RNA–Protein interactions for RNA: ENST00000540159.3

BNIP3-202, Transcript of BCL2 interacting protein 3, humanhuman

TSL 1 (best)

Gene BNIP3, Length 3,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP3-202ENST00000540159 TUBA4AP68366 448 aa13.37□□□□□ -0.27
BNIP3-202ENST00000540159 SP3Q02447 781 aa13.37□□□□□ -0.27
BNIP3-202ENST00000540159 KCNAB2Q13303 367 aa13.37□□□□□ -0.27
BNIP3-202ENST00000540159 PWP1Q13610 501 aa13.37□□□□□ -0.27
BNIP3-202ENST00000540159 DGCR6Q14129 220 aa13.37□□□□□ -0.27
BNIP3-202ENST00000540159 CCDC81Q6ZN84 652 aa13.37□□□□□ -0.27
BNIP3-202ENST00000540159 VRK3Q8IV63 474 aa13.37□□□□□ -0.27
BNIP3-202ENST00000540159 SELENOMQ8WWX9 145 aa13.37□□□□□ -0.27
BNIP3-202ENST00000540159 ISG20Q96AZ6 181 aaKnown RBP13.37□□□□□ -0.27
BNIP3-202ENST00000540159 CCDC138Q96M89 665 aa13.37□□□□□ -0.27
BNIP3-202ENST00000540159 DPH2Q9BQC3 489 aaPredicted RBP13.37□□□□□ -0.27
BNIP3-202ENST00000540159 AMBRA1Q9C0C7 1298 aa13.37□□□□□ -0.27
BNIP3-202ENST00000540159 LHPPQ9H008 270 aa13.37□□□□□ -0.27
BNIP3-202ENST00000540159 ZNF334Q9HCZ1 680 aaPredicted RBP13.37□□□□□ -0.27
BNIP3-202ENST00000540159 TIMMDC1Q9NPL8 285 aa13.37□□□□□ -0.27
BNIP3-202ENST00000540159 GPRC5BQ9NZH0 403 aa13.37□□□□□ -0.27
BNIP3-202ENST00000540159 MAGEL2Q9UJ55 1249 aa13.37□□□□□ -0.27
BNIP3-202ENST00000540159 EIF3LQ9Y262 564 aaKnown RBP13.37□□□□□ -0.27
BNIP3-202ENST00000540159 VPS9D1Q9Y2B5 631 aa13.37□□□□□ -0.27
BNIP3-202ENST00000540159 SCN5AQ14524 2016 aa13.37□□□□□ -0.27
BNIP3-202ENST00000540159 ZBBXA8MT70 800 aa13.36□□□□□ -0.27
BNIP3-202ENST00000540159 BOLA2-SMG1P6H3BVE0 249 aa13.36□□□□□ -0.27
BNIP3-202ENST00000540159 TBC1D4O60343 1298 aa13.36□□□□□ -0.27
BNIP3-202ENST00000540159 PDYNP01213 254 aa13.36□□□□□ -0.27
BNIP3-202ENST00000540159 FTH1P02794 183 aa13.36□□□□□ -0.27
BNIP3-202ENST00000540159 ALPLP05186 524 aa13.36□□□□□ -0.27
BNIP3-202ENST00000540159 ITGALP20701 1170 aa13.36□□□□□ -0.27
BNIP3-202ENST00000540159 FPGSQ05932 587 aa13.36□□□□□ -0.27
BNIP3-202ENST00000540159 FOXM1Q08050 763 aa13.36□□□□□ -0.27
BNIP3-202ENST00000540159 DAG1Q14118 895 aa13.36□□□□□ -0.27
BNIP3-202ENST00000540159 ADNP2Q6IQ32 1131 aa13.36□□□□□ -0.27
BNIP3-202ENST00000540159 NPAS4Q8IUM7 802 aa13.36□□□□□ -0.27
BNIP3-202ENST00000540159 HS6ST3Q8IZP7 471 aa13.36□□□□□ -0.27
BNIP3-202ENST00000540159 ZBTB2Q8N680 514 aa13.36□□□□□ -0.27
BNIP3-202ENST00000540159 PCDH12Q9NPG4 1184 aa13.36□□□□□ -0.27
BNIP3-202ENST00000540159 PCDHB3Q9Y5E6 796 aa13.36□□□□□ -0.27
BNIP3-202ENST00000540159 KIAA0100Q14667 2235 aaKnown RBP13.36□□□□□ -0.27
BNIP3-202ENST00000540159 H7C4K7 107 aa13.36□□□□□ -0.27
BNIP3-202ENST00000540159 CXCR6O00574 342 aa13.36□□□□□ -0.27
BNIP3-202ENST00000540159 PGLSO95336 258 aa13.36□□□□□ -0.27
BNIP3-202ENST00000540159 RAP2AP10114 183 aa13.36□□□□□ -0.27
BNIP3-202ENST00000540159 BCKDHAP12694 445 aa13.36□□□□□ -0.27
BNIP3-202ENST00000540159 EPB42P16452 691 aa13.36□□□□□ -0.27
BNIP3-202ENST00000540159 GGT1P19440 569 aa13.36□□□□□ -0.27
BNIP3-202ENST00000540159 RPIAP49247 311 aa13.36□□□□□ -0.27
BNIP3-202ENST00000540159 TUFMP49411 452 aaKnown RBP13.36□□□□□ -0.27
BNIP3-202ENST00000540159 SH3BGRP55822 239 aaPredicted RBP13.36□□□□□ -0.27
BNIP3-202ENST00000540159 CTU2Q2VPK5 515 aaKnown RBP13.36□□□□□ -0.27
BNIP3-202ENST00000540159 ATP13A5Q4VNC0 1218 aa13.36□□□□□ -0.27
BNIP3-202ENST00000540159 BBS7Q8IWZ6 715 aa13.36□□□□□ -0.27
BNIP3-202ENST00000540159 CMTM8Q8IZV2 173 aa13.36□□□□□ -0.27
BNIP3-202ENST00000540159 BPIFB1Q8TDL5 484 aa13.36□□□□□ -0.27
BNIP3-202ENST00000540159 SLC22A17Q8WUG5 538 aa13.36□□□□□ -0.27
BNIP3-202ENST00000540159 RHBDF1Q96CC6 855 aa13.36□□□□□ -0.27
BNIP3-202ENST00000540159 OSBPL6Q9BZF3 934 aa13.36□□□□□ -0.27
BNIP3-202ENST00000540159 ZDHHC6Q9H6R6 413 aa13.36□□□□□ -0.27
BNIP3-202ENST00000540159 LMCD1Q9NZU5 365 aa13.36□□□□□ -0.27
BNIP3-202ENST00000540159 ELOVL7A1L3X0 281 aa13.36□□□□□ -0.27
BNIP3-202ENST00000540159 INPPL1O15357 1258 aa13.36□□□□□ -0.27
BNIP3-202ENST00000540159 PRSS23O95084 383 aa13.36□□□□□ -0.27
BNIP3-202ENST00000540159 GNPDA1P46926 289 aa13.36□□□□□ -0.27
BNIP3-202ENST00000540159 ADARB1P78563 741 aaKnown RBP13.36□□□□□ -0.27
BNIP3-202ENST00000540159 ZXDCQ2QGD7 858 aaPredicted RBP13.36□□□□□ -0.27
BNIP3-202ENST00000540159 DGKKQ5KSL6 1271 aa13.36□□□□□ -0.27
BNIP3-202ENST00000540159 OR4F3Q6IEY1 312 aa13.36□□□□□ -0.27
BNIP3-202ENST00000540159 EFL1Q7Z2Z2 1120 aaKnown RBP13.36□□□□□ -0.27
BNIP3-202ENST00000540159 PACRGLQ8N7B6 248 aa13.36□□□□□ -0.27
BNIP3-202ENST00000540159 ZNF366Q8N895 744 aa13.36□□□□□ -0.27
BNIP3-202ENST00000540159 SCAMP4Q969E2 229 aa13.36□□□□□ -0.27
BNIP3-202ENST00000540159 FAM120BQ96EK7 910 aaKnown RBP13.36□□□□□ -0.27
BNIP3-202ENST00000540159 MTERF1Q99551 399 aaKnown RBP13.36□□□□□ -0.27
BNIP3-202ENST00000540159 ACPTQ9BZG2 426 aa13.36□□□□□ -0.27
BNIP3-202ENST00000540159 CD244Q9BZW8 370 aa13.36□□□□□ -0.27
BNIP3-202ENST00000540159 FBXO10Q9UK96 956 aa13.36□□□□□ -0.27
BNIP3-202ENST00000540159 NINQ8N4C6 2090 aa13.35□□□□□ -0.27
BNIP3-202ENST00000540159 OR2AG2A6NM03 316 aa13.35□□□□□ -0.27
BNIP3-202ENST00000540159 RGS14O43566 566 aa13.35□□□□□ -0.27
BNIP3-202ENST00000540159 WDR47O94967 919 aa13.35□□□□□ -0.27
BNIP3-202ENST00000540159 CPSF4O95639 269 aaKnown RBP13.35□□□□□ -0.27
BNIP3-202ENST00000540159 INHAP05111 366 aa13.35□□□□□ -0.27
BNIP3-202ENST00000540159 UGT2B4P06133 528 aa13.35□□□□□ -0.27
BNIP3-202ENST00000540159 FMO3P31513 532 aa13.35□□□□□ -0.27
BNIP3-202ENST00000540159 ALDH3A2P51648 485 aa13.35□□□□□ -0.27
BNIP3-202ENST00000540159 LRRC66Q68CR7 880 aa13.35□□□□□ -0.27
BNIP3-202ENST00000540159 CES5AQ6NT32 575 aa13.35□□□□□ -0.27
BNIP3-202ENST00000540159 PROSER1Q86XN7 944 aa13.35□□□□□ -0.27
BNIP3-202ENST00000540159 RIMKLAQ8IXN7 391 aa13.35□□□□□ -0.27
BNIP3-202ENST00000540159 RBFAQ8N0V3 343 aa13.35□□□□□ -0.27
BNIP3-202ENST00000540159 GIPC3Q8TF64 312 aa13.35□□□□□ -0.27
BNIP3-202ENST00000540159 SNX19Q92543 992 aa13.35□□□□□ -0.27
BNIP3-202ENST00000540159 UBE2FQ969M7 185 aa13.35□□□□□ -0.27
BNIP3-202ENST00000540159 KLF16Q9BXK1 252 aaPredicted RBP13.35□□□□□ -0.27
BNIP3-202ENST00000540159 MTG2Q9H4K7 406 aa13.35□□□□□ -0.27
BNIP3-202ENST00000540159 HEBP1Q9NRV9 189 aa13.35□□□□□ -0.27
BNIP3-202ENST00000540159 GNPTGQ9UJJ9 305 aa13.35□□□□□ -0.27
BNIP3-202ENST00000540159 PTBP2Q9UKA9 531 aaKnown RBP13.35□□□□□ -0.27
BNIP3-202ENST00000540159 SLC22A14Q9Y267 594 aa13.35□□□□□ -0.27
BNIP3-202ENST00000540159 PLXNA4Q9HCM2 1894 aa13.35□□□□□ -0.27
BNIP3-202ENST00000540159 NOL3O60936 208 aaKnown RBP13.35□□□□□ -0.27
BNIP3-202ENST00000540159 NTRK1P04629 796 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms