RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 SLC40A1Q9NP59 571 aa4.49□□□□□ -1.69
SNHG1-214ENST00000540865 PLCB1Q9NQ66 1216 aa4.49□□□□□ -1.69
SNHG1-214ENST00000540865 POT1Q9NUX5 634 aa4.49□□□□□ -1.69
SNHG1-214ENST00000540865 ZNF624Q9P2J8 865 aaPredicted RBP4.49□□□□□ -1.69
SNHG1-214ENST00000540865 CNOT6Q9ULM6 557 aaKnown RBP4.49□□□□□ -1.69
SNHG1-214ENST00000540865 PPIL1Q9Y3C6 166 aa4.49□□□□□ -1.69
SNHG1-214ENST00000540865 PRKAB1Q9Y478 270 aa4.49□□□□□ -1.69
SNHG1-214ENST00000540865 PCYT1BQ9Y5K3 369 aaPredicted RBP4.49□□□□□ -1.69
SNHG1-214ENST00000540865 TNRC6AQ8NDV7 1962 aaKnown RBP4.49□□□□□ -1.69
SNHG1-214ENST00000540865 CHD5Q8TDI0 1954 aa4.49□□□□□ -1.69
SNHG1-214ENST00000540865 CSPG4Q6UVK1 2322 aa4.48□□□□□ -1.69
SNHG1-214ENST00000540865 TRBV23-1A0A0A0MS06 115 aa4.48□□□□□ -1.69
SNHG1-214ENST00000540865 GTPBP10A4D1E9 387 aaKnown RBP4.48□□□□□ -1.69
SNHG1-214ENST00000540865 FOXN3O00409 490 aaPredicted RBP4.48□□□□□ -1.69
SNHG1-214ENST00000540865 PEX12O00623 359 aa4.48□□□□□ -1.69
SNHG1-214ENST00000540865 PCDH17O14917 1159 aa4.48□□□□□ -1.69
SNHG1-214ENST00000540865 GRID2O43424 1007 aa4.48□□□□□ -1.69
SNHG1-214ENST00000540865 CREB3O43889 395 aa4.48□□□□□ -1.69
SNHG1-214ENST00000540865 NUAK1O60285 661 aa4.48□□□□□ -1.69
SNHG1-214ENST00000540865 JRKO75564 520 aa4.48□□□□□ -1.69
SNHG1-214ENST00000540865 ZNF202O95125 648 aa4.48□□□□□ -1.69
SNHG1-214ENST00000540865 SMC2O95347 1197 aa4.48□□□□□ -1.69
SNHG1-214ENST00000540865 EBLN1P0CF75 366 aa4.48□□□□□ -1.69
SNHG1-214ENST00000540865 CYP11B1P15538 503 aa4.48□□□□□ -1.69
SNHG1-214ENST00000540865 ZNF30P17039 623 aa4.48□□□□□ -1.69
SNHG1-214ENST00000540865 SLC9A1P19634 815 aa4.48□□□□□ -1.69
SNHG1-214ENST00000540865 TNFAIP3P21580 790 aa4.48□□□□□ -1.69
SNHG1-214ENST00000540865 OTX2P32243 289 aa4.48□□□□□ -1.69
SNHG1-214ENST00000540865 RFC1P35251 1148 aaPredicted RBP4.48□□□□□ -1.69
SNHG1-214ENST00000540865 RORAP35398 523 aa4.48□□□□□ -1.69
SNHG1-214ENST00000540865 HSPA9P38646 679 aaKnown RBP4.48□□□□□ -1.69
SNHG1-214ENST00000540865 ARCN1P48444 511 aaKnown RBP4.48□□□□□ -1.69
SNHG1-214ENST00000540865 AIF1P55008 147 aa4.48□□□□□ -1.69
SNHG1-214ENST00000540865 HSD11B2P80365 405 aa4.48□□□□□ -1.69
SNHG1-214ENST00000540865 TLE4Q04727 773 aa4.48□□□□□ -1.69
SNHG1-214ENST00000540865 IL10RBQ08334 325 aa4.48□□□□□ -1.69
SNHG1-214ENST00000540865 MAP4K2Q12851 820 aa4.48□□□□□ -1.69
SNHG1-214ENST00000540865 CDC16Q13042 620 aa4.48□□□□□ -1.69
SNHG1-214ENST00000540865 PNOCQ13519 176 aa4.48□□□□□ -1.69
SNHG1-214ENST00000540865 GPR18Q14330 331 aa4.48□□□□□ -1.69
SNHG1-214ENST00000540865 SSPNQ14714 243 aa4.48□□□□□ -1.69
SNHG1-214ENST00000540865 ZNF169Q14929 603 aaPredicted RBP4.48□□□□□ -1.69
SNHG1-214ENST00000540865 NCF4Q15080 339 aa4.48□□□□□ -1.69
SNHG1-214ENST00000540865 MLANAQ16655 118 aa4.48□□□□□ -1.69
SNHG1-214ENST00000540865 C2CD6Q53TS8 623 aa4.48□□□□□ -1.69
SNHG1-214ENST00000540865 TMTC4Q5T4D3 741 aa4.48□□□□□ -1.69
SNHG1-214ENST00000540865 AGAP9Q5VTM2 703 aa4.48□□□□□ -1.69
SNHG1-214ENST00000540865 LCN10Q6JVE6 187 aa4.48□□□□□ -1.69
SNHG1-214ENST00000540865 TTI2Q6NXR4 508 aa4.48□□□□□ -1.69
SNHG1-214ENST00000540865 KLHL35Q6PF15 583 aa4.48□□□□□ -1.69
SNHG1-214ENST00000540865 FAM198BQ6UWH4 519 aa4.48□□□□□ -1.69
SNHG1-214ENST00000540865 IGFL2Q6UWQ7 119 aa4.48□□□□□ -1.69
SNHG1-214ENST00000540865 ABRAXAS1Q6UWZ7 409 aa4.48□□□□□ -1.69
SNHG1-214ENST00000540865 WASH2PQ6VEQ5 465 aa4.48□□□□□ -1.69
SNHG1-214ENST00000540865 TRIM72Q6ZMU5 477 aa4.48□□□□□ -1.69
SNHG1-214ENST00000540865 GBP6Q6ZN66 633 aa4.48□□□□□ -1.69
SNHG1-214ENST00000540865 RFLNAQ6ZTI6 216 aa4.48□□□□□ -1.69
SNHG1-214ENST00000540865 TSPAN33Q86UF1 283 aa4.48□□□□□ -1.69
SNHG1-214ENST00000540865 FAM71AQ8IYT1 594 aa4.48□□□□□ -1.69
SNHG1-214ENST00000540865 NDUFAF2Q8N183 169 aa4.48□□□□□ -1.69
SNHG1-214ENST00000540865 CARFQ8N187 725 aa4.48□□□□□ -1.69
SNHG1-214ENST00000540865 PYROXD2Q8N2H3 581 aa4.48□□□□□ -1.69
SNHG1-214ENST00000540865 BCORP1Q8N888 145 aa4.48□□□□□ -1.69
SNHG1-214ENST00000540865 GPT2Q8TD30 523 aa4.48□□□□□ -1.69
SNHG1-214ENST00000540865 FAM172AQ8WUF8 416 aa4.48□□□□□ -1.69
SNHG1-214ENST00000540865 CHTF18Q8WVB6 975 aa4.48□□□□□ -1.69
SNHG1-214ENST00000540865 DIO2Q92813 273 aa4.48□□□□□ -1.69
SNHG1-214ENST00000540865 ZNF501Q96CX3 271 aaPredicted RBP4.48□□□□□ -1.69
SNHG1-214ENST00000540865 CELF6Q96J87 481 aaKnown RBP4.48□□□□□ -1.69
SNHG1-214ENST00000540865 ZNF599Q96NL3 588 aa4.48□□□□□ -1.69
SNHG1-214ENST00000540865 NUDCD1Q96RS6 583 aa4.48□□□□□ -1.69
SNHG1-214ENST00000540865 AGAP2Q99490 1192 aa4.48□□□□□ -1.69
SNHG1-214ENST00000540865 CRACR2AQ9BSW2 395 aa4.48□□□□□ -1.69
SNHG1-214ENST00000540865 RIOK2Q9BVS4 552 aaKnown RBP4.48□□□□□ -1.69
SNHG1-214ENST00000540865 SLC39A8Q9C0K1 460 aa4.48□□□□□ -1.69
SNHG1-214ENST00000540865 SCAND2PQ9GZW5 306 aaPredicted RBP4.48□□□□□ -1.69
SNHG1-214ENST00000540865 CARD9Q9H257 536 aa4.48□□□□□ -1.69
SNHG1-214ENST00000540865 ZBTB20Q9HC78 741 aaPredicted RBP4.48□□□□□ -1.69
SNHG1-214ENST00000540865 OLAHQ9NV23 265 aa4.48□□□□□ -1.69
SNHG1-214ENST00000540865 CD84Q9UIB8 345 aa4.48□□□□□ -1.69
SNHG1-214ENST00000540865 DNPEPQ9ULA0 475 aa4.48□□□□□ -1.69
SNHG1-214ENST00000540865 PADI2Q9Y2J8 665 aa4.48□□□□□ -1.69
SNHG1-214ENST00000540865 SIK3Q9Y2K2 1263 aa4.48□□□□□ -1.69
SNHG1-214ENST00000540865 TRAF6Q9Y4K3 522 aa4.48□□□□□ -1.69
SNHG1-214ENST00000540865 ATRQ13535 2644 aa4.48□□□□□ -1.69
SNHG1-214ENST00000540865 NSD1Q96L73 2696 aaPredicted RBP4.47□□□□□ -1.69
SNHG1-214ENST00000540865 TRGV8A0A0C4DH27 118 aa4.47□□□□□ -1.69
SNHG1-214ENST00000540865 UBA6A0AVT1 1052 aaPredicted RBP4.47□□□□□ -1.69
SNHG1-214ENST00000540865 BICDL2A1A5D9 508 aa4.47□□□□□ -1.69
SNHG1-214ENST00000540865 TLCD2A6NGC4 264 aa4.47□□□□□ -1.69
SNHG1-214ENST00000540865 TMEM200CA6NKL6 621 aa4.47□□□□□ -1.69
SNHG1-214ENST00000540865 PDZK1P1A8MUH7 402 aa4.47□□□□□ -1.69
SNHG1-214ENST00000540865 NUDT19A8MXV4 375 aa4.47□□□□□ -1.69
SNHG1-214ENST00000540865 GPR89AB7ZAQ6 455 aa4.47□□□□□ -1.69
SNHG1-214ENST00000540865 C9J4A7 227 aa4.47□□□□□ -1.69
SNHG1-214ENST00000540865 CCL21O00585 134 aa4.47□□□□□ -1.69
SNHG1-214ENST00000540865 VEGFDO43915 354 aa4.47□□□□□ -1.69
SNHG1-214ENST00000540865 NPHS1O60500 1241 aa4.47□□□□□ -1.69
SNHG1-214ENST00000540865 KLF7O75840 302 aaPredicted RBP4.47□□□□□ -1.69
SNHG1-214ENST00000540865 MTA2O94776 668 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms