RNA–Protein interactions for RNA: ENST00000538596.6

CPNE8-203, Transcript of copine 8, humanhuman

TSL 1 (best) BASIC

Gene CPNE8, Length 2,875 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-203ENST00000538596 LAIR2Q6ISS4 152 aa11.7□□□□□ -0.54
CPNE8-203ENST00000538596 CERS6Q6ZMG9 384 aa11.7□□□□□ -0.54
CPNE8-203ENST00000538596 SNX20Q7Z614 316 aa11.7□□□□□ -0.54
CPNE8-203ENST00000538596 NPAS4Q8IUM7 802 aa11.7□□□□□ -0.54
CPNE8-203ENST00000538596 GFM2Q969S9 779 aaKnown RBP11.7□□□□□ -0.54
CPNE8-203ENST00000538596 ULK4Q96C45 1275 aa11.7□□□□□ -0.54
CPNE8-203ENST00000538596 ALG14Q96F25 216 aa11.7□□□□□ -0.54
CPNE8-203ENST00000538596 SCLYQ96I15 445 aa11.7□□□□□ -0.54
CPNE8-203ENST00000538596 UGT2B28Q9BY64 529 aa11.7□□□□□ -0.54
CPNE8-203ENST00000538596 MTRRQ9UBK8 725 aa11.7□□□□□ -0.54
CPNE8-203ENST00000538596 ANAPC1Q9H1A4 1944 aa11.7□□□□□ -0.54
CPNE8-203ENST00000538596 UPK3BL1B0FP48 263 aa11.7□□□□□ -0.54
CPNE8-203ENST00000538596 UPK3BL2E5RIL1 263 aa11.7□□□□□ -0.54
CPNE8-203ENST00000538596 J3QRK9 145 aa11.7□□□□□ -0.54
CPNE8-203ENST00000538596 HS6ST1O60243 411 aa11.7□□□□□ -0.54
CPNE8-203ENST00000538596 MAN1A2O60476 641 aa11.7□□□□□ -0.54
CPNE8-203ENST00000538596 BCKDHAP12694 445 aa11.7□□□□□ -0.54
CPNE8-203ENST00000538596 PFKLP17858 780 aa11.7□□□□□ -0.54
CPNE8-203ENST00000538596 DGKAP23743 735 aa11.7□□□□□ -0.54
CPNE8-203ENST00000538596 TACR1P25103 407 aa11.7□□□□□ -0.54
CPNE8-203ENST00000538596 MAP4P27816 1152 aaKnown RBP11.7□□□□□ -0.54
CPNE8-203ENST00000538596 MLLT10P55197 1068 aa11.7□□□□□ -0.54
CPNE8-203ENST00000538596 TPD52P55327 224 aaPredicted RBP11.7□□□□□ -0.54
CPNE8-203ENST00000538596 ELAVL2Q12926 359 aaKnown RBP11.7□□□□□ -0.54
CPNE8-203ENST00000538596 INO80DQ53TQ3 878 aaPredicted RBP11.7□□□□□ -0.54
CPNE8-203ENST00000538596 RUNDC3AQ59EK9 446 aa11.7□□□□□ -0.54
CPNE8-203ENST00000538596 KIAA1841Q6NSI8 718 aa11.7□□□□□ -0.54
CPNE8-203ENST00000538596 C8orf59Q8N0T1 100 aaPredicted RBP11.7□□□□□ -0.54
CPNE8-203ENST00000538596 RNF175Q8N4F7 328 aa11.7□□□□□ -0.54
CPNE8-203ENST00000538596 ARL14EPQ8N8R7 260 aaPredicted RBP11.7□□□□□ -0.54
CPNE8-203ENST00000538596 LEMD2Q8NC56 503 aa11.7□□□□□ -0.54
CPNE8-203ENST00000538596 CHDHQ8NE62 594 aaPredicted RBP11.7□□□□□ -0.54
CPNE8-203ENST00000538596 FBXL8Q96CD0 374 aa11.7□□□□□ -0.54
CPNE8-203ENST00000538596 CCDC115Q96NT0 180 aa11.7□□□□□ -0.54
CPNE8-203ENST00000538596 OSBPL10Q9BXB5 764 aa11.7□□□□□ -0.54
CPNE8-203ENST00000538596 DGCR6LQ9BY27 220 aa11.7□□□□□ -0.54
CPNE8-203ENST00000538596 ACPTQ9BZG2 426 aa11.7□□□□□ -0.54
CPNE8-203ENST00000538596 CLMPQ9H6B4 373 aa11.7□□□□□ -0.54
CPNE8-203ENST00000538596 ELAC1Q9H777 363 aaKnown RBP11.7□□□□□ -0.54
CPNE8-203ENST00000538596 TMEM45AQ9NWC5 275 aa11.7□□□□□ -0.54
CPNE8-203ENST00000538596 DNAJB9Q9UBS3 223 aa11.7□□□□□ -0.54
CPNE8-203ENST00000538596 FBXO10Q9UK96 956 aa11.7□□□□□ -0.54
CPNE8-203ENST00000538596 GLYATL1P3A0A0U1RQE8 302 aa11.69□□□□□ -0.54
CPNE8-203ENST00000538596 PTGES3LE9PB15 166 aa11.69□□□□□ -0.54
CPNE8-203ENST00000538596 K7EPI3 171 aa11.69□□□□□ -0.54
CPNE8-203ENST00000538596 SERPINA1P01009 418 aa11.69□□□□□ -0.54
CPNE8-203ENST00000538596 PDYNP01213 254 aa11.69□□□□□ -0.54
CPNE8-203ENST00000538596 TRBC1P01850 177 aa11.69□□□□□ -0.54
CPNE8-203ENST00000538596 EPORP19235 508 aa11.69□□□□□ -0.54
CPNE8-203ENST00000538596 ITGALP20701 1170 aa11.69□□□□□ -0.54
CPNE8-203ENST00000538596 CDKN2CP42773 168 aa11.69□□□□□ -0.54
CPNE8-203ENST00000538596 PSMD7P51665 324 aa11.69□□□□□ -0.54
CPNE8-203ENST00000538596 PPP2R2BQ00005 443 aa11.69□□□□□ -0.54
CPNE8-203ENST00000538596 CD47Q08722 323 aa11.69□□□□□ -0.54
CPNE8-203ENST00000538596 BFSP2Q13515 415 aa11.69□□□□□ -0.54
CPNE8-203ENST00000538596 USP39Q53GS9 565 aaKnown RBP11.69□□□□□ -0.54
CPNE8-203ENST00000538596 LRRC73Q5JTD7 316 aa11.69□□□□□ -0.54
CPNE8-203ENST00000538596 CACHD1Q5VU97 1274 aa11.69□□□□□ -0.54
CPNE8-203ENST00000538596 BROXQ5VW32 411 aa11.69□□□□□ -0.54
CPNE8-203ENST00000538596 TXNDC8Q6A555 127 aa11.69□□□□□ -0.54
CPNE8-203ENST00000538596 PRR23BQ6ZRT6 265 aa11.69□□□□□ -0.54
CPNE8-203ENST00000538596 TMEM150AQ86TG1 271 aa11.69□□□□□ -0.54
CPNE8-203ENST00000538596 SPARTQ8N0X7 666 aa11.69□□□□□ -0.54
CPNE8-203ENST00000538596 ADAMTS19Q8TE59 1207 aa11.69□□□□□ -0.54
CPNE8-203ENST00000538596 PYCR2Q96C36 320 aa11.69□□□□□ -0.54
CPNE8-203ENST00000538596 SDCCAG3Q96C92 435 aa11.69□□□□□ -0.54
CPNE8-203ENST00000538596 EGLN2Q96KS0 407 aa11.69□□□□□ -0.54
CPNE8-203ENST00000538596 TSSK3Q96PN8 268 aa11.69□□□□□ -0.54
CPNE8-203ENST00000538596 YTHDF1Q9BYJ9 559 aaKnown RBP11.69□□□□□ -0.54
CPNE8-203ENST00000538596 RETREG1Q9H6L5 497 aa11.69□□□□□ -0.54
CPNE8-203ENST00000538596 IFRD1O00458 451 aaPredicted RBP11.69□□□□□ -0.54
CPNE8-203ENST00000538596 MITFO75030 526 aaPredicted RBP11.69□□□□□ -0.54
CPNE8-203ENST00000538596 XYLBO75191 536 aa11.69□□□□□ -0.54
CPNE8-203ENST00000538596 CREG1O75629 220 aa11.69□□□□□ -0.54
CPNE8-203ENST00000538596 SEC14L2O76054 403 aa11.69□□□□□ -0.54
CPNE8-203ENST00000538596 COL6A1P12109 1028 aa11.69□□□□□ -0.54
CPNE8-203ENST00000538596 EPB42P16452 691 aa11.69□□□□□ -0.54
CPNE8-203ENST00000538596 TTKP33981 857 aa11.69□□□□□ -0.54
CPNE8-203ENST00000538596 PLA2G16P53816 162 aa11.69□□□□□ -0.54
CPNE8-203ENST00000538596 BCL2L1Q07817 233 aa11.69□□□□□ -0.54
CPNE8-203ENST00000538596 SLC14A1Q13336 389 aa11.69□□□□□ -0.54
CPNE8-203ENST00000538596 CDKN3Q16667 212 aa11.69□□□□□ -0.54
CPNE8-203ENST00000538596 DPY19L1Q2PZI1 675 aa11.69□□□□□ -0.54
CPNE8-203ENST00000538596 LDLRAP1Q5SW96 308 aa11.69□□□□□ -0.54
CPNE8-203ENST00000538596 DET1Q7L5Y6 550 aa11.69□□□□□ -0.54
CPNE8-203ENST00000538596 GALNT10Q86SR1 603 aa11.69□□□□□ -0.54
CPNE8-203ENST00000538596 GPR26Q8NDV2 337 aa11.69□□□□□ -0.54
CPNE8-203ENST00000538596 GIPC3Q8TF64 312 aa11.69□□□□□ -0.54
CPNE8-203ENST00000538596 BARD1Q99728 777 aaKnown RBP11.69□□□□□ -0.54
CPNE8-203ENST00000538596 KAT8Q9H7Z6 458 aaKnown RBP11.69□□□□□ -0.54
CPNE8-203ENST00000538596 VNN3Q9NY84 501 aa11.69□□□□□ -0.54
CPNE8-203ENST00000538596 YIPF1Q9Y548 306 aa11.69□□□□□ -0.54
CPNE8-203ENST00000538596 CORINQ9Y5Q5 1042 aa11.69□□□□□ -0.54
CPNE8-203ENST00000538596 SCN5AQ14524 2016 aa11.69□□□□□ -0.54
CPNE8-203ENST00000538596 NPIPB15A6NHN6 443 aaPredicted RBP11.69□□□□□ -0.54
CPNE8-203ENST00000538596 ABCB7O75027 752 aa11.69□□□□□ -0.54
CPNE8-203ENST00000538596 E2F6O75461 281 aa11.69□□□□□ -0.54
CPNE8-203ENST00000538596 IL6P05231 212 aa11.69□□□□□ -0.54
CPNE8-203ENST00000538596 CCNA2P20248 432 aa11.69□□□□□ -0.54
CPNE8-203ENST00000538596 RPS3P23396 243 aaKnown RBP eCLIP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms