RNA–Protein interactions for RNA: ENST00000545305.1

SCARB1-209, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 851 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-209ENST00000545305 ZFC3H1O60293 1989 aaKnown RBP13.42□□□□□ -0.26
SCARB1-209ENST00000545305 PRR19A6NJB7 356 aa13.42□□□□□ -0.26
SCARB1-209ENST00000545305 K7EPI3 171 aa13.42□□□□□ -0.26
SCARB1-209ENST00000545305 MYO1CO00159 1063 aa13.42□□□□□ -0.26
SCARB1-209ENST00000545305 TLR4O00206 839 aa13.42□□□□□ -0.26
SCARB1-209ENST00000545305 BCAT2O15382 392 aaPredicted RBP13.42□□□□□ -0.26
SCARB1-209ENST00000545305 SNX3O60493 162 aa13.42□□□□□ -0.26
SCARB1-209ENST00000545305 STK16O75716 305 aa13.42□□□□□ -0.26
SCARB1-209ENST00000545305 KITP10721 976 aa13.42□□□□□ -0.26
SCARB1-209ENST00000545305 CTSEP14091 401 aa13.42□□□□□ -0.26
SCARB1-209ENST00000545305 ARRB2P32121 409 aa13.42□□□□□ -0.26
SCARB1-209ENST00000545305 CCR10P46092 362 aa13.42□□□□□ -0.26
SCARB1-209ENST00000545305 DHPSP49366 369 aaPredicted RBP13.42□□□□□ -0.26
SCARB1-209ENST00000545305 EIF2B5Q13144 721 aaKnown RBP13.42□□□□□ -0.26
SCARB1-209ENST00000545305 C18orf21Q32NC0 220 aaPredicted RBP13.42□□□□□ -0.26
SCARB1-209ENST00000545305 UAP1L1Q3KQV9 507 aa13.42□□□□□ -0.26
SCARB1-209ENST00000545305 CAPRIN2Q6IMN6 1127 aaKnown RBP13.42□□□□□ -0.26
SCARB1-209ENST00000545305 CGB2Q6NT52 195 aa13.42□□□□□ -0.26
SCARB1-209ENST00000545305 SLC30A9Q6PML9 568 aa13.42□□□□□ -0.26
SCARB1-209ENST00000545305 RPS27LQ71UM5 84 aaKnown RBP13.42□□□□□ -0.26
SCARB1-209ENST00000545305 CUZD1Q86UP6 607 aa13.42□□□□□ -0.26
SCARB1-209ENST00000545305 TBC1D21Q8IYX1 336 aa13.42□□□□□ -0.26
SCARB1-209ENST00000545305 CACNA2D3Q8IZS8 1091 aa13.42□□□□□ -0.26
SCARB1-209ENST00000545305 LSMEM2Q8N112 164 aa13.42□□□□□ -0.26
SCARB1-209ENST00000545305 RAB42Q8N4Z0 105 aa13.42□□□□□ -0.26
SCARB1-209ENST00000545305 TEX9Q8N6V9 391 aa13.42□□□□□ -0.26
SCARB1-209ENST00000545305 ANKS4BQ8N8V4 417 aa13.42□□□□□ -0.26
SCARB1-209ENST00000545305 CCDC197Q8NCU1 140 aa13.42□□□□□ -0.26
SCARB1-209ENST00000545305 SPDYE1Q8NFV5 336 aaPredicted RBP13.42□□□□□ -0.26
SCARB1-209ENST00000545305 OR9A1PQ8NGU1 263 aa13.42□□□□□ -0.26
SCARB1-209ENST00000545305 TRPC4APQ8TEL6 797 aa13.42□□□□□ -0.26
SCARB1-209ENST00000545305 RAD51AP1Q96B01 352 aa13.42□□□□□ -0.26
SCARB1-209ENST00000545305 MOCOSQ96EN8 888 aa13.42□□□□□ -0.26
SCARB1-209ENST00000545305 THOC1Q96FV9 657 aaKnown RBP13.42□□□□□ -0.26
SCARB1-209ENST00000545305 PKP4Q99569 1192 aa13.42□□□□□ -0.26
SCARB1-209ENST00000545305 HGH1Q9BTY7 390 aa13.42□□□□□ -0.26
SCARB1-209ENST00000545305 SHCBP1LQ9BZQ2 653 aa13.42□□□□□ -0.26
SCARB1-209ENST00000545305 CD244Q9BZW8 370 aa13.42□□□□□ -0.26
SCARB1-209ENST00000545305 SEMA4BQ9NPR2 832 aaPredicted RBP13.42□□□□□ -0.26
SCARB1-209ENST00000545305 IMP3Q9NV31 184 aaKnown RBP13.42□□□□□ -0.26
SCARB1-209ENST00000545305 SLCO1B1Q9Y6L6 691 aa13.42□□□□□ -0.26
SCARB1-209ENST00000545305 ANKRD12Q6UB98 2062 aa13.41□□□□□ -0.26
SCARB1-209ENST00000545305 ZNF839A8K0R7 811 aa13.41□□□□□ -0.26
SCARB1-209ENST00000545305 PRR5-ARHGAP8B1AHC4 643 aa13.41□□□□□ -0.26
SCARB1-209ENST00000545305 SLCO1B7G3V0H7 640 aa13.41□□□□□ -0.26
SCARB1-209ENST00000545305 E2F3O00716 465 aa13.41□□□□□ -0.26
SCARB1-209ENST00000545305 TAPBPO15533 448 aa13.41□□□□□ -0.26
SCARB1-209ENST00000545305 KDM1AO60341 852 aa13.41□□□□□ -0.26
SCARB1-209ENST00000545305 CRCPO75575 148 aa13.41□□□□□ -0.26
SCARB1-209ENST00000545305 WDR47O94967 919 aa13.41□□□□□ -0.26
SCARB1-209ENST00000545305 WNT1P04628 370 aa13.41□□□□□ -0.26
SCARB1-209ENST00000545305 GNSP15586 552 aa13.41□□□□□ -0.26
SCARB1-209ENST00000545305 JUNDP17535 347 aa13.41□□□□□ -0.26
SCARB1-209ENST00000545305 AK4P27144 223 aaPredicted RBP13.41□□□□□ -0.26
SCARB1-209ENST00000545305 GGT5P36269 586 aa13.41□□□□□ -0.26
SCARB1-209ENST00000545305 ARL1P40616 181 aaPredicted RBP13.41□□□□□ -0.26
SCARB1-209ENST00000545305 RPL14P50914 215 aaKnown RBP13.41□□□□□ -0.26
SCARB1-209ENST00000545305 AFF3P51826 1226 aaKnown RBP13.41□□□□□ -0.26
SCARB1-209ENST00000545305 CDH13P55290 713 aa13.41□□□□□ -0.26
SCARB1-209ENST00000545305 SF3A3Q12874 501 aaKnown RBP eCLIP13.41□□□□□ -0.266e-7■■■■□ 20.2
SCARB1-209ENST00000545305 GTF2H2Q13888 395 aa13.41□□□□□ -0.26
SCARB1-209ENST00000545305 TCEA2Q15560 299 aa13.41□□□□□ -0.26
SCARB1-209ENST00000545305 SH2D4BQ5SQS7 431 aa13.41□□□□□ -0.26
SCARB1-209ENST00000545305 PMS2CLQ68D20 193 aa13.41□□□□□ -0.26
SCARB1-209ENST00000545305 GTF2H2CQ6P1K8 395 aa13.41□□□□□ -0.26
SCARB1-209ENST00000545305 WASH2PQ6VEQ5 465 aa13.41□□□□□ -0.26
SCARB1-209ENST00000545305 CEP68Q76N32 757 aa13.41□□□□□ -0.26
SCARB1-209ENST00000545305 GOLGA7Q7Z5G4 137 aa13.41□□□□□ -0.26
SCARB1-209ENST00000545305 BMP8AQ7Z5Y6 402 aa13.41□□□□□ -0.26
SCARB1-209ENST00000545305 PIGWQ7Z7B1 504 aa13.41□□□□□ -0.26
SCARB1-209ENST00000545305 SYTL1Q8IYJ3 562 aa13.41□□□□□ -0.26
SCARB1-209ENST00000545305 MAML2Q8IZL2 1156 aaPredicted RBP13.41□□□□□ -0.26
SCARB1-209ENST00000545305 ZNF781Q8N8C0 355 aa13.41□□□□□ -0.26
SCARB1-209ENST00000545305 SNX31Q8N9S9 440 aa13.41□□□□□ -0.26
SCARB1-209ENST00000545305 PHC3Q8NDX5 983 aa13.41□□□□□ -0.26
SCARB1-209ENST00000545305 OR5AR1Q8NGP9 310 aa13.41□□□□□ -0.26
SCARB1-209ENST00000545305 OR5K2Q8NHB8 316 aa13.41□□□□□ -0.26
SCARB1-209ENST00000545305 AGR3Q8TD06 166 aa13.41□□□□□ -0.26
SCARB1-209ENST00000545305 ATP6V1E2Q96A05 226 aa13.41□□□□□ -0.26
SCARB1-209ENST00000545305 ESAMQ96AP7 390 aa13.41□□□□□ -0.26
SCARB1-209ENST00000545305 FAR2Q96K12 515 aa13.41□□□□□ -0.26
SCARB1-209ENST00000545305 NSUN5Q96P11 429 aaKnown RBP13.41□□□□□ -0.26
SCARB1-209ENST00000545305 FERD3LQ96RJ6 166 aa13.41□□□□□ -0.26
SCARB1-209ENST00000545305 INSM2Q96T92 566 aaPredicted RBP13.41□□□□□ -0.26
SCARB1-209ENST00000545305 PLCD4Q9BRC7 762 aa13.41□□□□□ -0.26
SCARB1-209ENST00000545305 SLC32A1Q9H598 525 aa13.41□□□□□ -0.26
SCARB1-209ENST00000545305 MVB12BQ9H7P6 319 aa13.41□□□□□ -0.26
SCARB1-209ENST00000545305 MID1IP1Q9NPA3 183 aa13.41□□□□□ -0.26
SCARB1-209ENST00000545305 WASH6PQ9NQA3 447 aa13.41□□□□□ -0.26
SCARB1-209ENST00000545305 PRDM8Q9NQV8 689 aa13.41□□□□□ -0.26
SCARB1-209ENST00000545305 PNPOQ9NVS9 261 aa13.41□□□□□ -0.26
SCARB1-209ENST00000545305 DNAJC28Q9NX36 388 aa13.41□□□□□ -0.26
SCARB1-209ENST00000545305 SPATA7Q9P0W8 599 aa13.41□□□□□ -0.26
SCARB1-209ENST00000545305 STOX2Q9P2F5 926 aaPredicted RBP13.41□□□□□ -0.26
SCARB1-209ENST00000545305 VTI1BQ9UEU0 232 aa13.41□□□□□ -0.26
SCARB1-209ENST00000545305 SUSD2Q9UGT4 822 aa13.41□□□□□ -0.26
SCARB1-209ENST00000545305 APOBEC3BQ9UH17 382 aaKnown RBP13.41□□□□□ -0.26
SCARB1-209ENST00000545305 POLG2Q9UHN1 485 aa13.41□□□□□ -0.26
SCARB1-209ENST00000545305 HAO1Q9UJM8 370 aa13.41□□□□□ -0.26
SCARB1-209ENST00000545305 PNMA8BQ9ULN7 279 aaPredicted RBP13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms