RNA–Protein interactions for RNA: ENST00000544999.2

HOXD8-204, Transcript of homeobox D8, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HOXD8, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8-204ENST00000544999 SDR42E2A6NKP2 422 aa16.39■□□□□ 0.21
HOXD8-204ENST00000544999 TERTO14746 1132 aaKnown RBP16.39■□□□□ 0.21
HOXD8-204ENST00000544999 KPNA5O15131 536 aa16.39■□□□□ 0.21
HOXD8-204ENST00000544999 PFDN6O15212 129 aa16.39■□□□□ 0.21
HOXD8-204ENST00000544999 ZNF185O15231 689 aa16.39■□□□□ 0.21
HOXD8-204ENST00000544999 NKX2-8O15522 239 aa16.39■□□□□ 0.21
HOXD8-204ENST00000544999 MAP3K7O43318 606 aa16.39■□□□□ 0.21
HOXD8-204ENST00000544999 CPNE3O75131 537 aaKnown RBP16.39■□□□□ 0.21
HOXD8-204ENST00000544999 SLCO2B1O94956 709 aa16.39■□□□□ 0.21
HOXD8-204ENST00000544999 RPN2P04844 631 aa16.39■□□□□ 0.21
HOXD8-204ENST00000544999 MSL3P1P0C860 447 aa16.39■□□□□ 0.21
HOXD8-204ENST00000544999 TPBGLP0DKB5 382 aa16.39■□□□□ 0.21
HOXD8-204ENST00000544999 TCP1P17987 556 aaKnown RBP16.39■□□□□ 0.21
HOXD8-204ENST00000544999 OGNP20774 298 aaKnown RBP16.39■□□□□ 0.21
HOXD8-204ENST00000544999 F8A1P23610 371 aa16.39■□□□□ 0.21
HOXD8-204ENST00000544999 CDC20Q12834 499 aa16.39■□□□□ 0.21
HOXD8-204ENST00000544999 CASC4Q6P4E1 433 aa16.39■□□□□ 0.21
HOXD8-204ENST00000544999 SPESP1Q6UW49 350 aa16.39■□□□□ 0.21
HOXD8-204ENST00000544999 UNC5DQ6UXZ4 953 aa16.39■□□□□ 0.21
HOXD8-204ENST00000544999 SERPINB12Q96P63 405 aa16.39■□□□□ 0.21
HOXD8-204ENST00000544999 TRAPPC9Q96Q05 1148 aa16.39■□□□□ 0.21
HOXD8-204ENST00000544999 TCF12Q99081 682 aa16.39■□□□□ 0.21
HOXD8-204ENST00000544999 TWSG1Q9GZX9 223 aa16.39■□□□□ 0.21
HOXD8-204ENST00000544999 KCND3Q9UK17 655 aa16.39■□□□□ 0.21
HOXD8-204ENST00000544999 SCRG1O75711 98 aa16.38■□□□□ 0.21
HOXD8-204ENST00000544999 NTRK1P04629 796 aa16.38■□□□□ 0.21
HOXD8-204ENST00000544999 CHRM5P08912 532 aaPredicted RBP16.38■□□□□ 0.21
HOXD8-204ENST00000544999 SFTPCP11686 197 aa16.38■□□□□ 0.21
HOXD8-204ENST00000544999 TCN2P20062 427 aa16.38■□□□□ 0.21
HOXD8-204ENST00000544999 PKLRP30613 574 aa16.38■□□□□ 0.21
HOXD8-204ENST00000544999 ADARP55265 1226 aaKnown RBP16.38■□□□□ 0.21
HOXD8-204ENST00000544999 EIF3BP55884 814 aaKnown RBP16.38■□□□□ 0.21
HOXD8-204ENST00000544999 DHX34Q14147 1143 aaKnown RBP16.38■□□□□ 0.21
HOXD8-204ENST00000544999 KYNUQ16719 465 aa16.38■□□□□ 0.21
HOXD8-204ENST00000544999 CTSL3PQ5NE16 218 aa16.38■□□□□ 0.21
HOXD8-204ENST00000544999 BORAQ6PGQ7 559 aa16.38■□□□□ 0.21
HOXD8-204ENST00000544999 HOOK3Q86VS8 718 aa16.38■□□□□ 0.21
HOXD8-204ENST00000544999 TMEM126BQ8IUX1 230 aa16.38■□□□□ 0.21
HOXD8-204ENST00000544999 DCUN1D3Q8IWE4 304 aa16.38■□□□□ 0.21
HOXD8-204ENST00000544999 NAT8LQ8N9F0 302 aa16.38■□□□□ 0.21
HOXD8-204ENST00000544999 LPGAT1Q92604 370 aa16.38■□□□□ 0.21
HOXD8-204ENST00000544999 OR2A14Q96R47 310 aa16.38■□□□□ 0.21
HOXD8-204ENST00000544999 PCDHGA6Q9Y5G7 932 aa16.38■□□□□ 0.21
HOXD8-204ENST00000544999 MRPS18BQ9Y676 258 aaKnown RBP16.38■□□□□ 0.21
HOXD8-204ENST00000544999 USP27XA6NNY8 438 aa16.37■□□□□ 0.21
HOXD8-204ENST00000544999 C21orf140B9A014 251 aa16.37■□□□□ 0.21
HOXD8-204ENST00000544999 TMEM150CB9EJG8 249 aa16.37■□□□□ 0.21
HOXD8-204ENST00000544999 GOLGA8KD6RF30 607 aa16.37■□□□□ 0.21
HOXD8-204ENST00000544999 H3BMM5 538 aa16.37■□□□□ 0.21
HOXD8-204ENST00000544999 GOLGA8TH3BQL2 631 aa16.37■□□□□ 0.21
HOXD8-204ENST00000544999 GOLGA8MH3BSY2 632 aa16.37■□□□□ 0.21
HOXD8-204ENST00000544999 PRKAR1AP10644 381 aa16.37■□□□□ 0.21
HOXD8-204ENST00000544999 PVRP15151 417 aa16.37■□□□□ 0.21
HOXD8-204ENST00000544999 UGT2B7P16662 529 aa16.37■□□□□ 0.21
HOXD8-204ENST00000544999 MAGEA3P43357 314 aa16.37■□□□□ 0.21
HOXD8-204ENST00000544999 RAB28P51157 221 aa16.37■□□□□ 0.21
HOXD8-204ENST00000544999 ABRQ12979 859 aa16.37■□□□□ 0.21
HOXD8-204ENST00000544999 DNASE1L3Q13609 305 aa16.37■□□□□ 0.21
HOXD8-204ENST00000544999 ANKRD20A4Q4UJ75 823 aa16.37■□□□□ 0.21
HOXD8-204ENST00000544999 PLEKHS1Q5SXH7 462 aa16.37■□□□□ 0.21
HOXD8-204ENST00000544999 OTOAQ7RTW8 1153 aa16.37■□□□□ 0.21
HOXD8-204ENST00000544999 CILP2Q8IUL8 1156 aa16.37■□□□□ 0.21
HOXD8-204ENST00000544999 PPIL6Q8IXY8 311 aa16.37■□□□□ 0.21
HOXD8-204ENST00000544999 CFAP61Q8NHU2 1237 aa16.37■□□□□ 0.21
HOXD8-204ENST00000544999 GSDMBQ8TAX9 411 aa16.37■□□□□ 0.21
HOXD8-204ENST00000544999 CT55Q8WUE5 264 aa16.37■□□□□ 0.21
HOXD8-204ENST00000544999 ZNF669Q96BR6 464 aaPredicted RBP16.37■□□□□ 0.21
HOXD8-204ENST00000544999 LRFN5Q96NI6 719 aa16.37■□□□□ 0.21
HOXD8-204ENST00000544999 BIRC8Q96P09 236 aa16.37■□□□□ 0.21
HOXD8-204ENST00000544999 SPHK1Q9NYA1 384 aa16.37■□□□□ 0.21
HOXD8-204ENST00000544999 PLAGL1Q9UM63 463 aa16.37■□□□□ 0.21
HOXD8-204ENST00000544999 VPS9D1Q9Y2B5 631 aa16.37■□□□□ 0.21
HOXD8-204ENST00000544999 PCDHB3Q9Y5E6 796 aa16.37■□□□□ 0.21
HOXD8-204ENST00000544999 A0A0J9YY10 115 aa16.36■□□□□ 0.21
HOXD8-204ENST00000544999 ESR1P03372 595 aa16.36■□□□□ 0.21
HOXD8-204ENST00000544999 FAM87AP0C7U9 286 aa16.36■□□□□ 0.21
HOXD8-204ENST00000544999 OAS2P29728 719 aaKnown RBP16.36■□□□□ 0.21
HOXD8-204ENST00000544999 FMO4P31512 558 aa16.36■□□□□ 0.21
HOXD8-204ENST00000544999 KIR2DS3Q14952 304 aa16.36■□□□□ 0.21
HOXD8-204ENST00000544999 PPP1R7Q15435 360 aa16.36■□□□□ 0.21
HOXD8-204ENST00000544999 SLC5A12Q1EHB4 618 aa16.36■□□□□ 0.21
HOXD8-204ENST00000544999 RNASEH2BQ5TBB1 312 aaKnown RBP16.36■□□□□ 0.21
HOXD8-204ENST00000544999 NEPROQ6NW34 567 aa16.36■□□□□ 0.21
HOXD8-204ENST00000544999 C16orf46Q6P387 395 aa16.36■□□□□ 0.21
HOXD8-204ENST00000544999 TMEM135Q86UB9 458 aa16.36■□□□□ 0.21
HOXD8-204ENST00000544999 C19orf47Q8N9M1 422 aaKnown RBP16.36■□□□□ 0.21
HOXD8-204ENST00000544999 OR1L3Q8NH93 324 aa16.36■□□□□ 0.21
HOXD8-204ENST00000544999 FLVCR1-AS1Q8TAF5 88 aa16.36■□□□□ 0.21
HOXD8-204ENST00000544999 TRIM56Q9BRZ2 755 aaKnown RBP16.36■□□□□ 0.21
HOXD8-204ENST00000544999 MENTQ9BUN1 341 aa16.36■□□□□ 0.21
HOXD8-204ENST00000544999 CHRNA10Q9GZZ6 450 aa16.36■□□□□ 0.21
HOXD8-204ENST00000544999 KLHL25Q9H0H3 589 aa16.36■□□□□ 0.21
HOXD8-204ENST00000544999 ADNPQ9H2P0 1102 aa16.36■□□□□ 0.21
HOXD8-204ENST00000544999 INTS10Q9NVR2 710 aaKnown RBP16.36■□□□□ 0.21
HOXD8-204ENST00000544999 GEMIN8Q9NWZ8 242 aaKnown RBP16.36■□□□□ 0.21
HOXD8-204ENST00000544999 SERTAD3Q9UJW9 196 aa16.36■□□□□ 0.21
HOXD8-204ENST00000544999 MRFAP1Q9Y605 127 aa16.36■□□□□ 0.21
HOXD8-204ENST00000544999 SMG1Q96Q15 3661 aaKnown RBP16.36■□□□□ 0.21
HOXD8-204ENST00000544999 COL6A6A6NMZ7 2263 aa16.35■□□□□ 0.21
HOXD8-204ENST00000544999 ZCWPW2A0A1B0GU75 182 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms