RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 POP4O95707 220 aaKnown RBP5.68□□□□□ -1.5
VPS50-220ENST00000544910 GNRH1P01148 92 aa5.68□□□□□ -1.5
VPS50-220ENST00000544910 C8BP07358 591 aa5.68□□□□□ -1.5
VPS50-220ENST00000544910 ELFN1P0C7U0 828 aa5.68□□□□□ -1.5
VPS50-220ENST00000544910 HSMCR30P0CW71 290 aa5.68□□□□□ -1.5
VPS50-220ENST00000544910 CKMT2P17540 419 aa5.68□□□□□ -1.5
VPS50-220ENST00000544910 POU1F1P28069 291 aa5.68□□□□□ -1.5
VPS50-220ENST00000544910 HOXC13P31276 330 aa5.68□□□□□ -1.5
VPS50-220ENST00000544910 GRK3P35626 688 aa5.68□□□□□ -1.5
VPS50-220ENST00000544910 STAT5AP42229 794 aa5.68□□□□□ -1.5
VPS50-220ENST00000544910 GPR1P46091 355 aa5.68□□□□□ -1.5
VPS50-220ENST00000544910 ASMTP46597 345 aa5.68□□□□□ -1.5
VPS50-220ENST00000544910 CDC42P60953 191 aa5.68□□□□□ -1.5
VPS50-220ENST00000544910 TGFBIQ15582 683 aa5.68□□□□□ -1.5
VPS50-220ENST00000544910 ZFP69Q49AA0 526 aa5.68□□□□□ -1.5
VPS50-220ENST00000544910 CARD16Q5EG05 197 aa5.68□□□□□ -1.5
VPS50-220ENST00000544910 ZNF789Q5FWF6 425 aa5.68□□□□□ -1.5
VPS50-220ENST00000544910 COQ5Q5HYK3 327 aa5.68□□□□□ -1.5
VPS50-220ENST00000544910 ZNF57Q68EA5 555 aaPredicted RBP5.68□□□□□ -1.5
VPS50-220ENST00000544910 NEK10Q6ZWH5 1172 aa5.68□□□□□ -1.5
VPS50-220ENST00000544910 CYP2U1Q7Z449 544 aa5.68□□□□□ -1.5
VPS50-220ENST00000544910 FGD2Q7Z6J4 655 aa5.68□□□□□ -1.5
VPS50-220ENST00000544910 ISCA2Q86U28 154 aa5.68□□□□□ -1.5
VPS50-220ENST00000544910 ZC3H7AQ8IWR0 971 aaKnown RBP5.68□□□□□ -1.5
VPS50-220ENST00000544910 KBTBD2Q8IY47 623 aa5.68□□□□□ -1.5
VPS50-220ENST00000544910 KRT78Q8N1N4 520 aa5.68□□□□□ -1.5
VPS50-220ENST00000544910 MINDY1Q8N5J2 469 aa5.68□□□□□ -1.5
VPS50-220ENST00000544910 ANKLE1Q8NAG6 615 aa5.68□□□□□ -1.5
VPS50-220ENST00000544910 ANKRD49Q8WVL7 239 aa5.68□□□□□ -1.5
VPS50-220ENST00000544910 TMEM106CQ9BVX2 250 aa5.68□□□□□ -1.5
VPS50-220ENST00000544910 CD244Q9BZW8 370 aa5.68□□□□□ -1.5
VPS50-220ENST00000544910 RNF208Q9H0X6 261 aa5.68□□□□□ -1.5
VPS50-220ENST00000544910 CCM2LQ9NUG4 571 aaPredicted RBP5.68□□□□□ -1.5
VPS50-220ENST00000544910 AIG1Q9NVV5 245 aa5.68□□□□□ -1.5
VPS50-220ENST00000544910 RIMKLBQ9ULI2 386 aa5.68□□□□□ -1.5
VPS50-220ENST00000544910 NOBOXO60393 691 aa5.67□□□□□ -1.5
VPS50-220ENST00000544910 G6PDP11413 515 aa5.67□□□□□ -1.5
VPS50-220ENST00000544910 CDK9P50750 372 aaKnown RBP5.67□□□□□ -1.5
VPS50-220ENST00000544910 INHBCP55103 352 aa5.67□□□□□ -1.5
VPS50-220ENST00000544910 MGAT3Q09327 533 aa5.67□□□□□ -1.5
VPS50-220ENST00000544910 DAG1Q14118 895 aa5.67□□□□□ -1.5
VPS50-220ENST00000544910 SLC14A2Q15849 920 aa5.67□□□□□ -1.5
VPS50-220ENST00000544910 SDE2Q6IQ49 451 aa5.67□□□□□ -1.5
VPS50-220ENST00000544910 TMEM214Q6NUQ4 689 aaKnown RBP5.67□□□□□ -1.5
VPS50-220ENST00000544910 NCEH1Q6PIU2 408 aa5.67□□□□□ -1.5
VPS50-220ENST00000544910 CASP12Q6UXS9 341 aa5.67□□□□□ -1.5
VPS50-220ENST00000544910 FIBCD1Q8N539 461 aa5.67□□□□□ -1.5
VPS50-220ENST00000544910 LRRC17Q8N6Y2 441 aa5.67□□□□□ -1.5
VPS50-220ENST00000544910 PSMA8Q8TAA3 256 aa5.67□□□□□ -1.5
VPS50-220ENST00000544910 PTERQ96BW5 349 aa5.67□□□□□ -1.5
VPS50-220ENST00000544910 RNFT2Q96EX2 444 aa5.67□□□□□ -1.5
VPS50-220ENST00000544910 ABCB10Q9NRK6 738 aa5.67□□□□□ -1.5
VPS50-220ENST00000544910 ATP6V1HQ9UI12 483 aa5.67□□□□□ -1.5
VPS50-220ENST00000544910 H3BSA7 217 aa5.67□□□□□ -1.5
VPS50-220ENST00000544910 GABBR2O75899 941 aa5.67□□□□□ -1.5
VPS50-220ENST00000544910 CCNKO75909 580 aa5.67□□□□□ -1.5
VPS50-220ENST00000544910 PGLSO95336 258 aa5.67□□□□□ -1.5
VPS50-220ENST00000544910 GJB5O95377 273 aa5.67□□□□□ -1.5
VPS50-220ENST00000544910 CXCL14O95715 111 aa5.67□□□□□ -1.5
VPS50-220ENST00000544910 ENO2P09104 434 aaPredicted RBP5.67□□□□□ -1.5
VPS50-220ENST00000544910 ARCN1P48444 511 aaKnown RBP5.67□□□□□ -1.5
VPS50-220ENST00000544910 SH3BP2P78314 561 aa5.67□□□□□ -1.5
VPS50-220ENST00000544910 CHRNA6Q15825 494 aa5.67□□□□□ -1.5
VPS50-220ENST00000544910 DEFB115Q30KQ5 88 aa5.67□□□□□ -1.5
VPS50-220ENST00000544910 ZBED5Q49AG3 693 aa5.67□□□□□ -1.5
VPS50-220ENST00000544910 RABL3Q5HYI8 236 aa5.67□□□□□ -1.5
VPS50-220ENST00000544910 DNAJB7Q7Z6W7 309 aaPredicted RBP5.67□□□□□ -1.5
VPS50-220ENST00000544910 DSG4Q86SJ6 1040 aa5.67□□□□□ -1.5
VPS50-220ENST00000544910 DEPDC4Q8N2C3 294 aa5.67□□□□□ -1.5
VPS50-220ENST00000544910 TMBIM1Q969X1 311 aa5.67□□□□□ -1.5
VPS50-220ENST00000544910 ZHX1-C8orf76Q96EF9 292 aa5.67□□□□□ -1.5
VPS50-220ENST00000544910 TMEM74Q96NL1 305 aa5.67□□□□□ -1.5
VPS50-220ENST00000544910 QRFPRQ96P65 431 aa5.67□□□□□ -1.5
VPS50-220ENST00000544910 PSKH2Q96QS6 385 aa5.67□□□□□ -1.5
VPS50-220ENST00000544910 GPR62Q9BZJ7 368 aa5.67□□□□□ -1.5
VPS50-220ENST00000544910 CXorf21Q9HAI6 301 aa5.67□□□□□ -1.5
VPS50-220ENST00000544910 THG1LQ9NWX6 298 aaKnown RBP5.67□□□□□ -1.5
VPS50-220ENST00000544910 LRRC14BA6NHZ5 514 aa5.67□□□□□ -1.5
VPS50-220ENST00000544910 IQCF5A8MTL0 148 aa5.67□□□□□ -1.5
VPS50-220ENST00000544910 MAGEB17A8MXT2 336 aa5.67□□□□□ -1.5
VPS50-220ENST00000544910 TMEM189-UBE2V1I3L0A0 370 aa5.67□□□□□ -1.5
VPS50-220ENST00000544910 PER2O15055 1255 aa5.67□□□□□ -1.5
VPS50-220ENST00000544910 FADS2O95864 444 aaKnown RBP5.67□□□□□ -1.5
VPS50-220ENST00000544910 GLUD1P00367 558 aa5.67□□□□□ -1.5
VPS50-220ENST00000544910 ACRV1P26436 265 aa5.67□□□□□ -1.5
VPS50-220ENST00000544910 PPP2R1BP30154 601 aa5.67□□□□□ -1.5
VPS50-220ENST00000544910 TRIM32Q13049 653 aa5.67□□□□□ -1.5
VPS50-220ENST00000544910 CCDC157Q569K6 752 aa5.67□□□□□ -1.5
VPS50-220ENST00000544910 FGD3Q5JSP0 725 aa5.67□□□□□ -1.5
VPS50-220ENST00000544910 BICRALQ6AI39 1079 aa5.67□□□□□ -1.5
VPS50-220ENST00000544910 CAPN13Q6MZZ7 669 aaPredicted RBP5.67□□□□□ -1.5
VPS50-220ENST00000544910 BLOC1S3Q6QNY0 202 aa5.67□□□□□ -1.5
VPS50-220ENST00000544910 C11orf74Q86VG3 221 aa5.67□□□□□ -1.5
VPS50-220ENST00000544910 CYP4Z2PQ8N1L4 340 aa5.67□□□□□ -1.5
VPS50-220ENST00000544910 TRPV3Q8NET8 790 aa5.67□□□□□ -1.5
VPS50-220ENST00000544910 ACDQ96AP0 544 aa5.67□□□□□ -1.5
VPS50-220ENST00000544910 PPCDCQ96CD2 204 aa5.67□□□□□ -1.5
VPS50-220ENST00000544910 LRCH3Q96II8 777 aa5.67□□□□□ -1.5
VPS50-220ENST00000544910 MGME1Q9BQP7 344 aa5.67□□□□□ -1.5
VPS50-220ENST00000544910 NLNQ9BYT8 704 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms