RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 DGCR6LQ9BY27 220 aa13.76□□□□□ -0.21
UBE3B-210ENST00000539599 MAGEL2Q9UJ55 1249 aa13.76□□□□□ -0.21
UBE3B-210ENST00000539599 INTS6Q9UL03 887 aaKnown RBP13.76□□□□□ -0.21
UBE3B-210ENST00000539599 TMCO1Q9UM00 188 aa13.76□□□□□ -0.21
UBE3B-210ENST00000539599 J3QRK9 145 aa13.76□□□□□ -0.21
UBE3B-210ENST00000539599 XYLBO75191 536 aa13.76□□□□□ -0.21
UBE3B-210ENST00000539599 ZBTB11O95625 1053 aaPredicted RBP13.76□□□□□ -0.21
UBE3B-210ENST00000539599 BCKDHAP12694 445 aa13.76□□□□□ -0.21
UBE3B-210ENST00000539599 PSMD7P51665 324 aa13.76□□□□□ -0.21
UBE3B-210ENST00000539599 LMAN2Q12907 356 aa13.76□□□□□ -0.21
UBE3B-210ENST00000539599 DAG1Q14118 895 aa13.76□□□□□ -0.21
UBE3B-210ENST00000539599 CRY1Q16526 586 aa13.76□□□□□ -0.21
UBE3B-210ENST00000539599 PGS1Q32NB8 556 aa13.76□□□□□ -0.21
UBE3B-210ENST00000539599 GPRC6AQ5T6X5 926 aa13.76□□□□□ -0.21
UBE3B-210ENST00000539599 IRAK1BP1Q5VVH5 260 aa13.76□□□□□ -0.21
UBE3B-210ENST00000539599 ADNP2Q6IQ32 1131 aa13.76□□□□□ -0.21
UBE3B-210ENST00000539599 ANKRD26P1Q6NSI1 321 aa13.76□□□□□ -0.21
UBE3B-210ENST00000539599 PROSER1Q86XN7 944 aa13.76□□□□□ -0.21
UBE3B-210ENST00000539599 HS6ST3Q8IZP7 471 aa13.76□□□□□ -0.21
UBE3B-210ENST00000539599 ZNF461Q8TAF7 563 aa13.76□□□□□ -0.21
UBE3B-210ENST00000539599 TSPEARQ8WU66 669 aa13.76□□□□□ -0.21
UBE3B-210ENST00000539599 FBXL8Q96CD0 374 aa13.76□□□□□ -0.21
UBE3B-210ENST00000539599 SLC47A1Q96FL8 570 aa13.76□□□□□ -0.21
UBE3B-210ENST00000539599 MBOAT4Q96T53 435 aa13.76□□□□□ -0.21
UBE3B-210ENST00000539599 RHNO1Q9BSD3 238 aa13.76□□□□□ -0.21
UBE3B-210ENST00000539599 BBS2Q9BXC9 721 aa13.76□□□□□ -0.21
UBE3B-210ENST00000539599 ATG10Q9H0Y0 220 aa13.76□□□□□ -0.21
UBE3B-210ENST00000539599 LRTM1Q9HBL6 345 aa13.76□□□□□ -0.21
UBE3B-210ENST00000539599 MAGEE1Q9HCI5 957 aa13.76□□□□□ -0.21
UBE3B-210ENST00000539599 ZNF639Q9UID6 485 aa13.76□□□□□ -0.21
UBE3B-210ENST00000539599 FAF1Q9UNN5 650 aaPredicted RBP13.76□□□□□ -0.21
UBE3B-210ENST00000539599 OARD1Q9Y530 152 aa13.76□□□□□ -0.21
UBE3B-210ENST00000539599 G3V2T6 193 aa13.75□□□□□ -0.21
UBE3B-210ENST00000539599 MANBAO00462 879 aa13.75□□□□□ -0.21
UBE3B-210ENST00000539599 GNGT2O14610 69 aa13.75□□□□□ -0.21
UBE3B-210ENST00000539599 PRAMEF4O60810 478 aa13.75□□□□□ -0.21
UBE3B-210ENST00000539599 RAP2AP10114 183 aa13.75□□□□□ -0.21
UBE3B-210ENST00000539599 THRBP10828 461 aa13.75□□□□□ -0.21
UBE3B-210ENST00000539599 JAK1P23458 1154 aa13.75□□□□□ -0.21
UBE3B-210ENST00000539599 CCR7P32248 378 aa13.75□□□□□ -0.21
UBE3B-210ENST00000539599 MLLT10P55197 1068 aa13.75□□□□□ -0.21
UBE3B-210ENST00000539599 BOP1Q14137 746 aaKnown RBP13.75□□□□□ -0.21
UBE3B-210ENST00000539599 SPIDRQ14159 915 aa13.75□□□□□ -0.21
UBE3B-210ENST00000539599 CDKN3Q16667 212 aa13.75□□□□□ -0.21
UBE3B-210ENST00000539599 POM121L1PQ3SYA9 428 aa13.75□□□□□ -0.21
UBE3B-210ENST00000539599 PRAMEF9Q5VWM5 478 aa13.75□□□□□ -0.21
UBE3B-210ENST00000539599 RBFAQ8N0V3 343 aa13.75□□□□□ -0.21
UBE3B-210ENST00000539599 IGSF21Q96ID5 467 aa13.75□□□□□ -0.21
UBE3B-210ENST00000539599 ACTR8Q9H981 624 aa13.75□□□□□ -0.21
UBE3B-210ENST00000539599 GNPTGQ9UJJ9 305 aa13.75□□□□□ -0.21
UBE3B-210ENST00000539599 TRIM64CA6NLI5 447 aa13.75□□□□□ -0.21
UBE3B-210ENST00000539599 PTGES3LE9PB15 166 aa13.75□□□□□ -0.21
UBE3B-210ENST00000539599 CXCR6O00574 342 aa13.75□□□□□ -0.21
UBE3B-210ENST00000539599 HS6ST1O60243 411 aa13.75□□□□□ -0.21
UBE3B-210ENST00000539599 SERPINA1P01009 418 aa13.75□□□□□ -0.21
UBE3B-210ENST00000539599 ITGALP20701 1170 aa13.75□□□□□ -0.21
UBE3B-210ENST00000539599 LHCGRP22888 699 aa13.75□□□□□ -0.21
UBE3B-210ENST00000539599 ALDH3A2P51648 485 aa13.75□□□□□ -0.21
UBE3B-210ENST00000539599 GRIK2Q13002 908 aa13.75□□□□□ -0.21
UBE3B-210ENST00000539599 FAM98BQ52LJ0 330 aaKnown RBP13.75□□□□□ -0.21
UBE3B-210ENST00000539599 LRRC66Q68CR7 880 aa13.75□□□□□ -0.21
UBE3B-210ENST00000539599 SNX20Q7Z614 316 aa13.75□□□□□ -0.21
UBE3B-210ENST00000539599 SLC43A3Q8NBI5 491 aa13.75□□□□□ -0.21
UBE3B-210ENST00000539599 VOPP1Q96AW1 172 aa13.75□□□□□ -0.21
UBE3B-210ENST00000539599 CSF3RQ99062 836 aa13.75□□□□□ -0.21
UBE3B-210ENST00000539599 LHPPQ9H008 270 aa13.75□□□□□ -0.21
UBE3B-210ENST00000539599 TIMMDC1Q9NPL8 285 aa13.75□□□□□ -0.21
UBE3B-210ENST00000539599 ARL15Q9NXU5 204 aa13.75□□□□□ -0.21
UBE3B-210ENST00000539599 PPT2Q9UMR5 302 aa13.75□□□□□ -0.21
UBE3B-210ENST00000539599 DGKBQ9Y6T7 804 aa13.75□□□□□ -0.21
UBE3B-210ENST00000539599 XPNPEP2O43895 674 aa13.74□□□□□ -0.21
UBE3B-210ENST00000539599 CKMP06732 381 aa13.74□□□□□ -0.21
UBE3B-210ENST00000539599 HTR1AP08908 422 aa13.74□□□□□ -0.21
UBE3B-210ENST00000539599 GNPDA1P46926 289 aa13.74□□□□□ -0.21
UBE3B-210ENST00000539599 CASP9P55211 416 aa13.74□□□□□ -0.21
UBE3B-210ENST00000539599 ELAVL2Q12926 359 aaKnown RBP13.74□□□□□ -0.21
UBE3B-210ENST00000539599 FOXD4Q12950 439 aaPredicted RBP13.74□□□□□ -0.21
UBE3B-210ENST00000539599 MYBPC3Q14896 1274 aa13.74□□□□□ -0.21
UBE3B-210ENST00000539599 PON2Q15165 354 aa13.74□□□□□ -0.21
UBE3B-210ENST00000539599 FXNQ16595 210 aa13.74□□□□□ -0.21
UBE3B-210ENST00000539599 TBC1D25Q3MII6 688 aa13.74□□□□□ -0.21
UBE3B-210ENST00000539599 LAIR2Q6ISS4 152 aa13.74□□□□□ -0.21
UBE3B-210ENST00000539599 CMTM8Q8IZV2 173 aa13.74□□□□□ -0.21
UBE3B-210ENST00000539599 STK40Q8N2I9 435 aa13.74□□□□□ -0.21
UBE3B-210ENST00000539599 DRAXINQ8NBI3 349 aaPredicted RBP13.74□□□□□ -0.21
UBE3B-210ENST00000539599 SNX19Q92543 992 aa13.74□□□□□ -0.21
UBE3B-210ENST00000539599 DTNBP1Q96EV8 351 aa13.74□□□□□ -0.21
UBE3B-210ENST00000539599 APIPQ96GX9 242 aa13.74□□□□□ -0.21
UBE3B-210ENST00000539599 ELAC1Q9H777 363 aaKnown RBP13.74□□□□□ -0.21
UBE3B-210ENST00000539599 PKD2L2Q9NZM6 624 aa13.74□□□□□ -0.21
UBE3B-210ENST00000539599 EIF3LQ9Y262 564 aaKnown RBP13.74□□□□□ -0.21
UBE3B-210ENST00000539599 TNPO3Q9Y5L0 923 aaKnown RBP13.74□□□□□ -0.21
UBE3B-210ENST00000539599 REV3LO60673 3130 aa13.74□□□□□ -0.21
UBE3B-210ENST00000539599 TRIM64A6NGJ6 449 aa13.74□□□□□ -0.21
UBE3B-210ENST00000539599 K7EPI3 171 aa13.74□□□□□ -0.21
UBE3B-210ENST00000539599 RGS14O43566 566 aa13.74□□□□□ -0.21
UBE3B-210ENST00000539599 DEAF1O75398 565 aaPredicted RBP13.74□□□□□ -0.21
UBE3B-210ENST00000539599 UMPSP11172 480 aa13.74□□□□□ -0.21
UBE3B-210ENST00000539599 RGS4P49798 205 aa13.74□□□□□ -0.21
UBE3B-210ENST00000539599 TPD52P55327 224 aaPredicted RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms