RNA–Protein interactions for RNA: ENST00000542698.1

PRKAB1-207, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 1 (best)

Gene PRKAB1, Length 4,019 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-207ENST00000542698 CENPSQ8N2Z9 138 aa8.05□□□□□ -1.12
PRKAB1-207ENST00000542698 HDAC2Q92769 488 aaKnown RBP8.05□□□□□ -1.12
PRKAB1-207ENST00000542698 IGSF8Q969P0 613 aa8.05□□□□□ -1.12
PRKAB1-207ENST00000542698 PTERQ96BW5 349 aa8.05□□□□□ -1.12
PRKAB1-207ENST00000542698 PPCDCQ96CD2 204 aa8.05□□□□□ -1.12
PRKAB1-207ENST00000542698 EBPLQ9BY08 206 aa8.05□□□□□ -1.12
PRKAB1-207ENST00000542698 CXCL16Q9H2A7 254 aa8.05□□□□□ -1.12
PRKAB1-207ENST00000542698 CMTM6Q9NX76 183 aa8.05□□□□□ -1.12
PRKAB1-207ENST00000542698 KLHL28Q9NXS3 571 aa8.05□□□□□ -1.12
PRKAB1-207ENST00000542698 PGAP2Q9UHJ9 254 aa8.05□□□□□ -1.12
PRKAB1-207ENST00000542698 RBMX2Q9Y388 322 aaKnown RBP8.05□□□□□ -1.12
PRKAB1-207ENST00000542698 SEPT4O43236 478 aa8.05□□□□□ -1.12
PRKAB1-207ENST00000542698 DFNA5O60443 496 aa8.05□□□□□ -1.12
PRKAB1-207ENST00000542698 ZNF623O75123 536 aa8.05□□□□□ -1.12
PRKAB1-207ENST00000542698 SLC5A2P31639 672 aa8.05□□□□□ -1.12
PRKAB1-207ENST00000542698 ABHD18Q0P651 414 aa8.05□□□□□ -1.12
PRKAB1-207ENST00000542698 PMS2P3Q13401 168 aa8.05□□□□□ -1.12
PRKAB1-207ENST00000542698 PTGR1Q14914 329 aa8.05□□□□□ -1.12
PRKAB1-207ENST00000542698 GPR33Q49SQ1 333 aa8.05□□□□□ -1.12
PRKAB1-207ENST00000542698 UBXN11Q5T124 520 aa8.05□□□□□ -1.12
PRKAB1-207ENST00000542698 BEND5Q7L4P6 421 aa8.05□□□□□ -1.12
PRKAB1-207ENST00000542698 OR4A15Q8NGL6 344 aa8.05□□□□□ -1.12
PRKAB1-207ENST00000542698 NT5C3BQ969T7 300 aa8.05□□□□□ -1.12
PRKAB1-207ENST00000542698 TADA1Q96BN2 335 aa8.05□□□□□ -1.12
PRKAB1-207ENST00000542698 YME1L1Q96TA2 773 aa8.05□□□□□ -1.12
PRKAB1-207ENST00000542698 MTERF1Q99551 399 aaKnown RBP8.05□□□□□ -1.12
PRKAB1-207ENST00000542698 TNKS2Q9H2K2 1166 aa8.05□□□□□ -1.12
PRKAB1-207ENST00000542698 SLC32A1Q9H598 525 aa8.05□□□□□ -1.12
PRKAB1-207ENST00000542698 ZC4H2Q9NQZ6 224 aa8.05□□□□□ -1.12
PRKAB1-207ENST00000542698 TREX1Q9NSU2 369 aa8.05□□□□□ -1.12
PRKAB1-207ENST00000542698 STMN3Q9NZ72 180 aa8.05□□□□□ -1.12
PRKAB1-207ENST00000542698 TESMINQ9Y4I5 508 aa8.05□□□□□ -1.12
PRKAB1-207ENST00000542698 PCDHB3Q9Y5E6 796 aa8.05□□□□□ -1.12
PRKAB1-207ENST00000542698 PCDHGB3Q9Y5G1 929 aa8.05□□□□□ -1.12
PRKAB1-207ENST00000542698 GPC6Q9Y625 555 aaPredicted RBP8.05□□□□□ -1.12
PRKAB1-207ENST00000542698 MBLAC1A4D2B0 266 aaPredicted RBP8.04□□□□□ -1.12
PRKAB1-207ENST00000542698 PPP6CO00743 305 aa8.04□□□□□ -1.12
PRKAB1-207ENST00000542698 TBX1O43435 398 aa8.04□□□□□ -1.12
PRKAB1-207ENST00000542698 OR1I1O60431 355 aa8.04□□□□□ -1.12
PRKAB1-207ENST00000542698 CCNDBP1O95273 360 aa8.04□□□□□ -1.12
PRKAB1-207ENST00000542698 ALPIP09923 528 aa8.04□□□□□ -1.12
PRKAB1-207ENST00000542698 POLR2EP19388 210 aaKnown RBP8.04□□□□□ -1.12
PRKAB1-207ENST00000542698 GPX3P22352 226 aa8.04□□□□□ -1.12
PRKAB1-207ENST00000542698 DNAJA1P31689 397 aaKnown RBP8.04□□□□□ -1.12
PRKAB1-207ENST00000542698 GSTM5P46439 218 aa8.04□□□□□ -1.12
PRKAB1-207ENST00000542698 PRKAG1P54619 331 aa8.04□□□□□ -1.12
PRKAB1-207ENST00000542698 GRM2Q14416 872 aa8.04□□□□□ -1.12
PRKAB1-207ENST00000542698 USP39Q53GS9 565 aaKnown RBP8.04□□□□□ -1.12
PRKAB1-207ENST00000542698 LRRTM3Q86VH5 581 aa8.04□□□□□ -1.12
PRKAB1-207ENST00000542698 ARHGAP12Q8IWW6 846 aa8.04□□□□□ -1.12
PRKAB1-207ENST00000542698 SLC34A3Q8N130 599 aa8.04□□□□□ -1.12
PRKAB1-207ENST00000542698 CYP4Z2PQ8N1L4 340 aa8.04□□□□□ -1.12
PRKAB1-207ENST00000542698 ERLEC1Q96DZ1 483 aa8.04□□□□□ -1.12
PRKAB1-207ENST00000542698 PYURFQ96I23 114 aa8.04□□□□□ -1.12
PRKAB1-207ENST00000542698 C3orf30Q96M34 536 aa8.04□□□□□ -1.12
PRKAB1-207ENST00000542698 R3HDMLQ9H3Y0 253 aa8.04□□□□□ -1.12
PRKAB1-207ENST00000542698 OSGEPL1Q9H4B0 414 aa8.04□□□□□ -1.12
PRKAB1-207ENST00000542698 RUVBL1Q9Y265 456 aaKnown RBP8.04□□□□□ -1.12
PRKAB1-207ENST00000542698 SLC45A1Q9Y2W3 748 aa8.04□□□□□ -1.12
PRKAB1-207ENST00000542698 DHRS7Q9Y394 339 aa8.04□□□□□ -1.12
PRKAB1-207ENST00000542698 USP3Q9Y6I4 520 aa8.04□□□□□ -1.12
PRKAB1-207ENST00000542698 BRWD3Q6RI45 1802 aa8.04□□□□□ -1.12
PRKAB1-207ENST00000542698 TRIM43BA6NCK2 446 aa8.04□□□□□ -1.12
PRKAB1-207ENST00000542698 FAM25AB3EWG3 89 aa8.04□□□□□ -1.12
PRKAB1-207ENST00000542698 FAM25CB3EWG5 89 aa8.04□□□□□ -1.12
PRKAB1-207ENST00000542698 FAM25GB3EWG6 89 aa8.04□□□□□ -1.12
PRKAB1-207ENST00000542698 EEDO75530 441 aaKnown RBP8.04□□□□□ -1.12
PRKAB1-207ENST00000542698 GNAO1P09471 354 aa8.04□□□□□ -1.12
PRKAB1-207ENST00000542698 ZNF26P17031 533 aaPredicted RBP8.04□□□□□ -1.12
PRKAB1-207ENST00000542698 RPL17P18621 184 aaKnown RBP8.04□□□□□ -1.12
PRKAB1-207ENST00000542698 PSMA1P25786 263 aaKnown RBP8.04□□□□□ -1.12
PRKAB1-207ENST00000542698 IL12RB1P42701 662 aa8.04□□□□□ -1.12
PRKAB1-207ENST00000542698 ARCN1P48444 511 aaKnown RBP8.04□□□□□ -1.12
PRKAB1-207ENST00000542698 TPTEP56180 551 aa8.04□□□□□ -1.12
PRKAB1-207ENST00000542698 ITGA1P56199 1179 aa8.04□□□□□ -1.12
PRKAB1-207ENST00000542698 SMIM11AP58511 58 aa8.04□□□□□ -1.12
PRKAB1-207ENST00000542698 CREB5Q02930 508 aa8.04□□□□□ -1.12
PRKAB1-207ENST00000542698 POM121L1PQ3SYA9 428 aa8.04□□□□□ -1.12
PRKAB1-207ENST00000542698 PDE12Q6L8Q7 609 aaKnown RBP8.04□□□□□ -1.12
PRKAB1-207ENST00000542698 PHACTR4Q8IZ21 702 aa8.04□□□□□ -1.12
PRKAB1-207ENST00000542698 FBXO22Q8NEZ5 403 aa8.04□□□□□ -1.12
PRKAB1-207ENST00000542698 OR52B6Q8NGF0 335 aa8.04□□□□□ -1.12
PRKAB1-207ENST00000542698 SHKBP1Q8TBC3 707 aa8.04□□□□□ -1.12
PRKAB1-207ENST00000542698 ITFG2Q969R8 447 aa8.04□□□□□ -1.12
PRKAB1-207ENST00000542698 PLD4Q96BZ4 506 aa8.04□□□□□ -1.12
PRKAB1-207ENST00000542698 RNFT2Q96EX2 444 aa8.04□□□□□ -1.12
PRKAB1-207ENST00000542698 RPL10LQ96L21 214 aaKnown RBP8.04□□□□□ -1.12
PRKAB1-207ENST00000542698 QRFPRQ96P65 431 aa8.04□□□□□ -1.12
PRKAB1-207ENST00000542698 BBS4Q96RK4 519 aa8.04□□□□□ -1.12
PRKAB1-207ENST00000542698 TCF25Q9BQ70 676 aa8.04□□□□□ -1.12
PRKAB1-207ENST00000542698 ARNT2Q9HBZ2 717 aa8.04□□□□□ -1.12
PRKAB1-207ENST00000542698 HMX1Q9NP08 348 aaPredicted RBP8.04□□□□□ -1.12
PRKAB1-207ENST00000542698 TMLHEQ9NVH6 421 aa8.04□□□□□ -1.12
PRKAB1-207ENST00000542698 SSR3Q9UNL2 185 aa8.04□□□□□ -1.12
PRKAB1-207ENST00000542698 SATB2Q9UPW6 733 aa8.04□□□□□ -1.12
PRKAB1-207ENST00000542698 CEPT1Q9Y6K0 416 aa8.04□□□□□ -1.12
PRKAB1-207ENST00000542698 SLX4Q8IY92 1834 aa8.04□□□□□ -1.12
PRKAB1-207ENST00000542698 ACOT8O14734 319 aa8.04□□□□□ -1.12
PRKAB1-207ENST00000542698 IDH3BO43837 385 aa8.04□□□□□ -1.12
PRKAB1-207ENST00000542698 CCNKO75909 580 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms