RNA–Protein interactions for RNA: ENST00000543886.5

PTPRO-209, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-209ENST00000543886 VN1R2Q8NFZ6 395 aa16.66■□□□□ 0.26
PTPRO-209ENST00000543886 OR2T34Q8NGX1 318 aa16.66■□□□□ 0.26
PTPRO-209ENST00000543886 OR2T3Q8NH03 318 aa16.66■□□□□ 0.26
PTPRO-209ENST00000543886 DNAJB14Q8TBM8 379 aa16.66■□□□□ 0.26
PTPRO-209ENST00000543886 PIP4K2CQ8TBX8 421 aa16.66■□□□□ 0.26
PTPRO-209ENST00000543886 USP7Q93009 1102 aa16.66■□□□□ 0.26
PTPRO-209ENST00000543886 TMEM125Q96AQ2 219 aa16.66■□□□□ 0.26
PTPRO-209ENST00000543886 TMEM159Q96B96 161 aa16.66■□□□□ 0.26
PTPRO-209ENST00000543886 NR1H4Q96RI1 486 aaPredicted RBP16.66■□□□□ 0.26
PTPRO-209ENST00000543886 LRTM1Q9HBL6 345 aa16.66■□□□□ 0.26
PTPRO-209ENST00000543886 GMPR2Q9P2T1 348 aaKnown RBP16.66■□□□□ 0.26
PTPRO-209ENST00000543886 ZNHIT2Q9UHR6 403 aa16.66■□□□□ 0.26
PTPRO-209ENST00000543886 CHD9Q3L8U1 2897 aa16.66■□□□□ 0.26
PTPRO-209ENST00000543886 C15orf38-AP3S2A0A0A6YYH1 394 aa16.66■□□□□ 0.26
PTPRO-209ENST00000543886 GRXCR2A6NFK2 248 aa16.66■□□□□ 0.26
PTPRO-209ENST00000543886 INPP4BO15327 924 aa16.66■□□□□ 0.26
PTPRO-209ENST00000543886 PAPLNO95428 1278 aa16.66■□□□□ 0.26
PTPRO-209ENST00000543886 GSTM1P09488 218 aa16.66■□□□□ 0.26
PTPRO-209ENST00000543886 EPORP19235 508 aa16.66■□□□□ 0.26
PTPRO-209ENST00000543886 SLC7A1P30825 629 aa16.66■□□□□ 0.26
PTPRO-209ENST00000543886 METAP1P53582 386 aa16.66■□□□□ 0.26
PTPRO-209ENST00000543886 GSTM4Q03013 218 aa16.66■□□□□ 0.26
PTPRO-209ENST00000543886 ELAVL3Q14576 367 aaKnown RBP16.66■□□□□ 0.26
PTPRO-209ENST00000543886 GGTA1PQ4G0N0 100 aa16.66■□□□□ 0.26
PTPRO-209ENST00000543886 NAIF1Q69YI7 327 aaPredicted RBP16.66■□□□□ 0.26
PTPRO-209ENST00000543886 ARPINQ7Z6K5 226 aa16.66■□□□□ 0.26
PTPRO-209ENST00000543886 ZUFSPQ96AP4 578 aa16.66■□□□□ 0.26
PTPRO-209ENST00000543886 DTD2Q96FN9 168 aa16.66■□□□□ 0.26
PTPRO-209ENST00000543886 PPP1R16AQ96I34 528 aa16.66■□□□□ 0.26
PTPRO-209ENST00000543886 FAM83CQ9BQN1 747 aa16.66■□□□□ 0.26
PTPRO-209ENST00000543886 MCOLN1Q9GZU1 580 aa16.66■□□□□ 0.26
PTPRO-209ENST00000543886 DNAJC11Q9NVH1 559 aa16.66■□□□□ 0.26
PTPRO-209ENST00000543886 GDE1Q9NZC3 331 aa16.66■□□□□ 0.26
PTPRO-209ENST00000543886 SNX6Q9UNH7 406 aa16.66■□□□□ 0.26
PTPRO-209ENST00000543886 YBX2Q9Y2T7 364 aaKnown RBP16.66■□□□□ 0.26
PTPRO-209ENST00000543886 RANBP2P49792 3224 aaKnown RBP16.66■□□□□ 0.26
PTPRO-209ENST00000543886 MUC22E2RYF6 1773 aaPredicted RBP16.65■□□□□ 0.26
PTPRO-209ENST00000543886 SEC22BO75396 215 aa16.65■□□□□ 0.26
PTPRO-209ENST00000543886 RNASEH2AO75792 299 aaKnown RBP16.65■□□□□ 0.26
PTPRO-209ENST00000543886 UQCRBP14927 111 aa16.65■□□□□ 0.26
PTPRO-209ENST00000543886 ATP6V1B2P21281 511 aa16.65■□□□□ 0.26
PTPRO-209ENST00000543886 GRIA3P42263 894 aa16.65■□□□□ 0.26
PTPRO-209ENST00000543886 PRLHRP49683 370 aa16.65■□□□□ 0.26
PTPRO-209ENST00000543886 CTSCP53634 463 aa16.65■□□□□ 0.26
PTPRO-209ENST00000543886 TMEM115Q12893 351 aaPredicted RBP16.65■□□□□ 0.26
PTPRO-209ENST00000543886 TMEM154Q6P9G4 183 aa16.65■□□□□ 0.26
PTPRO-209ENST00000543886 SLC2A7Q6PXP3 512 aa16.65■□□□□ 0.26
PTPRO-209ENST00000543886 RGL4Q8IZJ4 473 aa16.65■□□□□ 0.26
PTPRO-209ENST00000543886 GLMNQ92990 594 aa16.65■□□□□ 0.26
PTPRO-209ENST00000543886 ARRDC3Q96B67 414 aa16.65■□□□□ 0.26
PTPRO-209ENST00000543886 PYCR2Q96C36 320 aa16.65■□□□□ 0.26
PTPRO-209ENST00000543886 MTFMTQ96DP5 389 aaKnown RBP16.65■□□□□ 0.26
PTPRO-209ENST00000543886 DUS3LQ96G46 650 aaKnown RBP16.65■□□□□ 0.26
PTPRO-209ENST00000543886 COQ10AQ96MF6 247 aa16.65■□□□□ 0.26
PTPRO-209ENST00000543886 CCM2Q9BSQ5 444 aa16.65■□□□□ 0.26
PTPRO-209ENST00000543886 ACTL8Q9H568 366 aa16.65■□□□□ 0.26
PTPRO-209ENST00000543886 ELOVL6Q9H5J4 265 aa16.65■□□□□ 0.26
PTPRO-209ENST00000543886 ZFP14Q9HCL3 533 aa16.65■□□□□ 0.26
PTPRO-209ENST00000543886 DZANK1Q9NVP4 752 aa16.65■□□□□ 0.26
PTPRO-209ENST00000543886 OBP2AQ9NY56 170 aa16.65■□□□□ 0.26
PTPRO-209ENST00000543886 CDH23Q9H251 3354 aa16.65■□□□□ 0.26
PTPRO-209ENST00000543886 MAGEA13PA6NCF6 341 aa16.65■□□□□ 0.26
PTPRO-209ENST00000543886 TMEM202A6NGA9 273 aa16.65■□□□□ 0.26
PTPRO-209ENST00000543886 ANKRD28O15084 1053 aa16.65■□□□□ 0.26
PTPRO-209ENST00000543886 LINGO3P0C6S8 592 aa16.65■□□□□ 0.26
PTPRO-209ENST00000543886 ITPKAP23677 461 aa16.65■□□□□ 0.26
PTPRO-209ENST00000543886 VARSP26640 1264 aaKnown RBP16.65■□□□□ 0.26
PTPRO-209ENST00000543886 ABRQ12979 859 aa16.65■□□□□ 0.26
PTPRO-209ENST00000543886 ZNF234Q14588 700 aa16.65■□□□□ 0.26
PTPRO-209ENST00000543886 RABL3Q5HYI8 236 aa16.65■□□□□ 0.26
PTPRO-209ENST00000543886 CYP2U1Q7Z449 544 aa16.65■□□□□ 0.26
PTPRO-209ENST00000543886 DPP10Q8N608 796 aa16.65■□□□□ 0.26
PTPRO-209ENST00000543886 SELENOMQ8WWX9 145 aa16.65■□□□□ 0.26
PTPRO-209ENST00000543886 FBXL8Q96CD0 374 aa16.65■□□□□ 0.26
PTPRO-209ENST00000543886 BTBD9Q96Q07 612 aa16.65■□□□□ 0.26
PTPRO-209ENST00000543886 KCTD14Q9BQ13 255 aaPredicted RBP16.65■□□□□ 0.26
PTPRO-209ENST00000543886 TRIM8Q9BZR9 551 aa16.65■□□□□ 0.26
PTPRO-209ENST00000543886 VCXQ9H320 206 aa16.65■□□□□ 0.26
PTPRO-209ENST00000543886 MUC13Q9H3R2 512 aa16.65■□□□□ 0.26
PTPRO-209ENST00000543886 ALG2Q9H553 416 aa16.65■□□□□ 0.26
PTPRO-209ENST00000543886 DYRK4Q9NR20 520 aa16.65■□□□□ 0.26
PTPRO-209ENST00000543886 C1orf109Q9NX04 203 aa16.65■□□□□ 0.26
PTPRO-209ENST00000543886 EGFL7Q9UHF1 273 aa16.65■□□□□ 0.26
PTPRO-209ENST00000543886 SCOCQ9UIL1 159 aa16.65■□□□□ 0.26
PTPRO-209ENST00000543886 SLC22A14Q9Y267 594 aa16.65■□□□□ 0.26
PTPRO-209ENST00000543886 COQ6Q9Y2Z9 468 aa16.65■□□□□ 0.26
PTPRO-209ENST00000543886 ZNF839A8K0R7 811 aa16.64■□□□□ 0.25
PTPRO-209ENST00000543886 SPINT1O43278 529 aa16.64■□□□□ 0.25
PTPRO-209ENST00000543886 PDYNP01213 254 aa16.64■□□□□ 0.25
PTPRO-209ENST00000543886 PBLDP30039 288 aaPredicted RBP16.64■□□□□ 0.25
PTPRO-209ENST00000543886 LIPEQ05469 1076 aa16.64■□□□□ 0.25
PTPRO-209ENST00000543886 KCNC3Q14003 757 aa16.64■□□□□ 0.25
PTPRO-209ENST00000543886 INPP5AQ14642 412 aa16.64■□□□□ 0.25
PTPRO-209ENST00000543886 ZXDCQ2QGD7 858 aaPredicted RBP16.64■□□□□ 0.25
PTPRO-209ENST00000543886 LIX1Q8N485 282 aa16.64■□□□□ 0.25
PTPRO-209ENST00000543886 TMEM102Q8N9M5 508 aaPredicted RBP16.64■□□□□ 0.25
PTPRO-209ENST00000543886 TERB1Q8NA31 727 aa16.64■□□□□ 0.25
PTPRO-209ENST00000543886 NUS1Q96E22 293 aa16.64■□□□□ 0.25
PTPRO-209ENST00000543886 MAGEB10Q96LZ2 347 aaPredicted RBP16.64■□□□□ 0.25
PTPRO-209ENST00000543886 DPY30Q9C005 99 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms