RNA–Protein interactions for RNA: ENST00000540709.1

MDM2-227, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-227ENST00000540709 A0A1W2PN81 502 aa3.13□□□□□ -1.91
MDM2-227ENST00000540709 A0A1W2PR77 199 aa3.13□□□□□ -1.91
MDM2-227ENST00000540709 PGPEP1LA6NFU8 196 aa3.13□□□□□ -1.91
MDM2-227ENST00000540709 B4DLN1 442 aa3.13□□□□□ -1.91
MDM2-227ENST00000540709 USO1O60763 962 aaKnown RBP3.13□□□□□ -1.91
MDM2-227ENST00000540709 GPIP06744 558 aa3.13□□□□□ -1.91
MDM2-227ENST00000540709 VPREB1P12018 145 aa3.13□□□□□ -1.91
MDM2-227ENST00000540709 CA6P23280 308 aa3.13□□□□□ -1.91
MDM2-227ENST00000540709 SHC1P29353 583 aa3.13□□□□□ -1.91
MDM2-227ENST00000540709 CHRNA7P36544 502 aa3.13□□□□□ -1.91
MDM2-227ENST00000540709 MMP12P39900 470 aa3.13□□□□□ -1.91
MDM2-227ENST00000540709 GARSP41250 739 aaKnown RBP3.13□□□□□ -1.91
MDM2-227ENST00000540709 MRPL12P52815 198 aaKnown RBP3.13□□□□□ -1.91
MDM2-227ENST00000540709 DDX10Q13206 875 aaKnown RBP3.13□□□□□ -1.91
MDM2-227ENST00000540709 FIGLAQ6QHK4 219 aa3.13□□□□□ -1.91
MDM2-227ENST00000540709 IL27RAQ6UWB1 636 aa3.13□□□□□ -1.91
MDM2-227ENST00000540709 LDB1Q86U70 411 aaPredicted RBP3.13□□□□□ -1.91
MDM2-227ENST00000540709 ADGRF2Q8IZF7 708 aa3.13□□□□□ -1.91
MDM2-227ENST00000540709 AFAP1Q8N556 730 aa3.13□□□□□ -1.91
MDM2-227ENST00000540709 DCLK2Q8N568 766 aa3.13□□□□□ -1.91
MDM2-227ENST00000540709 VANGL1Q8TAA9 524 aaPredicted RBP3.13□□□□□ -1.91
MDM2-227ENST00000540709 ZNRF4Q8WWF5 429 aa3.13□□□□□ -1.91
MDM2-227ENST00000540709 IRGQQ8WZA9 623 aa3.13□□□□□ -1.91
MDM2-227ENST00000540709 POLR3GLQ9BT43 218 aa3.13□□□□□ -1.91
MDM2-227ENST00000540709 ATP13A3Q9H7F0 1226 aa3.13□□□□□ -1.91
MDM2-227ENST00000540709 TBC1D17Q9HA65 648 aa3.13□□□□□ -1.91
MDM2-227ENST00000540709 SPHK2Q9NRA0 654 aa3.13□□□□□ -1.91
MDM2-227ENST00000540709 ERAP1Q9NZ08 941 aa3.13□□□□□ -1.91
MDM2-227ENST00000540709 NUDT4Q9NZJ9 180 aa3.13□□□□□ -1.91
MDM2-227ENST00000540709 ZNF69Q9UC07 566 aa3.13□□□□□ -1.91
MDM2-227ENST00000540709 F5H0A9 414 aaPredicted RBP3.12□□□□□ -1.91
MDM2-227ENST00000540709 GJA1P17302 382 aa3.12□□□□□ -1.91
MDM2-227ENST00000540709 TNFAIP3P21580 790 aa3.12□□□□□ -1.91
MDM2-227ENST00000540709 HNF4AP41235 474 aa3.12□□□□□ -1.91
MDM2-227ENST00000540709 MATR3P43243 847 aaKnown RBP eCLIP3.12□□□□□ -1.91
MDM2-227ENST00000540709 LBX1P52954 281 aa3.12□□□□□ -1.91
MDM2-227ENST00000540709 PAX9P55771 341 aa3.12□□□□□ -1.91
MDM2-227ENST00000540709 B3GALT5-AS1P59052 145 aa3.12□□□□□ -1.91
MDM2-227ENST00000540709 RAPSNQ13702 412 aa3.12□□□□□ -1.91
MDM2-227ENST00000540709 IRF3Q14653 427 aa3.12□□□□□ -1.91
MDM2-227ENST00000540709 TAF1BQ53T94 588 aaPredicted RBP3.12□□□□□ -1.91
MDM2-227ENST00000540709 IGSF11Q5DX21 431 aa3.12□□□□□ -1.91
MDM2-227ENST00000540709 C20orf194Q5TEA3 1177 aa3.12□□□□□ -1.91
MDM2-227ENST00000540709 PAQR6Q6TCH4 344 aa3.12□□□□□ -1.91
MDM2-227ENST00000540709 HAUS6Q7Z4H7 955 aa3.12□□□□□ -1.91
MDM2-227ENST00000540709 MAATS1Q7Z4T9 603 aa3.12□□□□□ -1.91
MDM2-227ENST00000540709 RTN4RL2Q86UN3 420 aa3.12□□□□□ -1.91
MDM2-227ENST00000540709 LMNTD2Q8IXW0 634 aa3.12□□□□□ -1.91
MDM2-227ENST00000540709 ARHGAP24Q8N264 748 aa3.12□□□□□ -1.91
MDM2-227ENST00000540709 TRIML1Q8N9V2 468 aa3.12□□□□□ -1.91
MDM2-227ENST00000540709 TEX19Q8NA77 164 aa3.12□□□□□ -1.91
MDM2-227ENST00000540709 GPRC5AQ8NFJ5 357 aa3.12□□□□□ -1.91
MDM2-227ENST00000540709 DYRK2Q92630 601 aa3.12□□□□□ -1.91
MDM2-227ENST00000540709 CENPTQ96BT3 561 aa3.12□□□□□ -1.91
MDM2-227ENST00000540709 MPP4Q96JB8 637 aa3.12□□□□□ -1.91
MDM2-227ENST00000540709 USP28Q96RU2 1077 aa3.12□□□□□ -1.91
MDM2-227ENST00000540709 LMF2Q9BU23 707 aaKnown RBP3.12□□□□□ -1.91
MDM2-227ENST00000540709 LRRC61Q9BV99 259 aa3.12□□□□□ -1.91
MDM2-227ENST00000540709 PPIL3Q9H2H8 161 aaKnown RBP3.12□□□□□ -1.91
MDM2-227ENST00000540709 KCNK15Q9H427 330 aa3.12□□□□□ -1.91
MDM2-227ENST00000540709 PPANQ9NQ55 473 aaKnown RBP3.12□□□□□ -1.91
MDM2-227ENST00000540709 SLC7A10Q9NS82 523 aa3.12□□□□□ -1.91
MDM2-227ENST00000540709 PANK4Q9NVE7 773 aa3.12□□□□□ -1.91
MDM2-227ENST00000540709 ZNF215Q9UL58 517 aaPredicted RBP3.12□□□□□ -1.91
MDM2-227ENST00000540709 MTUS1Q9ULD2 1270 aa3.12□□□□□ -1.91
MDM2-227ENST00000540709 PLAGL1Q9UM63 463 aa3.12□□□□□ -1.91
MDM2-227ENST00000540709 SERINC4A6NH21 518 aa3.11□□□□□ -1.91
MDM2-227ENST00000540709 HEPACAM2A8MVW5 462 aa3.11□□□□□ -1.91
MDM2-227ENST00000540709 CTDSP2O14595 271 aa3.11□□□□□ -1.91
MDM2-227ENST00000540709 GATA2P23769 480 aaPredicted RBP3.11□□□□□ -1.91
MDM2-227ENST00000540709 HOXC13P31276 330 aa3.11□□□□□ -1.91
MDM2-227ENST00000540709 OPRL1P41146 370 aa3.11□□□□□ -1.91
MDM2-227ENST00000540709 GSDMDP57764 484 aa3.11□□□□□ -1.91
MDM2-227ENST00000540709 HERV-K104P61576 105 aa3.11□□□□□ -1.91
MDM2-227ENST00000540709 C2CD6Q53TS8 623 aa3.11□□□□□ -1.91
MDM2-227ENST00000540709 TMPRSS11FQ6ZWK6 438 aa3.11□□□□□ -1.91
MDM2-227ENST00000540709 RSRC2Q7L4I2 434 aaKnown RBP3.11□□□□□ -1.91
MDM2-227ENST00000540709 KIRREL3Q8IZU9 778 aa3.11□□□□□ -1.91
MDM2-227ENST00000540709 OR5AP2Q8NGF4 316 aa3.11□□□□□ -1.91
MDM2-227ENST00000540709 ZNF519Q8TB69 540 aa3.11□□□□□ -1.91
MDM2-227ENST00000540709 SMAP2Q8WU79 429 aaPredicted RBP3.11□□□□□ -1.91
MDM2-227ENST00000540709 AZIN2Q96A70 460 aa3.11□□□□□ -1.91
MDM2-227ENST00000540709 LRRC59Q96AG4 307 aaKnown RBP3.11□□□□□ -1.91
MDM2-227ENST00000540709 CCDC34Q96HJ3 373 aa3.11□□□□□ -1.91
MDM2-227ENST00000540709 NECTIN4Q96NY8 510 aa3.11□□□□□ -1.91
MDM2-227ENST00000540709 CDRT15Q96T59 188 aa3.11□□□□□ -1.91
MDM2-227ENST00000540709 GPATCH1Q9BRR8 931 aaKnown RBP3.11□□□□□ -1.91
MDM2-227ENST00000540709 MAK16Q9BXY0 300 aaKnown RBP3.11□□□□□ -1.91
MDM2-227ENST00000540709 SPATC1LQ9H0A9 340 aa3.11□□□□□ -1.91
MDM2-227ENST00000540709 ARRDC1-AS1Q9H2J1 176 aa3.11□□□□□ -1.91
MDM2-227ENST00000540709 B3GAT1Q9P2W7 334 aa3.11□□□□□ -1.91
MDM2-227ENST00000540709 DAPK2Q9UIK4 370 aa3.11□□□□□ -1.91
MDM2-227ENST00000540709 TUBE1Q9UJT0 475 aa3.11□□□□□ -1.91
MDM2-227ENST00000540709 TNNQ9UQP3 1299 aa3.11□□□□□ -1.91
MDM2-227ENST00000540709 ZNF148Q9UQR1 794 aa3.11□□□□□ -1.91
MDM2-227ENST00000540709 LAS1LQ9Y4W2 734 aaKnown RBP3.11□□□□□ -1.91
MDM2-227ENST00000540709 LNP1A1A4G5 178 aa3.1□□□□□ -1.91
MDM2-227ENST00000540709 MSGN1A6NI15 193 aa3.1□□□□□ -1.91
MDM2-227ENST00000540709 KPNA7A9QM74 516 aa3.1□□□□□ -1.91
MDM2-227ENST00000540709 MEIS2O14770 477 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms