RNA–Protein interactions for RNA: ENST00000541576.5

THBS3-210, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 3,200 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-210ENST00000541576 C1QTNF3Q9BXJ4 246 aa8.49□□□□□ -1.05
THBS3-210ENST00000541576 STN1Q9H668 368 aaKnown RBP8.49□□□□□ -1.05
THBS3-210ENST00000541576 RDH14Q9HBH5 336 aa8.49□□□□□ -1.05
THBS3-210ENST00000541576 PHPT1Q9NRX4 125 aaPredicted RBP8.49□□□□□ -1.05
THBS3-210ENST00000541576 A0A1B0GTL3 188 aa8.49□□□□□ -1.05
THBS3-210ENST00000541576 KANSL1LA0AUZ9 987 aa8.49□□□□□ -1.05
THBS3-210ENST00000541576 SLC5A10A0PJK1 596 aa8.49□□□□□ -1.05
THBS3-210ENST00000541576 LRRC72A6NJI9 287 aa8.49□□□□□ -1.05
THBS3-210ENST00000541576 SLCO1B7G3V0H7 640 aa8.49□□□□□ -1.05
THBS3-210ENST00000541576 FCHO1O14526 889 aa8.49□□□□□ -1.05
THBS3-210ENST00000541576 SLC31A1O15431 190 aa8.49□□□□□ -1.05
THBS3-210ENST00000541576 PREPP48147 710 aa8.49□□□□□ -1.05
THBS3-210ENST00000541576 STARD6P59095 220 aa8.49□□□□□ -1.05
THBS3-210ENST00000541576 SH3BP2P78314 561 aa8.49□□□□□ -1.05
THBS3-210ENST00000541576 SP140Q13342 867 aa8.49□□□□□ -1.05
THBS3-210ENST00000541576 GRAMD1BQ3KR37 738 aa8.49□□□□□ -1.05
THBS3-210ENST00000541576 UBE2R2Q712K3 238 aaPredicted RBP8.49□□□□□ -1.05
THBS3-210ENST00000541576 LILRA3Q8N6C8 439 aaPredicted RBP8.49□□□□□ -1.05
THBS3-210ENST00000541576 SLC26A7Q8TE54 656 aa8.49□□□□□ -1.05
THBS3-210ENST00000541576 LINC00615Q96LM1 132 aaPredicted RBP8.49□□□□□ -1.05
THBS3-210ENST00000541576 PPP1R36Q96LQ0 422 aa8.49□□□□□ -1.05
THBS3-210ENST00000541576 SLC12A9Q9BXP2 914 aa8.49□□□□□ -1.05
THBS3-210ENST00000541576 TRIM54Q9BYV2 358 aa8.49□□□□□ -1.05
THBS3-210ENST00000541576 WDR55Q9H6Y2 383 aaPredicted RBP8.49□□□□□ -1.05
THBS3-210ENST00000541576 ITM2CQ9NQX7 267 aa8.49□□□□□ -1.05
THBS3-210ENST00000541576 DNAJC28Q9NX36 388 aa8.49□□□□□ -1.05
THBS3-210ENST00000541576 TNPO3Q9Y5L0 923 aaKnown RBP8.49□□□□□ -1.05
THBS3-210ENST00000541576 PABPN1LA6NDY0 278 aaKnown RBP8.48□□□□□ -1.05
THBS3-210ENST00000541576 FAM170BA6NMN3 283 aa8.48□□□□□ -1.05
THBS3-210ENST00000541576 HDAC3O15379 428 aa8.48□□□□□ -1.05
THBS3-210ENST00000541576 GSC2O15499 205 aa8.48□□□□□ -1.05
THBS3-210ENST00000541576 POP7O75817 140 aaKnown RBP8.48□□□□□ -1.05
THBS3-210ENST00000541576 ENO2P09104 434 aaPredicted RBP8.48□□□□□ -1.05
THBS3-210ENST00000541576 GSTM1P09488 218 aa8.48□□□□□ -1.05
THBS3-210ENST00000541576 HIST1H2AGP0C0S8 130 aaPredicted RBP8.48□□□□□ -1.05
THBS3-210ENST00000541576 HIST1H2ADP20671 130 aa8.48□□□□□ -1.05
THBS3-210ENST00000541576 RPIAP49247 311 aa8.48□□□□□ -1.05
THBS3-210ENST00000541576 GSTM4Q03013 218 aa8.48□□□□□ -1.05
THBS3-210ENST00000541576 CLCQ05315 142 aa8.48□□□□□ -1.05
THBS3-210ENST00000541576 LCP2Q13094 533 aa8.48□□□□□ -1.05
THBS3-210ENST00000541576 DYNC1I2Q13409 638 aaKnown RBP8.48□□□□□ -1.05
THBS3-210ENST00000541576 MYBPC3Q14896 1274 aa8.48□□□□□ -1.05
THBS3-210ENST00000541576 TMEM31Q5JXX7 168 aa8.48□□□□□ -1.05
THBS3-210ENST00000541576 CFAP206Q8IYR0 622 aa8.48□□□□□ -1.05
THBS3-210ENST00000541576 SIX5Q8N196 739 aa8.48□□□□□ -1.05
THBS3-210ENST00000541576 AFAP1L2Q8N4X5 818 aa8.48□□□□□ -1.05
THBS3-210ENST00000541576 POU5F2Q8N7G0 328 aa8.48□□□□□ -1.05
THBS3-210ENST00000541576 OR2T34Q8NGX1 318 aa8.48□□□□□ -1.05
THBS3-210ENST00000541576 TRPC4APQ8TEL6 797 aa8.48□□□□□ -1.05
THBS3-210ENST00000541576 ASB12Q8WXK4 309 aa8.48□□□□□ -1.05
THBS3-210ENST00000541576 HIST1H2AHQ96KK5 128 aa8.48□□□□□ -1.05
THBS3-210ENST00000541576 OR52B2Q96RD2 323 aa8.48□□□□□ -1.05
THBS3-210ENST00000541576 HIST1H2AJQ99878 128 aa8.48□□□□□ -1.05
THBS3-210ENST00000541576 H2AFJQ9BTM1 129 aa8.48□□□□□ -1.05
THBS3-210ENST00000541576 NUF2Q9BZD4 464 aa8.48□□□□□ -1.05
THBS3-210ENST00000541576 FOXQ1Q9C009 403 aa8.48□□□□□ -1.05
THBS3-210ENST00000541576 PARVBQ9HBI1 364 aa8.48□□□□□ -1.05
THBS3-210ENST00000541576 SGK2Q9HBY8 427 aa8.48□□□□□ -1.05
THBS3-210ENST00000541576 ZBTB26Q9HCK0 441 aa8.48□□□□□ -1.05
THBS3-210ENST00000541576 FZD3Q9NPG1 666 aa8.48□□□□□ -1.05
THBS3-210ENST00000541576 SEMA4BQ9NPR2 832 aaPredicted RBP8.48□□□□□ -1.05
THBS3-210ENST00000541576 USP36Q9P275 1121 aaKnown RBP8.48□□□□□ -1.05
THBS3-210ENST00000541576 GULP1Q9UBP9 304 aa8.48□□□□□ -1.05
THBS3-210ENST00000541576 VTI1BQ9UEU0 232 aa8.48□□□□□ -1.05
THBS3-210ENST00000541576 EBF1Q9UH73 591 aa8.48□□□□□ -1.05
THBS3-210ENST00000541576 EIF2B4Q9UI10 523 aaKnown RBP8.48□□□□□ -1.05
THBS3-210ENST00000541576 PCTPQ9UKL6 214 aa8.48□□□□□ -1.05
THBS3-210ENST00000541576 PDE10AQ9Y233 779 aa8.48□□□□□ -1.05
THBS3-210ENST00000541576 C17orf113A0A1B0GUU1 675 aa8.48□□□□□ -1.05
THBS3-210ENST00000541576 GFYI3L273 518 aa8.48□□□□□ -1.05
THBS3-210ENST00000541576 SLC16A5O15375 505 aa8.48□□□□□ -1.05
THBS3-210ENST00000541576 CCDC22O60826 627 aa8.48□□□□□ -1.05
THBS3-210ENST00000541576 PDE5AO76074 875 aa8.48□□□□□ -1.05
THBS3-210ENST00000541576 MYCLP1P12525 358 aaPredicted RBP8.48□□□□□ -1.05
THBS3-210ENST00000541576 CYP2A7P20853 494 aa8.48□□□□□ -1.05
THBS3-210ENST00000541576 IGFALSP35858 605 aa8.48□□□□□ -1.05
THBS3-210ENST00000541576 FZD5Q13467 585 aa8.48□□□□□ -1.05
THBS3-210ENST00000541576 GAS6Q14393 721 aa8.48□□□□□ -1.05
THBS3-210ENST00000541576 PCBP2Q15366 365 aaKnown RBP eCLIP8.48□□□□□ -1.05
THBS3-210ENST00000541576 PLA2G4EQ3MJ16 856 aa8.48□□□□□ -1.05
THBS3-210ENST00000541576 ZNF658BQ4V348 819 aaPredicted RBP8.48□□□□□ -1.05
THBS3-210ENST00000541576 SULT1C3Q6IMI6 304 aa8.48□□□□□ -1.05
THBS3-210ENST00000541576 PAOXQ6QHF9 649 aa8.48□□□□□ -1.05
THBS3-210ENST00000541576 TRIM69Q86WT6 500 aa8.48□□□□□ -1.05
THBS3-210ENST00000541576 SLC22A15Q8IZD6 547 aa8.48□□□□□ -1.05
THBS3-210ENST00000541576 TSTD1Q8NFU3 115 aa8.48□□□□□ -1.05
THBS3-210ENST00000541576 HM13Q8TCT9 377 aa8.48□□□□□ -1.05
THBS3-210ENST00000541576 FOXJ1Q92949 421 aa8.48□□□□□ -1.05
THBS3-210ENST00000541576 FAR2Q96K12 515 aa8.48□□□□□ -1.05
THBS3-210ENST00000541576 NELL2Q99435 816 aa8.48□□□□□ -1.05
THBS3-210ENST00000541576 MYOCQ99972 504 aa8.48□□□□□ -1.05
THBS3-210ENST00000541576 BTBD10Q9BSF8 475 aa8.48□□□□□ -1.05
THBS3-210ENST00000541576 NDE1Q9NXR1 346 aa8.48□□□□□ -1.05
THBS3-210ENST00000541576 ARL15Q9NXU5 204 aa8.48□□□□□ -1.05
THBS3-210ENST00000541576 WWOXQ9NZC7 414 aa8.48□□□□□ -1.05
THBS3-210ENST00000541576 PTBP2Q9UKA9 531 aaKnown RBP8.48□□□□□ -1.05
THBS3-210ENST00000541576 FIS1Q9Y3D6 152 aa8.48□□□□□ -1.05
THBS3-210ENST00000541576 GOLGA8QA0A0J9YX86 632 aa8.48□□□□□ -1.05
THBS3-210ENST00000541576 GOLGA8OA6NCC3 632 aa8.48□□□□□ -1.05
THBS3-210ENST00000541576 MGAT4DA6NG13 374 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms