RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 AHSA2Q719I0 299 aa18.22■□□□□ 0.51
SFSWAP-207ENST00000538548 NLGN4XQ8N0W4 816 aa18.22■□□□□ 0.51
SFSWAP-207ENST00000538548 SIMC1Q8NDZ2 872 aa18.22■□□□□ 0.51
SFSWAP-207ENST00000538548 RASSF5Q8WWW0 418 aa18.22■□□□□ 0.51
SFSWAP-207ENST00000538548 PYURFQ96I23 114 aa18.22■□□□□ 0.51
SFSWAP-207ENST00000538548 ZBTB18Q99592 522 aa18.22■□□□□ 0.51
SFSWAP-207ENST00000538548 C16orf70Q9BSU1 422 aa18.22■□□□□ 0.51
SFSWAP-207ENST00000538548 REXO4Q9GZR2 422 aaKnown RBP18.22■□□□□ 0.51
SFSWAP-207ENST00000538548 UXTQ9UBK9 157 aaPredicted RBP18.22■□□□□ 0.51
SFSWAP-207ENST00000538548 RAPGEFL1Q9UHV5 662 aa18.22■□□□□ 0.51
SFSWAP-207ENST00000538548 WBP11Q9Y2W2 641 aaKnown RBP18.22■□□□□ 0.51
SFSWAP-207ENST00000538548 MED16Q9Y2X0 877 aa18.22■□□□□ 0.51
SFSWAP-207ENST00000538548 CAB39Q9Y376 341 aaPredicted RBP18.22■□□□□ 0.51
SFSWAP-207ENST00000538548 PEX16Q9Y5Y5 336 aa18.22■□□□□ 0.51
SFSWAP-207ENST00000538548 CSADQ9Y600 493 aa18.22■□□□□ 0.51
SFSWAP-207ENST00000538548 H3BRB1 525 aa18.22■□□□□ 0.51
SFSWAP-207ENST00000538548 SLC25A27O95847 323 aa18.22■□□□□ 0.51
SFSWAP-207ENST00000538548 SERPINF2P08697 491 aa18.22■□□□□ 0.51
SFSWAP-207ENST00000538548 ARHGDIAP52565 204 aa18.22■□□□□ 0.51
SFSWAP-207ENST00000538548 ERVPABLB-1P60509 514 aa18.22■□□□□ 0.51
SFSWAP-207ENST00000538548 TYSND1Q2T9J0 566 aa18.22■□□□□ 0.51
SFSWAP-207ENST00000538548 MARC1Q5VT66 337 aa18.22■□□□□ 0.51
SFSWAP-207ENST00000538548 IL27RAQ6UWB1 636 aa18.22■□□□□ 0.51
SFSWAP-207ENST00000538548 UTS2BQ765I0 119 aa18.22■□□□□ 0.51
SFSWAP-207ENST00000538548 MSRB3Q8IXL7 192 aa18.22■□□□□ 0.51
SFSWAP-207ENST00000538548 UBQLNLQ8IYU4 475 aa18.22■□□□□ 0.51
SFSWAP-207ENST00000538548 TTC29Q8NA56 475 aaPredicted RBP18.22■□□□□ 0.51
SFSWAP-207ENST00000538548 OR52B6Q8NGF0 335 aa18.22■□□□□ 0.51
SFSWAP-207ENST00000538548 OR4L1Q8NH43 312 aa18.22■□□□□ 0.51
SFSWAP-207ENST00000538548 ESAMQ96AP7 390 aa18.22■□□□□ 0.51
SFSWAP-207ENST00000538548 SMARCD1Q96GM5 515 aa18.22■□□□□ 0.51
SFSWAP-207ENST00000538548 SLC25A37Q9NYZ2 338 aa18.22■□□□□ 0.51
SFSWAP-207ENST00000538548 EIF2B4Q9UI10 523 aaKnown RBP18.22■□□□□ 0.51
SFSWAP-207ENST00000538548 PNMA8CA0A1B0GUJ8 204 aa18.21■□□□□ 0.51
SFSWAP-207ENST00000538548 CENPXA8MT69 81 aa18.21■□□□□ 0.51
SFSWAP-207ENST00000538548 SLC10A7Q0GE19 358 aa18.21■□□□□ 0.51
SFSWAP-207ENST00000538548 PTPRCAPQ14761 206 aa18.21■□□□□ 0.51
SFSWAP-207ENST00000538548 AP5B1Q2VPB7 878 aa18.21■□□□□ 0.51
SFSWAP-207ENST00000538548 CCDC58Q4VC31 144 aa18.21■□□□□ 0.51
SFSWAP-207ENST00000538548 KBTBD8Q8NFY9 601 aa18.21■□□□□ 0.51
SFSWAP-207ENST00000538548 METTL6Q8TCB7 284 aa18.21■□□□□ 0.51
SFSWAP-207ENST00000538548 CDCA5Q96FF9 252 aa18.21■□□□□ 0.51
SFSWAP-207ENST00000538548 CDK15Q96Q40 435 aa18.21■□□□□ 0.51
SFSWAP-207ENST00000538548 DEPDC7Q96QD5 511 aa18.21■□□□□ 0.51
SFSWAP-207ENST00000538548 BARD1Q99728 777 aaKnown RBP18.21■□□□□ 0.51
SFSWAP-207ENST00000538548 NUAK2Q9H093 628 aa18.21■□□□□ 0.51
SFSWAP-207ENST00000538548 AGO3Q9H9G7 860 aaKnown RBP18.21■□□□□ 0.51
SFSWAP-207ENST00000538548 EHD3Q9NZN3 535 aa18.21■□□□□ 0.51
SFSWAP-207ENST00000538548 MPP6Q9NZW5 540 aa18.21■□□□□ 0.51
SFSWAP-207ENST00000538548 ARL5AQ9Y689 179 aa18.21■□□□□ 0.51
SFSWAP-207ENST00000538548 LOC285095A0A1B0GVY8 99 aa18.21■□□□□ 0.51
SFSWAP-207ENST00000538548 UBA6A0AVT1 1052 aaPredicted RBP18.21■□□□□ 0.51
SFSWAP-207ENST00000538548 GADD45AP24522 165 aa18.21■□□□□ 0.51
SFSWAP-207ENST00000538548 ETV6P41212 452 aa18.21■□□□□ 0.51
SFSWAP-207ENST00000538548 HTR6P50406 440 aa18.21■□□□□ 0.51
SFSWAP-207ENST00000538548 GNG2P59768 71 aa18.21■□□□□ 0.51
SFSWAP-207ENST00000538548 RFTN2Q52LD8 501 aaPredicted RBP18.21■□□□□ 0.51
SFSWAP-207ENST00000538548 RUNDC3AQ59EK9 446 aa18.21■□□□□ 0.51
SFSWAP-207ENST00000538548 LETMD1Q6P1Q0 360 aa18.21■□□□□ 0.51
SFSWAP-207ENST00000538548 SNX20Q7Z614 316 aa18.21■□□□□ 0.51
SFSWAP-207ENST00000538548 NKAPQ8N5F7 415 aaKnown RBP18.21■□□□□ 0.51
SFSWAP-207ENST00000538548 PPTC7Q8NI37 304 aa18.21■□□□□ 0.51
SFSWAP-207ENST00000538548 NETO1Q8TDF5 533 aa18.21■□□□□ 0.51
SFSWAP-207ENST00000538548 QPCTLQ9NXS2 382 aa18.21■□□□□ 0.51
SFSWAP-207ENST00000538548 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP18.21■□□□□ 0.51
SFSWAP-207ENST00000538548 ASB1Q9Y576 335 aa18.21■□□□□ 0.51
SFSWAP-207ENST00000538548 FAM220BPB1ANY3 271 aa18.2■□□□□ 0.5
SFSWAP-207ENST00000538548 SEC22BO75396 215 aa18.2■□□□□ 0.5
SFSWAP-207ENST00000538548 CAPN1P07384 714 aa18.2■□□□□ 0.5
SFSWAP-207ENST00000538548 PCBP1Q15365 356 aaKnown RBP eCLIP18.2■□□□□ 0.5
SFSWAP-207ENST00000538548 GCNT7Q6ZNI0 430 aa18.2■□□□□ 0.5
SFSWAP-207ENST00000538548 CEP68Q76N32 757 aa18.2■□□□□ 0.5
SFSWAP-207ENST00000538548 GATAD2AQ86YP4 633 aa18.2■□□□□ 0.5
SFSWAP-207ENST00000538548 ZDHHC21Q8IVQ6 265 aa18.2■□□□□ 0.5
SFSWAP-207ENST00000538548 BLOC1S5Q8TDH9 187 aa18.2■□□□□ 0.5
SFSWAP-207ENST00000538548 FATE1Q969F0 183 aa18.2■□□□□ 0.5
SFSWAP-207ENST00000538548 KLHL5Q96PQ7 755 aa18.2■□□□□ 0.5
SFSWAP-207ENST00000538548 OSMRQ99650 979 aa18.2■□□□□ 0.5
SFSWAP-207ENST00000538548 FNIP2Q9P278 1114 aa18.2■□□□□ 0.5
SFSWAP-207ENST00000538548 HECAQ9UBI9 543 aaPredicted RBP18.2■□□□□ 0.5
SFSWAP-207ENST00000538548 E9PAM4 449 aa18.2■□□□□ 0.5
SFSWAP-207ENST00000538548 CNMDO75829 334 aa18.2■□□□□ 0.5
SFSWAP-207ENST00000538548 LHX1P48742 406 aa18.2■□□□□ 0.5
SFSWAP-207ENST00000538548 CSNK2BP67870 215 aa18.2■□□□□ 0.5
SFSWAP-207ENST00000538548 LAPTM4AQ15012 233 aa18.2■□□□□ 0.5
SFSWAP-207ENST00000538548 FAM174BQ3ZCQ3 159 aa18.2■□□□□ 0.5
SFSWAP-207ENST00000538548 CARD16Q5EG05 197 aa18.2■□□□□ 0.5
SFSWAP-207ENST00000538548 SPANXN2Q5MJ10 180 aa18.2■□□□□ 0.5
SFSWAP-207ENST00000538548 KIAA1614Q5VZ46 1190 aa18.2■□□□□ 0.5
SFSWAP-207ENST00000538548 ATG9BQ674R7 924 aa18.2■□□□□ 0.5
SFSWAP-207ENST00000538548 OR13C4Q8NGS5 318 aa18.2■□□□□ 0.5
SFSWAP-207ENST00000538548 MED30Q96HR3 178 aa18.2■□□□□ 0.5
SFSWAP-207ENST00000538548 HBEGFQ99075 208 aa18.2■□□□□ 0.5
SFSWAP-207ENST00000538548 TRIM62Q9BVG3 475 aa18.2■□□□□ 0.5
SFSWAP-207ENST00000538548 M0R082 166 aa18.19■□□□□ 0.5
SFSWAP-207ENST00000538548 GPR32O75388 356 aa18.19■□□□□ 0.5
SFSWAP-207ENST00000538548 WBP4O75554 376 aaKnown RBP18.19■□□□□ 0.5
SFSWAP-207ENST00000538548 ITGB6P18564 788 aa18.19■□□□□ 0.5
SFSWAP-207ENST00000538548 FMO4P31512 558 aa18.19■□□□□ 0.5
SFSWAP-207ENST00000538548 DDOSTP39656 456 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms