RNA–Protein interactions for RNA: ENST00000539746.1

VTN-202, Transcript of vitronectin, humanhuman

TSL 2

Gene VTN, Length 609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-202ENST00000539746 EEF1DP29692 281 aaKnown RBP11.5□□□□□ -0.57
VTN-202ENST00000539746 GRK3P35626 688 aa11.5□□□□□ -0.57
VTN-202ENST00000539746 HNF4AP41235 474 aa11.5□□□□□ -0.57
VTN-202ENST00000539746 MNAT1P51948 309 aa11.5□□□□□ -0.57
VTN-202ENST00000539746 ARFIP2P53365 341 aa11.5□□□□□ -0.57
VTN-202ENST00000539746 GYS2P54840 703 aa11.5□□□□□ -0.57
VTN-202ENST00000539746 ABATP80404 500 aa11.5□□□□□ -0.57
VTN-202ENST00000539746 CSTF1Q05048 431 aaKnown RBP11.5□□□□□ -0.57
VTN-202ENST00000539746 CLCQ05315 142 aa11.5□□□□□ -0.57
VTN-202ENST00000539746 DLG1Q12959 904 aa11.5□□□□□ -0.57
VTN-202ENST00000539746 ABRQ12979 859 aa11.5□□□□□ -0.57
VTN-202ENST00000539746 MAD2L1Q13257 205 aaPredicted RBP11.5□□□□□ -0.57
VTN-202ENST00000539746 OR4D1Q15615 310 aa11.5□□□□□ -0.57
VTN-202ENST00000539746 CYP2A13Q16696 494 aa11.5□□□□□ -0.57
VTN-202ENST00000539746 SPDYAQ5MJ70 313 aa11.5□□□□□ -0.57
VTN-202ENST00000539746 CWF19L1Q69YN2 538 aaKnown RBP11.5□□□□□ -0.57
VTN-202ENST00000539746 ABRAXAS1Q6UWZ7 409 aa11.5□□□□□ -0.57
VTN-202ENST00000539746 CYHR1Q6ZMK1 362 aa11.5□□□□□ -0.57
VTN-202ENST00000539746 RNF165Q6ZSG1 346 aa11.5□□□□□ -0.57
VTN-202ENST00000539746 GPRIN3Q6ZVF9 776 aa11.5□□□□□ -0.57
VTN-202ENST00000539746 TRIM74Q86UV6 250 aa11.5□□□□□ -0.57
VTN-202ENST00000539746 HID1Q8IV36 788 aa11.5□□□□□ -0.57
VTN-202ENST00000539746 ZNF547Q8IVP9 402 aa11.5□□□□□ -0.57
VTN-202ENST00000539746 KLHDC8AQ8IYD2 350 aa11.5□□□□□ -0.57
VTN-202ENST00000539746 SYTL1Q8IYJ3 562 aa11.5□□□□□ -0.57
VTN-202ENST00000539746 PHACTR4Q8IZ21 702 aa11.5□□□□□ -0.57
VTN-202ENST00000539746 SMPDL3AQ92484 453 aa11.5□□□□□ -0.57
VTN-202ENST00000539746 PTERQ96BW5 349 aa11.5□□□□□ -0.57
VTN-202ENST00000539746 ZBTB9Q96C00 473 aa11.5□□□□□ -0.57
VTN-202ENST00000539746 RHBDF1Q96CC6 855 aa11.5□□□□□ -0.57
VTN-202ENST00000539746 METTL2AQ96IZ6 378 aaKnown RBP11.5□□□□□ -0.57
VTN-202ENST00000539746 BMFQ96LC9 184 aa11.5□□□□□ -0.57
VTN-202ENST00000539746 CENPKQ9BS16 269 aa11.5□□□□□ -0.57
VTN-202ENST00000539746 EFCAB11Q9BUY7 163 aa11.5□□□□□ -0.57
VTN-202ENST00000539746 GATA5Q9BWX5 397 aaPredicted RBP11.5□□□□□ -0.57
VTN-202ENST00000539746 MIR1-1HGQ9H1L0 117 aa11.5□□□□□ -0.57
VTN-202ENST00000539746 OR52A5Q9H2C5 316 aa11.5□□□□□ -0.57
VTN-202ENST00000539746 EHD1Q9H4M9 534 aa11.5□□□□□ -0.57
VTN-202ENST00000539746 CCDC177Q9NQR7 707 aaPredicted RBP11.5□□□□□ -0.57
VTN-202ENST00000539746 GPR27Q9NS67 375 aa11.5□□□□□ -0.57
VTN-202ENST00000539746 DNAJC11Q9NVH1 559 aa11.5□□□□□ -0.57
VTN-202ENST00000539746 DNAJC28Q9NX36 388 aa11.5□□□□□ -0.57
VTN-202ENST00000539746 OR6C2Q9NZP2 312 aa11.5□□□□□ -0.57
VTN-202ENST00000539746 APOBEC3BQ9UH17 382 aaKnown RBP11.5□□□□□ -0.57
VTN-202ENST00000539746 MAPRE3Q9UPY8 281 aa11.5□□□□□ -0.57
VTN-202ENST00000539746 ENTPD2Q9Y5L3 495 aa11.5□□□□□ -0.57
VTN-202ENST00000539746 CSNK1G3Q9Y6M4 447 aa11.5□□□□□ -0.57
VTN-202ENST00000539746 POM121BA6NF01 834 aa11.49□□□□□ -0.57
VTN-202ENST00000539746 FOXO6A8MYZ6 492 aa11.49□□□□□ -0.57
VTN-202ENST00000539746 SLC22A2O15244 555 aa11.49□□□□□ -0.57
VTN-202ENST00000539746 SGTAO43765 313 aa11.49□□□□□ -0.57
VTN-202ENST00000539746 SNX3O60493 162 aa11.49□□□□□ -0.57
VTN-202ENST00000539746 FOXD2O60548 495 aaPredicted RBP11.49□□□□□ -0.57
VTN-202ENST00000539746 CCNT2O60583 730 aaKnown RBP11.49□□□□□ -0.57
VTN-202ENST00000539746 ATP5HO75947 161 aa11.49□□□□□ -0.57
VTN-202ENST00000539746 WDR47O94967 919 aa11.49□□□□□ -0.57
VTN-202ENST00000539746 C1orf105O95561 183 aa11.49□□□□□ -0.57
VTN-202ENST00000539746 CSF2P04141 144 aa11.49□□□□□ -0.57
VTN-202ENST00000539746 SYPP08247 313 aa11.49□□□□□ -0.57
VTN-202ENST00000539746 F3P13726 295 aa11.49□□□□□ -0.57
VTN-202ENST00000539746 NME1P15531 152 aaKnown RBP11.49□□□□□ -0.57
VTN-202ENST00000539746 ADSLP30566 484 aaPredicted RBP11.49□□□□□ -0.57
VTN-202ENST00000539746 ACTR1BP42025 376 aa11.49□□□□□ -0.57
VTN-202ENST00000539746 RASSF2P50749 326 aa11.49□□□□□ -0.57
VTN-202ENST00000539746 RAB28P51157 221 aa11.49□□□□□ -0.57
VTN-202ENST00000539746 ACTR1AP61163 376 aa11.49□□□□□ -0.57
VTN-202ENST00000539746 GTF2H2Q13888 395 aa11.49□□□□□ -0.57
VTN-202ENST00000539746 NFE2L1Q14494 772 aa11.49□□□□□ -0.57
VTN-202ENST00000539746 SMU1Q2TAY7 513 aa11.49□□□□□ -0.57
VTN-202ENST00000539746 KHDC1Q4VXA5 237 aaKnown RBP11.49□□□□□ -0.57
VTN-202ENST00000539746 ARL13AQ5H913 290 aaPredicted RBP11.49□□□□□ -0.57
VTN-202ENST00000539746 SH2D4BQ5SQS7 431 aa11.49□□□□□ -0.57
VTN-202ENST00000539746 LIPJQ5W064 366 aa11.49□□□□□ -0.57
VTN-202ENST00000539746 CAPRIN2Q6IMN6 1127 aaKnown RBP11.49□□□□□ -0.57
VTN-202ENST00000539746 GTF2H2CQ6P1K8 395 aa11.49□□□□□ -0.57
VTN-202ENST00000539746 FAM47EQ6ZV65 393 aa11.49□□□□□ -0.57
VTN-202ENST00000539746 TAF8Q7Z7C8 310 aa11.49□□□□□ -0.57
VTN-202ENST00000539746 KRT78Q8N1N4 520 aa11.49□□□□□ -0.57
VTN-202ENST00000539746 SPATA6LQ8N4H0 392 aa11.49□□□□□ -0.57
VTN-202ENST00000539746 TMEM151AQ8N4L1 468 aa11.49□□□□□ -0.57
VTN-202ENST00000539746 TTLQ8NG68 377 aa11.49□□□□□ -0.57
VTN-202ENST00000539746 OR6Y1Q8NGX8 325 aa11.49□□□□□ -0.57
VTN-202ENST00000539746 CFAP61Q8NHU2 1237 aa11.49□□□□□ -0.57
VTN-202ENST00000539746 HMGCLL1Q8TB92 370 aa11.49□□□□□ -0.57
VTN-202ENST00000539746 GPBAR1Q8TDU6 330 aa11.49□□□□□ -0.57
VTN-202ENST00000539746 ZNF483Q8TF39 744 aaPredicted RBP11.49□□□□□ -0.57
VTN-202ENST00000539746 ZNF473Q8WTR7 871 aaKnown RBP11.49□□□□□ -0.57
VTN-202ENST00000539746 ZC3H10Q96K80 434 aaKnown RBP11.49□□□□□ -0.57
VTN-202ENST00000539746 C12orf66Q96MD2 445 aa11.49□□□□□ -0.57
VTN-202ENST00000539746 RILPQ96NA2 401 aa11.49□□□□□ -0.57
VTN-202ENST00000539746 TMEM237Q96Q45 408 aa11.49□□□□□ -0.57
VTN-202ENST00000539746 NTMT1Q9BV86 223 aa11.49□□□□□ -0.57
VTN-202ENST00000539746 DUSP23Q9BVJ7 150 aa11.49□□□□□ -0.57
VTN-202ENST00000539746 LGR4Q9BXB1 951 aa11.49□□□□□ -0.57
VTN-202ENST00000539746 KIR3DX1Q9H7L2 352 aa11.49□□□□□ -0.57
VTN-202ENST00000539746 INTS7Q9NVH2 962 aaKnown RBP11.49□□□□□ -0.57
VTN-202ENST00000539746 DNAAF2Q9NVR5 837 aaKnown RBP11.49□□□□□ -0.57
VTN-202ENST00000539746 ZNF358Q9NW07 568 aa11.49□□□□□ -0.57
VTN-202ENST00000539746 TMEM45AQ9NWC5 275 aa11.49□□□□□ -0.57
VTN-202ENST00000539746 TRPS1Q9UHF7 1281 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms