RNA–Protein interactions for RNA: ENST00000544552.5

PAAF1-214, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 1 (best) BASIC

Gene PAAF1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-214ENST00000544552 EMX2Q04743 252 aa12.44□□□□□ -0.42
PAAF1-214ENST00000544552 ZNF33BQ06732 778 aa12.44□□□□□ -0.42
PAAF1-214ENST00000544552 ABRQ12979 859 aa12.44□□□□□ -0.42
PAAF1-214ENST00000544552 LRP8Q14114 963 aa12.44□□□□□ -0.42
PAAF1-214ENST00000544552 RPS6KA2Q15349 733 aa12.44□□□□□ -0.42
PAAF1-214ENST00000544552 KIF19Q2TAC6 998 aa12.44□□□□□ -0.42
PAAF1-214ENST00000544552 WSCD2Q2TBF2 565 aa12.44□□□□□ -0.42
PAAF1-214ENST00000544552 ATP6AP1LQ52LC2 224 aa12.44□□□□□ -0.42
PAAF1-214ENST00000544552 PDCD4Q53EL6 469 aaKnown RBP12.44□□□□□ -0.42
PAAF1-214ENST00000544552 COQ5Q5HYK3 327 aa12.44□□□□□ -0.42
PAAF1-214ENST00000544552 PAOXQ6QHF9 649 aa12.44□□□□□ -0.42
PAAF1-214ENST00000544552 ZNF547Q8IVP9 402 aa12.44□□□□□ -0.42
PAAF1-214ENST00000544552 L3MBTL4Q8NA19 623 aa12.44□□□□□ -0.42
PAAF1-214ENST00000544552 IL17RCQ8NAC3 791 aa12.44□□□□□ -0.42
PAAF1-214ENST00000544552 OR2L2Q8NH16 312 aa12.44□□□□□ -0.42
PAAF1-214ENST00000544552 DNASE1L2Q92874 299 aa12.44□□□□□ -0.42
PAAF1-214ENST00000544552 USP7Q93009 1102 aa12.44□□□□□ -0.42
PAAF1-214ENST00000544552 PPP3R2Q96LZ3 170 aa12.44□□□□□ -0.42
PAAF1-214ENST00000544552 C1QTNF2Q9BXJ5 285 aa12.44□□□□□ -0.42
PAAF1-214ENST00000544552 WDR41Q9HAD4 459 aa12.44□□□□□ -0.42
PAAF1-214ENST00000544552 DNAJC11Q9NVH1 559 aa12.44□□□□□ -0.42
PAAF1-214ENST00000544552 NDUFAF1Q9Y375 327 aa12.44□□□□□ -0.42
PAAF1-214ENST00000544552 A0A1W2PP55 124 aa12.43□□□□□ -0.42
PAAF1-214ENST00000544552 SERTM1A2A2V5 107 aa12.43□□□□□ -0.42
PAAF1-214ENST00000544552 FBP2O00757 339 aa12.43□□□□□ -0.42
PAAF1-214ENST00000544552 LSM1O15116 133 aaKnown RBP12.43□□□□□ -0.42
PAAF1-214ENST00000544552 UGDHO60701 494 aa12.43□□□□□ -0.42
PAAF1-214ENST00000544552 POP7O75817 140 aaKnown RBP12.43□□□□□ -0.42
PAAF1-214ENST00000544552 PCDH8O95206 1070 aa12.43□□□□□ -0.42
PAAF1-214ENST00000544552 KRT6AP02538 564 aa12.43□□□□□ -0.42
PAAF1-214ENST00000544552 KRT6BP04259 564 aa12.43□□□□□ -0.42
PAAF1-214ENST00000544552 GLULP15104 373 aa12.43□□□□□ -0.42
PAAF1-214ENST00000544552 PCSK2P16519 638 aa12.43□□□□□ -0.42
PAAF1-214ENST00000544552 KRT6CP48668 564 aa12.43□□□□□ -0.42
PAAF1-214ENST00000544552 HTR6P50406 440 aa12.43□□□□□ -0.42
PAAF1-214ENST00000544552 SEC13P55735 322 aa12.43□□□□□ -0.42
PAAF1-214ENST00000544552 RPS21P63220 83 aaKnown RBP12.43□□□□□ -0.42
PAAF1-214ENST00000544552 CDK3Q00526 305 aa12.43□□□□□ -0.42
PAAF1-214ENST00000544552 RPA4Q13156 261 aa12.43□□□□□ -0.42
PAAF1-214ENST00000544552 MAP7D1Q3KQU3 841 aa12.43□□□□□ -0.42
PAAF1-214ENST00000544552 MMEL1Q495T6 779 aa12.43□□□□□ -0.42
PAAF1-214ENST00000544552 TCHHL1Q5QJ38 904 aaPredicted RBP12.43□□□□□ -0.42
PAAF1-214ENST00000544552 C1orf146Q5VVC0 180 aa12.43□□□□□ -0.42
PAAF1-214ENST00000544552 KIAA1161Q6NSJ0 714 aa12.43□□□□□ -0.42
PAAF1-214ENST00000544552 KIAA1211LQ6NV74 962 aa12.43□□□□□ -0.42
PAAF1-214ENST00000544552 BNC2Q6ZN30 1099 aaPredicted RBP12.43□□□□□ -0.42
PAAF1-214ENST00000544552 TRIM74Q86UV6 250 aa12.43□□□□□ -0.42
PAAF1-214ENST00000544552 TRAPPC5Q8IUR0 188 aa12.43□□□□□ -0.42
PAAF1-214ENST00000544552 PLCD3Q8N3E9 789 aa12.43□□□□□ -0.42
PAAF1-214ENST00000544552 SFRP1Q8N474 314 aa12.43□□□□□ -0.42
PAAF1-214ENST00000544552 DCBLD1Q8N8Z6 715 aa12.43□□□□□ -0.42
PAAF1-214ENST00000544552 PCYOX1LQ8NBM8 494 aa12.43□□□□□ -0.42
PAAF1-214ENST00000544552 PLA2G15Q8NCC3 412 aa12.43□□□□□ -0.42
PAAF1-214ENST00000544552 HM13Q8TCT9 377 aa12.43□□□□□ -0.42
PAAF1-214ENST00000544552 TEX101Q9BY14 249 aa12.43□□□□□ -0.42
PAAF1-214ENST00000544552 MKRN2Q9H000 416 aaKnown RBP12.43□□□□□ -0.42
PAAF1-214ENST00000544552 CD248Q9HCU0 757 aa12.43□□□□□ -0.42
PAAF1-214ENST00000544552 MRPL40Q9NQ50 206 aaKnown RBP12.43□□□□□ -0.42
PAAF1-214ENST00000544552 HEBP1Q9NRV9 189 aa12.43□□□□□ -0.42
PAAF1-214ENST00000544552 ZIM2Q9NZV7 527 aa12.43□□□□□ -0.42
PAAF1-214ENST00000544552 GIMAP2Q9UG22 337 aa12.43□□□□□ -0.42
PAAF1-214ENST00000544552 SERGEFQ9UGK8 458 aa12.43□□□□□ -0.42
PAAF1-214ENST00000544552 RNF11Q9Y3C5 154 aa12.43□□□□□ -0.42
PAAF1-214ENST00000544552 A0A1W2PQF6 199 aa12.42□□□□□ -0.42
PAAF1-214ENST00000544552 DYTNA2CJ06 578 aa12.42□□□□□ -0.42
PAAF1-214ENST00000544552 NPIPB8E9PQR5 432 aa12.42□□□□□ -0.42
PAAF1-214ENST00000544552 MANBAO00462 879 aa12.42□□□□□ -0.42
PAAF1-214ENST00000544552 RGS14O43566 566 aa12.42□□□□□ -0.42
PAAF1-214ENST00000544552 PLRG1O43660 514 aaKnown RBP12.42□□□□□ -0.42
PAAF1-214ENST00000544552 ADAM23O75077 832 aa12.42□□□□□ -0.42
PAAF1-214ENST00000544552 RNASEH2AO75792 299 aaKnown RBP12.42□□□□□ -0.42
PAAF1-214ENST00000544552 EGFP01133 1207 aa12.42□□□□□ -0.42
PAAF1-214ENST00000544552 DNTTP04053 509 aa12.42□□□□□ -0.42
PAAF1-214ENST00000544552 PDHA2P29803 388 aa12.42□□□□□ -0.42
PAAF1-214ENST00000544552 PREPP48147 710 aa12.42□□□□□ -0.42
PAAF1-214ENST00000544552 DIO3P55073 304 aa12.42□□□□□ -0.42
PAAF1-214ENST00000544552 PFN3P60673 137 aa12.42□□□□□ -0.42
PAAF1-214ENST00000544552 GRSF1Q12849 480 aaKnown RBP eCLIP12.42□□□□□ -0.42
PAAF1-214ENST00000544552 ABRAXAS2Q15018 415 aa12.42□□□□□ -0.42
PAAF1-214ENST00000544552 PIGGQ5H8A4 983 aa12.42□□□□□ -0.42
PAAF1-214ENST00000544552 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.42□□□□□ -0.42
PAAF1-214ENST00000544552 REP15Q6BDI9 236 aa12.42□□□□□ -0.42
PAAF1-214ENST00000544552 NEK5Q6P3R8 708 aa12.42□□□□□ -0.42
PAAF1-214ENST00000544552 BLOC1S3Q6QNY0 202 aa12.42□□□□□ -0.42
PAAF1-214ENST00000544552 SCIMPQ6UWF3 145 aa12.42□□□□□ -0.42
PAAF1-214ENST00000544552 XKR5Q6UX68 686 aa12.42□□□□□ -0.42
PAAF1-214ENST00000544552 RIPOR1Q6ZS17 1223 aa12.42□□□□□ -0.42
PAAF1-214ENST00000544552 C11orf96Q7Z7L8 435 aa12.42□□□□□ -0.42
PAAF1-214ENST00000544552 HEATR4Q86WZ0 1026 aa12.42□□□□□ -0.42
PAAF1-214ENST00000544552 CFAP206Q8IYR0 622 aa12.42□□□□□ -0.42
PAAF1-214ENST00000544552 SLC44A3Q8N4M1 653 aa12.42□□□□□ -0.42
PAAF1-214ENST00000544552 LILRA3Q8N6C8 439 aaPredicted RBP12.42□□□□□ -0.42
PAAF1-214ENST00000544552 OR9I1Q8NGQ6 314 aa12.42□□□□□ -0.42
PAAF1-214ENST00000544552 ROPN1LQ96C74 230 aa12.42□□□□□ -0.42
PAAF1-214ENST00000544552 CDRT15Q96T59 188 aa12.42□□□□□ -0.42
PAAF1-214ENST00000544552 NPAS2Q99743 824 aa12.42□□□□□ -0.42
PAAF1-214ENST00000544552 ACTR8Q9H981 624 aa12.42□□□□□ -0.42
PAAF1-214ENST00000544552 SLC52A3Q9NQ40 469 aa12.42□□□□□ -0.42
PAAF1-214ENST00000544552 FBXL12Q9NXK8 326 aa12.42□□□□□ -0.42
PAAF1-214ENST00000544552 SNX6Q9UNH7 406 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms