RNA–Protein interactions for RNA: ENST00000540539.5

CLIP1-214, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2 BASIC

Gene CLIP1, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-214ENST00000540539 CPA5Q8WXQ8 436 aa9.28□□□□□ -0.92
CLIP1-214ENST00000540539 AP2M1Q96CW1 435 aa9.28□□□□□ -0.92
CLIP1-214ENST00000540539 C19orf60Q96EN9 201 aa9.28□□□□□ -0.92
CLIP1-214ENST00000540539 ZDHHC12Q96GR4 267 aa9.28□□□□□ -0.92
CLIP1-214ENST00000540539 PAWRQ96IZ0 340 aaKnown RBP9.28□□□□□ -0.92
CLIP1-214ENST00000540539 CMTM3Q96MX0 182 aa9.28□□□□□ -0.92
CLIP1-214ENST00000540539 MBOAT4Q96T53 435 aa9.28□□□□□ -0.92
CLIP1-214ENST00000540539 SLC30A3Q99726 388 aa9.28□□□□□ -0.92
CLIP1-214ENST00000540539 TMEM47Q9BQJ4 181 aa9.28□□□□□ -0.92
CLIP1-214ENST00000540539 FTHL17Q9BXU8 183 aa9.28□□□□□ -0.92
CLIP1-214ENST00000540539 ZNF768Q9H5H4 540 aaKnown RBP9.28□□□□□ -0.92
CLIP1-214ENST00000540539 MCUBQ9NWR8 336 aa9.28□□□□□ -0.92
CLIP1-214ENST00000540539 KCMF1Q9P0J7 381 aa9.28□□□□□ -0.92
CLIP1-214ENST00000540539 DOCK1Q14185 1865 aa9.28□□□□□ -0.92
CLIP1-214ENST00000540539 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.28□□□□□ -0.92
CLIP1-214ENST00000540539 MFSD2BA6NFX1 497 aa9.28□□□□□ -0.92
CLIP1-214ENST00000540539 ARGFXA6NJG6 315 aa9.28□□□□□ -0.92
CLIP1-214ENST00000540539 ARPC2O15144 300 aa9.28□□□□□ -0.92
CLIP1-214ENST00000540539 INPP4BO15327 924 aa9.28□□□□□ -0.92
CLIP1-214ENST00000540539 PRMT3O60678 531 aa9.28□□□□□ -0.92
CLIP1-214ENST00000540539 POP7O75817 140 aaKnown RBP9.28□□□□□ -0.92
CLIP1-214ENST00000540539 IPO13O94829 963 aaKnown RBP9.28□□□□□ -0.92
CLIP1-214ENST00000540539 RHOBTB1O94844 696 aa9.28□□□□□ -0.92
CLIP1-214ENST00000540539 KLK3P07288 261 aaPredicted RBP9.28□□□□□ -0.92
CLIP1-214ENST00000540539 UNGP13051 313 aaPredicted RBP9.28□□□□□ -0.92
CLIP1-214ENST00000540539 TFEBP19484 476 aa9.28□□□□□ -0.92
CLIP1-214ENST00000540539 AZGP1P25311 298 aaKnown RBP9.28□□□□□ -0.92
CLIP1-214ENST00000540539 CDKN2BP42772 138 aa9.28□□□□□ -0.92
CLIP1-214ENST00000540539 ISL1P61371 349 aa9.28□□□□□ -0.92
CLIP1-214ENST00000540539 CSNK2BP67870 215 aa9.28□□□□□ -0.92
CLIP1-214ENST00000540539 PSPHP78330 225 aa9.28□□□□□ -0.92
CLIP1-214ENST00000540539 PTPN11Q06124 597 aaPredicted RBP9.28□□□□□ -0.92
CLIP1-214ENST00000540539 POU5F1BQ06416 359 aa9.28□□□□□ -0.92
CLIP1-214ENST00000540539 PPP3CAQ08209 521 aa9.28□□□□□ -0.92
CLIP1-214ENST00000540539 DPYSL3Q14195 570 aa9.28□□□□□ -0.92
CLIP1-214ENST00000540539 FSCN1Q16658 493 aaKnown RBP9.28□□□□□ -0.92
CLIP1-214ENST00000540539 RUNDC3AQ59EK9 446 aa9.28□□□□□ -0.92
CLIP1-214ENST00000540539 TFDP3Q5H9I0 405 aa9.28□□□□□ -0.92
CLIP1-214ENST00000540539 TXNRD3NBQ6F5E7 133 aa9.28□□□□□ -0.92
CLIP1-214ENST00000540539 ANKRD54Q6NXT1 300 aa9.28□□□□□ -0.92
CLIP1-214ENST00000540539 MACC1Q6ZN28 852 aa9.28□□□□□ -0.92
CLIP1-214ENST00000540539 BTN2A1Q7KYR7 527 aa9.28□□□□□ -0.92
CLIP1-214ENST00000540539 STRA8Q7Z7C7 330 aa9.28□□□□□ -0.92
CLIP1-214ENST00000540539 CLEC4FQ8N1N0 589 aa9.28□□□□□ -0.92
CLIP1-214ENST00000540539 RDH13Q8NBN7 331 aa9.28□□□□□ -0.92
CLIP1-214ENST00000540539 DEPDC1BQ8WUY9 529 aa9.28□□□□□ -0.92
CLIP1-214ENST00000540539 STON2Q8WXE9 905 aa9.28□□□□□ -0.92
CLIP1-214ENST00000540539 TCEAL3Q969E4 200 aa9.28□□□□□ -0.92
CLIP1-214ENST00000540539 C11orf24Q96F05 449 aaPredicted RBP9.28□□□□□ -0.92
CLIP1-214ENST00000540539 GATA5Q9BWX5 397 aaPredicted RBP9.28□□□□□ -0.92
CLIP1-214ENST00000540539 ZNF408Q9H9D4 720 aa9.28□□□□□ -0.92
CLIP1-214ENST00000540539 CUEDC1Q9NWM3 386 aaPredicted RBP9.28□□□□□ -0.92
CLIP1-214ENST00000540539 SDHAF2Q9NX18 166 aa9.28□□□□□ -0.92
CLIP1-214ENST00000540539 ABCG2Q9UNQ0 655 aa9.28□□□□□ -0.92
CLIP1-214ENST00000540539 ALG5Q9Y673 324 aa9.28□□□□□ -0.92
CLIP1-214ENST00000540539 POM121CA8CG34 1229 aa9.27□□□□□ -0.92
CLIP1-214ENST00000540539 WASHC1A8K0Z3 465 aa9.27□□□□□ -0.92
CLIP1-214ENST00000540539 ERN1O75460 977 aaKnown RBP9.27□□□□□ -0.92
CLIP1-214ENST00000540539 EIF3GO75821 320 aaKnown RBP eCLIP9.27□□□□□ -0.92
CLIP1-214ENST00000540539 APOL3O95236 402 aa9.27□□□□□ -0.92
CLIP1-214ENST00000540539 IGHV2-70P01814 119 aa9.27□□□□□ -0.92
CLIP1-214ENST00000540539 MT-ND2P03891 347 aa9.27□□□□□ -0.92
CLIP1-214ENST00000540539 URODP06132 367 aa9.27□□□□□ -0.92
CLIP1-214ENST00000540539 PIK3CBP42338 1070 aa9.27□□□□□ -0.92
CLIP1-214ENST00000540539 FNTBP49356 437 aa9.27□□□□□ -0.92
CLIP1-214ENST00000540539 PSMC6P62333 389 aa9.27□□□□□ -0.92
CLIP1-214ENST00000540539 ERV3-1Q14264 604 aa9.27□□□□□ -0.92
CLIP1-214ENST00000540539 FGFBP1Q14512 234 aa9.27□□□□□ -0.92
CLIP1-214ENST00000540539 GPR19Q15760 415 aa9.27□□□□□ -0.92
CLIP1-214ENST00000540539 SWI5Q1ZZU3 235 aa9.27□□□□□ -0.92
CLIP1-214ENST00000540539 HFEQ30201 348 aa9.27□□□□□ -0.92
CLIP1-214ENST00000540539 ARMCX4Q5H9R4 360 aa9.27□□□□□ -0.92
CLIP1-214ENST00000540539 KIAA1614Q5VZ46 1190 aa9.27□□□□□ -0.92
CLIP1-214ENST00000540539 MOB2Q70IA6 237 aa9.27□□□□□ -0.92
CLIP1-214ENST00000540539 RHOUQ7L0Q8 258 aa9.27□□□□□ -0.92
CLIP1-214ENST00000540539 SIAH1Q8IUQ4 282 aa9.27□□□□□ -0.92
CLIP1-214ENST00000540539 OR5T2Q8NGG2 359 aa9.27□□□□□ -0.92
CLIP1-214ENST00000540539 CNIH3Q8TBE1 160 aa9.27□□□□□ -0.92
CLIP1-214ENST00000540539 MFSD3Q96ES6 412 aa9.27□□□□□ -0.92
CLIP1-214ENST00000540539 AURKBQ96GD4 344 aaPredicted RBP9.27□□□□□ -0.92
CLIP1-214ENST00000540539 QKIQ96PU8 341 aaKnown RBP eCLIP9.27□□□□□ -0.92
CLIP1-214ENST00000540539 WNT5BQ9H1J7 359 aa9.27□□□□□ -0.92
CLIP1-214ENST00000540539 ACOT13Q9NPJ3 140 aa9.27□□□□□ -0.92
CLIP1-214ENST00000540539 USE1Q9NZ43 259 aa9.27□□□□□ -0.92
CLIP1-214ENST00000540539 CCDC167Q9P0B6 97 aa9.27□□□□□ -0.92
CLIP1-214ENST00000540539 NYAP2Q9P242 653 aa9.27□□□□□ -0.92
CLIP1-214ENST00000540539 MLXQ9UH92 298 aa9.27□□□□□ -0.92
CLIP1-214ENST00000540539 NDUFAF1Q9Y375 327 aa9.27□□□□□ -0.92
CLIP1-214ENST00000540539 RAP2CQ9Y3L5 183 aa9.27□□□□□ -0.92
CLIP1-214ENST00000540539 OTOFQ9HC10 1997 aa9.27□□□□□ -0.92
CLIP1-214ENST00000540539 FAM74A7A6NL05 159 aa9.27□□□□□ -0.93
CLIP1-214ENST00000540539 PRSS47A8MTI9 375 aa9.27□□□□□ -0.93
CLIP1-214ENST00000540539 PRMT5O14744 637 aaPredicted RBP9.27□□□□□ -0.93
CLIP1-214ENST00000540539 IFNA7P01567 189 aa9.27□□□□□ -0.93
CLIP1-214ENST00000540539 LTFP02788 710 aa9.27□□□□□ -0.93
CLIP1-214ENST00000540539 CPN2P22792 545 aa9.27□□□□□ -0.93
CLIP1-214ENST00000540539 CNTFP26441 200 aa9.27□□□□□ -0.93
CLIP1-214ENST00000540539 TRIP4Q15650 581 aaPredicted RBP9.27□□□□□ -0.93
CLIP1-214ENST00000540539 SYT16Q17RD7 645 aa9.27□□□□□ -0.93
CLIP1-214ENST00000540539 MICAQ29983 383 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms