RNA–Protein interactions for RNA: ENST00000539061.5

C2CD3-213, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 2 BASIC

Gene C2CD3, Length 2,722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-213ENST00000539061 KDM4DQ6B0I6 523 aa16.89■□□□□ 0.29
C2CD3-213ENST00000539061 DNAJC14Q6Y2X3 702 aaPredicted RBP16.89■□□□□ 0.29
C2CD3-213ENST00000539061 ZDHHC21Q8IVQ6 265 aa16.89■□□□□ 0.29
C2CD3-213ENST00000539061 TEX26Q8N6G2 289 aa16.89■□□□□ 0.29
C2CD3-213ENST00000539061 CDKN2AIPNLQ96HQ2 116 aa16.89■□□□□ 0.29
C2CD3-213ENST00000539061 MROH8Q9H579 483 aa16.89■□□□□ 0.29
C2CD3-213ENST00000539061 TBC1D14Q9P2M4 693 aa16.89■□□□□ 0.29
C2CD3-213ENST00000539061 TBKBP1A7MCY6 615 aa16.89■□□□□ 0.29
C2CD3-213ENST00000539061 TNFRSF10AO00220 468 aa16.89■□□□□ 0.29
C2CD3-213ENST00000539061 NDUFS3O75489 264 aa16.89■□□□□ 0.29
C2CD3-213ENST00000539061 SLC2A4P14672 509 aa16.89■□□□□ 0.29
C2CD3-213ENST00000539061 LIPAP38571 399 aa16.89■□□□□ 0.29
C2CD3-213ENST00000539061 NRG1Q02297 640 aaPredicted RBP16.89■□□□□ 0.29
C2CD3-213ENST00000539061 ATG9BQ674R7 924 aa16.89■□□□□ 0.29
C2CD3-213ENST00000539061 TMC5Q6UXY8 1006 aa16.89■□□□□ 0.29
C2CD3-213ENST00000539061 AHSA2Q719I0 299 aa16.89■□□□□ 0.29
C2CD3-213ENST00000539061 RAVER1Q8IY67 606 aaKnown RBP16.89■□□□□ 0.29
C2CD3-213ENST00000539061 TBC1D20Q96BZ9 403 aa16.89■□□□□ 0.29
C2CD3-213ENST00000539061 PPP3R2Q96LZ3 170 aa16.89■□□□□ 0.29
C2CD3-213ENST00000539061 ZFP42Q96MM3 310 aa16.89■□□□□ 0.29
C2CD3-213ENST00000539061 CDK5RAP1Q96SZ6 601 aaKnown RBP16.89■□□□□ 0.29
C2CD3-213ENST00000539061 BARD1Q99728 777 aaKnown RBP16.89■□□□□ 0.29
C2CD3-213ENST00000539061 NXF2Q9GZY0 626 aaKnown RBP16.89■□□□□ 0.29
C2CD3-213ENST00000539061 TM9SF3Q9HD45 589 aa16.89■□□□□ 0.29
C2CD3-213ENST00000539061 CCDC177Q9NQR7 707 aaPredicted RBP16.89■□□□□ 0.29
C2CD3-213ENST00000539061 RIMKLBQ9ULI2 386 aa16.89■□□□□ 0.29
C2CD3-213ENST00000539061 NDRG4Q9ULP0 352 aaKnown RBP16.89■□□□□ 0.29
C2CD3-213ENST00000539061 KCNH4Q9UQ05 1017 aa16.89■□□□□ 0.29
C2CD3-213ENST00000539061 PDZK1P1A8MUH7 402 aa16.88■□□□□ 0.29
C2CD3-213ENST00000539061 FAM220BPB1ANY3 271 aa16.88■□□□□ 0.29
C2CD3-213ENST00000539061 FZD9O00144 591 aa16.88■□□□□ 0.29
C2CD3-213ENST00000539061 SCO2O43819 266 aa16.88■□□□□ 0.29
C2CD3-213ENST00000539061 KRT20P35900 424 aa16.88■□□□□ 0.29
C2CD3-213ENST00000539061 GGT5P36269 586 aa16.88■□□□□ 0.29
C2CD3-213ENST00000539061 LAPTM4AQ15012 233 aa16.88■□□□□ 0.29
C2CD3-213ENST00000539061 ZNF544Q6NX49 715 aa16.88■□□□□ 0.29
C2CD3-213ENST00000539061 PHACTR4Q8IZ21 702 aa16.88■□□□□ 0.29
C2CD3-213ENST00000539061 OR7G1Q8NGA0 311 aa16.88■□□□□ 0.29
C2CD3-213ENST00000539061 SCAMP5Q8TAC9 235 aa16.88■□□□□ 0.29
C2CD3-213ENST00000539061 TMEM40Q8WWA1 233 aa16.88■□□□□ 0.29
C2CD3-213ENST00000539061 PSMG2Q969U7 264 aa16.88■□□□□ 0.29
C2CD3-213ENST00000539061 RNF38Q9H0F5 515 aa16.88■□□□□ 0.29
C2CD3-213ENST00000539061 RNF6Q9Y252 685 aa16.88■□□□□ 0.29
C2CD3-213ENST00000539061 ZW10O43264 779 aa16.88■□□□□ 0.29
C2CD3-213ENST00000539061 MFN2O95140 757 aa16.88■□□□□ 0.29
C2CD3-213ENST00000539061 PIRTP0C851 137 aa16.88■□□□□ 0.29
C2CD3-213ENST00000539061 CTSKP43235 329 aa16.88■□□□□ 0.29
C2CD3-213ENST00000539061 MAGEA2P43356 314 aa16.88■□□□□ 0.29
C2CD3-213ENST00000539061 GTF2H3Q13889 308 aa16.88■□□□□ 0.29
C2CD3-213ENST00000539061 PROX2Q3B8N5 592 aa16.88■□□□□ 0.29
C2CD3-213ENST00000539061 CARD16Q5EG05 197 aa16.88■□□□□ 0.29
C2CD3-213ENST00000539061 PRR23CQ6ZRP0 262 aa16.88■□□□□ 0.29
C2CD3-213ENST00000539061 PGBD5Q8N414 524 aa16.88■□□□□ 0.29
C2CD3-213ENST00000539061 CELF2-AS1Q8N7Q2 184 aa16.88■□□□□ 0.29
C2CD3-213ENST00000539061 OR6F1Q8NGZ6 308 aa16.88■□□□□ 0.29
C2CD3-213ENST00000539061 FAM120BQ96EK7 910 aaKnown RBP16.88■□□□□ 0.29
C2CD3-213ENST00000539061 SLC10A4Q96EP9 437 aa16.88■□□□□ 0.29
C2CD3-213ENST00000539061 SIGLEC11Q96RL6 698 aa16.88■□□□□ 0.29
C2CD3-213ENST00000539061 ITM2CQ9NQX7 267 aa16.88■□□□□ 0.29
C2CD3-213ENST00000539061 C1orf109Q9NX04 203 aa16.88■□□□□ 0.29
C2CD3-213ENST00000539061 PPP2R3BQ9Y5P8 575 aa16.88■□□□□ 0.29
C2CD3-213ENST00000539061 PARNO95453 639 aaKnown RBP16.87■□□□□ 0.29
C2CD3-213ENST00000539061 IL6P05231 212 aa16.87■□□□□ 0.29
C2CD3-213ENST00000539061 SERPINF2P08697 491 aa16.87■□□□□ 0.29
C2CD3-213ENST00000539061 RPL38P63173 70 aaKnown RBP16.87■□□□□ 0.29
C2CD3-213ENST00000539061 PTGR1Q14914 329 aa16.87■□□□□ 0.29
C2CD3-213ENST00000539061 TTC23LQ6PF05 361 aa16.87■□□□□ 0.29
C2CD3-213ENST00000539061 CEP68Q76N32 757 aa16.87■□□□□ 0.29
C2CD3-213ENST00000539061 SNX20Q7Z614 316 aa16.87■□□□□ 0.29
C2CD3-213ENST00000539061 ASCC1Q8N9N2 400 aaKnown RBP16.87■□□□□ 0.29
C2CD3-213ENST00000539061 GLB1L3Q8NCI6 653 aaPredicted RBP16.87■□□□□ 0.29
C2CD3-213ENST00000539061 SEMA3CQ99985 751 aa16.87■□□□□ 0.29
C2CD3-213ENST00000539061 CDADC1Q9BWV3 514 aa16.87■□□□□ 0.29
C2CD3-213ENST00000539061 DPY30Q9C005 99 aa16.87■□□□□ 0.29
C2CD3-213ENST00000539061 REXO4Q9GZR2 422 aaKnown RBP16.87■□□□□ 0.29
C2CD3-213ENST00000539061 RASSF1Q9NS23 344 aa16.87■□□□□ 0.29
C2CD3-213ENST00000539061 CSADQ9Y600 493 aa16.87■□□□□ 0.29
C2CD3-213ENST00000539061 A0A0G2JLL6 359 aaPredicted RBP16.87■□□□□ 0.29
C2CD3-213ENST00000539061 VPS26AO75436 327 aa16.87■□□□□ 0.29
C2CD3-213ENST00000539061 SNX4O95219 450 aa16.87■□□□□ 0.29
C2CD3-213ENST00000539061 PGRP06401 933 aa16.87■□□□□ 0.29
C2CD3-213ENST00000539061 CSNK2BP67870 215 aa16.87■□□□□ 0.29
C2CD3-213ENST00000539061 GALNT3Q14435 633 aa16.87■□□□□ 0.29
C2CD3-213ENST00000539061 ABRAXAS2Q15018 415 aa16.87■□□□□ 0.29
C2CD3-213ENST00000539061 PTPRNQ16849 979 aa16.87■□□□□ 0.29
C2CD3-213ENST00000539061 SPANXN4Q5MJ08 99 aa16.87■□□□□ 0.29
C2CD3-213ENST00000539061 OR2T5Q6IEZ7 315 aa16.87■□□□□ 0.29
C2CD3-213ENST00000539061 PRRT2Q7Z6L0 340 aaPredicted RBP16.87■□□□□ 0.29
C2CD3-213ENST00000539061 OR10Q1Q8NGQ4 319 aa16.87■□□□□ 0.29
C2CD3-213ENST00000539061 OR2T29Q8NH02 315 aa16.87■□□□□ 0.29
C2CD3-213ENST00000539061 DDX28Q9NUL7 540 aaKnown RBP16.87■□□□□ 0.29
C2CD3-213ENST00000539061 TRMT6Q9UJA5 497 aaKnown RBP16.87■□□□□ 0.29
C2CD3-213ENST00000539061 MKLN1Q9UL63 735 aa16.87■□□□□ 0.29
C2CD3-213ENST00000539061 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.87■□□□□ 0.29
C2CD3-213ENST00000539061 PCDHGB6Q9Y5F9 930 aa16.87■□□□□ 0.29
C2CD3-213ENST00000539061 LTBP3Q9NS15 1303 aa16.87■□□□□ 0.29
C2CD3-213ENST00000539061 PNMA8CA0A1B0GUJ8 204 aa16.86■□□□□ 0.29
C2CD3-213ENST00000539061 SMIM35A0A1B0GVV1 85 aa16.86■□□□□ 0.29
C2CD3-213ENST00000539061 EVPLLA8MZ36 301 aa16.86■□□□□ 0.29
C2CD3-213ENST00000539061 MYO1GB0I1T2 1018 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms