545440	DTX1	Q86Y01	620 aa		7.51	□□□□□ -1.21
SNHG1-223	ENST00000545440	SLC13A5	Q86YT5	568 aa	Predicted RBP	7.51	□□□□□ -1.21
SNHG1-223	ENST00000545440	PLXDC1	Q8IUK5	500 aa		7.51	□□□□□ -1.21
SNHG1-223	ENST00000545440	NXPE1	Q8N323	547 aa		7.51	□□□□□ -1.21
SNHG1-223	ENST00000545440	BMPER	Q8N8U9	685 aa		7.51	□□□□□ -1.21
SNHG1-223	ENST00000545440	OR13C4	Q8NGS5	318 aa		7.51	□□□□□ -1.21
SNHG1-223	ENST00000545440	HEXDC	Q8WVB3	486 aa		7.51	□□□□□ -1.21
SNHG1-223	ENST00000545440	ATG4A	Q8WYN0	398 aa		7.51	□□□□□ -1.21
SNHG1-223	ENST00000545440	CXorf40B	Q96DE9	158 aa		7.51	□□□□□ -1.21
SNHG1-223	ENST00000545440	SGSM3	Q96HU1	749 aa		7.51	□□□□□ -1.21
SNHG1-223	ENST00000545440	LINC00615	Q96LM1	132 aa	Predicted RBP	7.51	□□□□□ -1.21
SNHG1-223	ENST00000545440	BBC3	Q96PG8	261 aa	Predicted RBP	7.51	□□□□□ -1.21
SNHG1-223	ENST00000545440	TEFM	Q96QE5	360 aa	Known RBP	7.51	□□□□□ -1.21
SNHG1-223	ENST00000545440	CCNL2	Q96S94	520 aa	Predicted RBP	7.51	□□□□□ -1.21
SNHG1-223	ENST00000545440	TBC1D10A	Q9BXI6	508 aa		7.51	□□□□□ -1.21
SNHG1-223	ENST00000545440	ASPSCR1	Q9BZE9	553 aa		7.51	□□□□□ -1.21
SNHG1-223	ENST00000545440	RAB33B	Q9H082	229 aa		7.51	□□□□□ -1.21
SNHG1-223	ENST00000545440	UGT1A7	Q9HAW7	530 aa		7.51	□□□□□ -1.21
SNHG1-223	ENST00000545440	UGT1A10	Q9HAW8	530 aa		7.51	□□□□□ -1.21
SNHG1-223	ENST00000545440	UGT1A8	Q9HAW9	530 aa		7.51	□□□□□ -1.21
SNHG1-223	ENST00000545440	SLC40A1	Q9NP59	571 aa		7.51	□□□□□ -1.21
SNHG1-223	ENST00000545440	OGFR	Q9NZT2	677 aa		7.51	□□□□□ -1.21
SNHG1-223	ENST00000545440	CRLS1	Q9UJA2	301 aa		7.51	□□□□□ -1.21
SNHG1-223	ENST00000545440	SEC16A	O15027	2179 aa		7.51	□□□□□ -1.21
SNHG1-223	ENST00000545440	ANKRD12	Q6UB98	2062 aa		7.51	□□□□□ -1.21
SNHG1-223	ENST00000545440	HEATR5B	Q9P2D3	2071 aa		7.51	□□□□□ -1.21
SNHG1-223	ENST00000545440	IGLV3-16	A0A075B6K0	115 aa		7.5	□□□□□ -1.21
SNHG1-223	ENST00000545440	TRBV5-4	A0A0C4DH59	114 aa		7.5	□□□□□ -1.21
SNHG1-223	ENST00000545440	MGAT4D	A6NG13	374 aa		7.5	□□□□□ -1.21
SNHG1-223	ENST00000545440	EFCAB7	A8K855	629 aa		7.5	□□□□□ -1.21
SNHG1-223	ENST00000545440	NRDC	O43847	1150 aa		7.5	□□□□□ -1.21
SNHG1-223	ENST00000545440	POP7	O75817	140 aa	Known RBP	7.5	□□□□□ -1.21
SNHG1-223	ENST00000545440	SUN1	O94901	812 aa		7.5	□□□□□ -1.21
SNHG1-223	ENST00000545440	F13B	P05160	661 aa		7.5	□□□□□ -1.21
SNHG1-223	ENST00000545440	MTHFD1	P11586	935 aa	Known RBP	7.5	□□□□□ -1.21
SNHG1-223	ENST00000545440	PSMA3	P25788	255 aa		7.5	□□□□□ -1.21
SNHG1-223	ENST00000545440	MC4R	P32245	332 aa		7.5	□□□□□ -1.21
SNHG1-223	ENST00000545440	FDFT1	P37268	417 aa		7.5	□□□□□ -1.21
SNHG1-223	ENST00000545440	GFER	P55789	205 aa		7.5	□□□□□ -1.21
SNHG1-223	ENST00000545440	CCZ1B	P86790	482 aa		7.5	□□□□□ -1.21
SNHG1-223	ENST00000545440	CCZ1	P86791	482 aa	Predicted RBP	7.5	□□□□□ -1.21
SNHG1-223	ENST00000545440	GPR18	Q14330	331 aa		7.5	□□□□□ -1.21
SNHG1-223	ENST00000545440	NFE2L1	Q14494	772 aa		7.5	□□□□□ -1.21
SNHG1-223	ENST00000545440	CLCA4	Q14CN2	919 aa		7.5	□□□□□ -1.21

Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms