RNA–Protein interactions for RNA: ENST00000539417.6

RPAIN-206, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-206ENST00000539417 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.28■□□□□ 0.04
RPAIN-206ENST00000539417 HECTD2Q5U5R9 776 aa15.28■□□□□ 0.04
RPAIN-206ENST00000539417 PAQR3Q6TCH7 311 aa15.28■□□□□ 0.04
RPAIN-206ENST00000539417 TMEM207Q6UWW9 146 aa15.28■□□□□ 0.04
RPAIN-206ENST00000539417 PIWIL4Q7Z3Z4 852 aaKnown RBP15.28■□□□□ 0.04
RPAIN-206ENST00000539417 GALNT7Q86SF2 657 aa15.28■□□□□ 0.04
RPAIN-206ENST00000539417 ZC3HC1Q86WB0 502 aaKnown RBP15.28■□□□□ 0.04
RPAIN-206ENST00000539417 AMIGO1Q86WK6 493 aa15.28■□□□□ 0.04
RPAIN-206ENST00000539417 PLXDC1Q8IUK5 500 aa15.28■□□□□ 0.04
RPAIN-206ENST00000539417 BMPERQ8N8U9 685 aa15.28■□□□□ 0.04
RPAIN-206ENST00000539417 GPATCH11Q8N954 259 aa15.28■□□□□ 0.04
RPAIN-206ENST00000539417 LINC01555Q8NAE3 123 aa15.28■□□□□ 0.04
RPAIN-206ENST00000539417 FBF1Q8TES7 1133 aa15.28■□□□□ 0.04
RPAIN-206ENST00000539417 SKA2Q8WVK7 121 aaPredicted RBP15.28■□□□□ 0.04
RPAIN-206ENST00000539417 ZCCHC14Q8WYQ9 949 aaKnown RBP15.28■□□□□ 0.04
RPAIN-206ENST00000539417 GRAMD1AQ96CP6 724 aa15.28■□□□□ 0.04
RPAIN-206ENST00000539417 DPYSL5Q9BPU6 564 aa15.28■□□□□ 0.04
RPAIN-206ENST00000539417 RAB33BQ9H082 229 aa15.28■□□□□ 0.04
RPAIN-206ENST00000539417 EPHA6Q9UF33 1036 aa15.28■□□□□ 0.04
RPAIN-206ENST00000539417 CFAP47Q6ZTR5 3102 aa15.28■□□□□ 0.04
RPAIN-206ENST00000539417 ARHGEF33A8MVX0 844 aa15.27■□□□□ 0.04
RPAIN-206ENST00000539417 TMX2-CTNND1H3BSU7 103 aa15.27■□□□□ 0.04
RPAIN-206ENST00000539417 PRAMEF10O60809 474 aa15.27■□□□□ 0.04
RPAIN-206ENST00000539417 C1orf105O95561 183 aa15.27■□□□□ 0.04
RPAIN-206ENST00000539417 MAPK10P53779 464 aa15.27■□□□□ 0.04
RPAIN-206ENST00000539417 SH3BP2P78314 561 aa15.27■□□□□ 0.04
RPAIN-206ENST00000539417 TRA2AQ13595 282 aaKnown RBP eCLIP15.27■□□□□ 0.04
RPAIN-206ENST00000539417 ZNF460Q14592 562 aa15.27■□□□□ 0.04
RPAIN-206ENST00000539417 KBTBD12Q3ZCT8 623 aa15.27■□□□□ 0.04
RPAIN-206ENST00000539417 CACHD1Q5VU97 1274 aa15.27■□□□□ 0.04
RPAIN-206ENST00000539417 UNC5DQ6UXZ4 953 aa15.27■□□□□ 0.04
RPAIN-206ENST00000539417 OOSP2Q86WS3 158 aa15.27■□□□□ 0.04
RPAIN-206ENST00000539417 RASGRP3Q8IV61 690 aa15.27■□□□□ 0.04
RPAIN-206ENST00000539417 FAM20CQ8IXL6 584 aa15.27■□□□□ 0.04
RPAIN-206ENST00000539417 GSPT2Q8IYD1 628 aaKnown RBP15.27■□□□□ 0.04
RPAIN-206ENST00000539417 FLVCR1-AS1Q8TAF5 88 aa15.27■□□□□ 0.04
RPAIN-206ENST00000539417 DENND1AQ8TEH3 1009 aa15.27■□□□□ 0.04
RPAIN-206ENST00000539417 EEF1AKMT1Q8WVE0 214 aa15.27■□□□□ 0.04
RPAIN-206ENST00000539417 INPP5DQ92835 1189 aa15.27■□□□□ 0.04
RPAIN-206ENST00000539417 TWSG1Q9GZX9 223 aa15.27■□□□□ 0.04
RPAIN-206ENST00000539417 KLHL25Q9H0H3 589 aa15.27■□□□□ 0.04
RPAIN-206ENST00000539417 APMAPQ9HDC9 416 aa15.27■□□□□ 0.04
RPAIN-206ENST00000539417 NFU1Q9UMS0 254 aa15.27■□□□□ 0.04
RPAIN-206ENST00000539417 PCDHGA8Q9Y5G5 932 aa15.27■□□□□ 0.04
RPAIN-206ENST00000539417 COMMD10Q9Y6G5 202 aa15.27■□□□□ 0.04
RPAIN-206ENST00000539417 MAP1BP46821 2468 aaKnown RBP15.27■□□□□ 0.03
RPAIN-206ENST00000539417 GSAPA4D1B5 854 aa15.27■□□□□ 0.03
RPAIN-206ENST00000539417 EFCAB7A8K855 629 aa15.27■□□□□ 0.03
RPAIN-206ENST00000539417 CDRT15L2A8MXV6 281 aa15.27■□□□□ 0.03
RPAIN-206ENST00000539417 C9orf172C9J069 976 aa15.27■□□□□ 0.03
RPAIN-206ENST00000539417 HGSO14964 777 aaPredicted RBP15.27■□□□□ 0.03
RPAIN-206ENST00000539417 VPS26AO75436 327 aa15.27■□□□□ 0.03
RPAIN-206ENST00000539417 RASSF9O75901 435 aa15.27■□□□□ 0.03
RPAIN-206ENST00000539417 DXOO77932 396 aaKnown RBP15.27■□□□□ 0.03
RPAIN-206ENST00000539417 JMJD7P0C870 316 aa15.27■□□□□ 0.03
RPAIN-206ENST00000539417 FDXRP22570 491 aa15.27■□□□□ 0.03
RPAIN-206ENST00000539417 ATP5DP30049 168 aa15.27■□□□□ 0.03
RPAIN-206ENST00000539417 PKLRP30613 574 aa15.27■□□□□ 0.03
RPAIN-206ENST00000539417 KCNAB1Q14722 419 aa15.27■□□□□ 0.03
RPAIN-206ENST00000539417 DNTTIP2Q5QJE6 756 aaKnown RBP15.27■□□□□ 0.03
RPAIN-206ENST00000539417 TRIM73Q86UV7 250 aa15.27■□□□□ 0.03
RPAIN-206ENST00000539417 SLC26A11Q86WA9 606 aa15.27■□□□□ 0.03
RPAIN-206ENST00000539417 KDF1Q8NAX2 398 aaPredicted RBP15.27■□□□□ 0.03
RPAIN-206ENST00000539417 DLG3Q92796 817 aa15.27■□□□□ 0.03
RPAIN-206ENST00000539417 USP7Q93009 1102 aa15.27■□□□□ 0.03
RPAIN-206ENST00000539417 CMKLR1Q99788 373 aa15.27■□□□□ 0.03
RPAIN-206ENST00000539417 CTRCQ99895 268 aa15.27■□□□□ 0.03
RPAIN-206ENST00000539417 CDC42EP4Q9H3Q1 356 aaKnown RBP15.27■□□□□ 0.03
RPAIN-206ENST00000539417 ZNF768Q9H5H4 540 aaKnown RBP15.27■□□□□ 0.03
RPAIN-206ENST00000539417 SIDT1Q9NXL6 827 aaKnown RBP15.27■□□□□ 0.03
RPAIN-206ENST00000539417 ACTR10Q9NZ32 417 aa15.27■□□□□ 0.03
RPAIN-206ENST00000539417 FOXJ2Q9P0K8 574 aa15.27■□□□□ 0.03
RPAIN-206ENST00000539417 IKZF3Q9UKT9 509 aa15.27■□□□□ 0.03
RPAIN-206ENST00000539417 MTO1Q9Y2Z2 717 aaKnown RBP15.27■□□□□ 0.03
RPAIN-206ENST00000539417 VWA7Q9Y334 891 aa15.27■□□□□ 0.03
RPAIN-206ENST00000539417 TPRP12270 2363 aaKnown RBP15.26■□□□□ 0.03
RPAIN-206ENST00000539417 TSPAN12O95859 305 aa15.26■□□□□ 0.03
RPAIN-206ENST00000539417 CHRM5P08912 532 aaPredicted RBP15.26■□□□□ 0.03
RPAIN-206ENST00000539417 GSTA2P09210 222 aa15.26■□□□□ 0.03
RPAIN-206ENST00000539417 FAM153BP0C7A2 387 aa15.26■□□□□ 0.03
RPAIN-206ENST00000539417 MYBL2P10244 700 aa15.26■□□□□ 0.03
RPAIN-206ENST00000539417 PVRP15151 417 aa15.26■□□□□ 0.03
RPAIN-206ENST00000539417 SAT1P21673 171 aa15.26■□□□□ 0.03
RPAIN-206ENST00000539417 PRDX3P30048 256 aaKnown RBP15.26■□□□□ 0.03
RPAIN-206ENST00000539417 CSTF2P33240 577 aaKnown RBP eCLIP15.26■□□□□ 0.03
RPAIN-206ENST00000539417 GMPRP36959 345 aa15.26■□□□□ 0.03
RPAIN-206ENST00000539417 TAS2R39P59534 338 aa15.26■□□□□ 0.03
RPAIN-206ENST00000539417 TBC1D25Q3MII6 688 aa15.26■□□□□ 0.03
RPAIN-206ENST00000539417 FAM153CQ494X1 144 aa15.26■□□□□ 0.03
RPAIN-206ENST00000539417 TEX35Q5T0J7 233 aa15.26■□□□□ 0.03
RPAIN-206ENST00000539417 CYS1Q717R9 158 aa15.26■□□□□ 0.03
RPAIN-206ENST00000539417 PRSS42Q7Z5A4 293 aa15.26■□□□□ 0.03
RPAIN-206ENST00000539417 TAX1BP1Q86VP1 789 aa15.26■□□□□ 0.03
RPAIN-206ENST00000539417 FAM129CQ86XR2 697 aa15.26■□□□□ 0.03
RPAIN-206ENST00000539417 CEP97Q8IW35 865 aa15.26■□□□□ 0.03
RPAIN-206ENST00000539417 DCUN1D3Q8IWE4 304 aa15.26■□□□□ 0.03
RPAIN-206ENST00000539417 PPM1NQ8N819 430 aa15.26■□□□□ 0.03
RPAIN-206ENST00000539417 AGBL5Q8NDL9 886 aa15.26■□□□□ 0.03
RPAIN-206ENST00000539417 KLHL6Q8WZ60 621 aa15.26■□□□□ 0.03
RPAIN-206ENST00000539417 ZDHHC12Q96GR4 267 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms