RNA–Protein interactions for RNA: ENST00000538333.3

LIMK1-208, Transcript of LIM domain kinase 1, humanhuman

TSL 2 BASIC

Gene LIMK1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-208ENST00000538333 CYP2A6P11509 494 aaPredicted RBP13.69□□□□□ -0.22
LIMK1-208ENST00000538333 TCF3P15923 654 aa13.69□□□□□ -0.22
LIMK1-208ENST00000538333 AKT1P31749 480 aa13.69□□□□□ -0.22
LIMK1-208ENST00000538333 SP140Q13342 867 aa13.69□□□□□ -0.22
LIMK1-208ENST00000538333 CNPY1Q3B7I2 92 aa13.69□□□□□ -0.22
LIMK1-208ENST00000538333 USP39Q53GS9 565 aaKnown RBP13.69□□□□□ -0.22
LIMK1-208ENST00000538333 SGO1Q5FBB7 561 aa13.69□□□□□ -0.22
LIMK1-208ENST00000538333 IYDQ6PHW0 289 aa13.69□□□□□ -0.22
LIMK1-208ENST00000538333 Q6ZVL8 140 aa13.69□□□□□ -0.22
LIMK1-208ENST00000538333 RALGPS2Q86X27 583 aaPredicted RBP13.69□□□□□ -0.22
LIMK1-208ENST00000538333 CBR4Q8N4T8 237 aa13.69□□□□□ -0.22
LIMK1-208ENST00000538333 NAT16Q8N8M0 369 aa13.69□□□□□ -0.22
LIMK1-208ENST00000538333 GLB1L3Q8NCI6 653 aaPredicted RBP13.69□□□□□ -0.22
LIMK1-208ENST00000538333 OR8J3Q8NGG0 315 aa13.69□□□□□ -0.22
LIMK1-208ENST00000538333 SPPL3Q8TCT6 385 aa13.69□□□□□ -0.22
LIMK1-208ENST00000538333 CYB5D2Q8WUJ1 264 aa13.69□□□□□ -0.22
LIMK1-208ENST00000538333 POF1BQ8WVV4 589 aa13.69□□□□□ -0.22
LIMK1-208ENST00000538333 GTF2H4Q92759 462 aa13.69□□□□□ -0.22
LIMK1-208ENST00000538333 MRPS26Q9BYN8 205 aaKnown RBP13.69□□□□□ -0.22
LIMK1-208ENST00000538333 ANKRD60Q9BZ19 345 aa13.69□□□□□ -0.22
LIMK1-208ENST00000538333 FAM83DQ9H4H8 585 aa13.69□□□□□ -0.22
LIMK1-208ENST00000538333 CLMPQ9H6B4 373 aa13.69□□□□□ -0.22
LIMK1-208ENST00000538333 ACTR8Q9H981 624 aa13.69□□□□□ -0.22
LIMK1-208ENST00000538333 ZFP14Q9HCL3 533 aa13.69□□□□□ -0.22
LIMK1-208ENST00000538333 C1orf109Q9NX04 203 aa13.69□□□□□ -0.22
LIMK1-208ENST00000538333 NFKBIL1Q9UBC1 381 aaPredicted RBP13.69□□□□□ -0.22
LIMK1-208ENST00000538333 ZNHIT2Q9UHR6 403 aa13.69□□□□□ -0.22
LIMK1-208ENST00000538333 ANAPC2Q9UJX6 822 aa13.69□□□□□ -0.22
LIMK1-208ENST00000538333 KANSL1LA0AUZ9 987 aa13.68□□□□□ -0.22
LIMK1-208ENST00000538333 AHCYL1O43865 530 aa13.68□□□□□ -0.22
LIMK1-208ENST00000538333 SEC22BO75396 215 aa13.68□□□□□ -0.22
LIMK1-208ENST00000538333 CLPTM1O96005 669 aa13.68□□□□□ -0.22
LIMK1-208ENST00000538333 KRT6AP02538 564 aa13.68□□□□□ -0.22
LIMK1-208ENST00000538333 FGBP02675 491 aa13.68□□□□□ -0.22
LIMK1-208ENST00000538333 KRT6BP04259 564 aa13.68□□□□□ -0.22
LIMK1-208ENST00000538333 FCGR1AP12314 374 aa13.68□□□□□ -0.22
LIMK1-208ENST00000538333 TIMP2P16035 220 aa13.68□□□□□ -0.22
LIMK1-208ENST00000538333 POLR2EP19388 210 aaKnown RBP13.68□□□□□ -0.22
LIMK1-208ENST00000538333 HOXA9P31269 272 aa13.68□□□□□ -0.22
LIMK1-208ENST00000538333 CTNNB1P35222 781 aa13.68□□□□□ -0.22
LIMK1-208ENST00000538333 SOX11P35716 441 aa13.68□□□□□ -0.22
LIMK1-208ENST00000538333 RPL5P46777 297 aaKnown RBP13.68□□□□□ -0.22
LIMK1-208ENST00000538333 KRT6CP48668 564 aa13.68□□□□□ -0.22
LIMK1-208ENST00000538333 HNMTP50135 292 aa13.68□□□□□ -0.22
LIMK1-208ENST00000538333 BOP1Q14137 746 aaKnown RBP13.68□□□□□ -0.22
LIMK1-208ENST00000538333 ATP6AP1Q15904 470 aa13.68□□□□□ -0.22
LIMK1-208ENST00000538333 CPSF6Q16630 551 aaKnown RBP eCLIP13.68□□□□□ -0.22
LIMK1-208ENST00000538333 IMPG1Q17R60 797 aa13.68□□□□□ -0.22
LIMK1-208ENST00000538333 PTCHD3Q3KNS1 767 aa13.68□□□□□ -0.22
LIMK1-208ENST00000538333 FAM174BQ3ZCQ3 159 aa13.68□□□□□ -0.22
LIMK1-208ENST00000538333 ARSIQ5FYB1 569 aa13.68□□□□□ -0.22
LIMK1-208ENST00000538333 HENMT1Q5T8I9 393 aaKnown RBP13.68□□□□□ -0.22
LIMK1-208ENST00000538333 NEK5Q6P3R8 708 aa13.68□□□□□ -0.22
LIMK1-208ENST00000538333 DTWD1Q8N5C7 304 aa13.68□□□□□ -0.22
LIMK1-208ENST00000538333 TFAP2CQ92754 450 aa13.68□□□□□ -0.22
LIMK1-208ENST00000538333 ARMC5Q96C12 935 aa13.68□□□□□ -0.22
LIMK1-208ENST00000538333 BIRC7Q96CA5 298 aa13.68□□□□□ -0.22
LIMK1-208ENST00000538333 OTUB2Q96DC9 234 aa13.68□□□□□ -0.22
LIMK1-208ENST00000538333 PRPF18Q99633 342 aaKnown RBP13.68□□□□□ -0.22
LIMK1-208ENST00000538333 P2RY13Q9BPV8 354 aa13.68□□□□□ -0.22
LIMK1-208ENST00000538333 DPY30Q9C005 99 aa13.68□□□□□ -0.22
LIMK1-208ENST00000538333 PIF1Q9H611 641 aa13.68□□□□□ -0.22
LIMK1-208ENST00000538333 PCDH12Q9NPG4 1184 aa13.68□□□□□ -0.22
LIMK1-208ENST00000538333 SMIM31A0A1B0GVY4 71 aa13.68□□□□□ -0.22
LIMK1-208ENST00000538333 UPK3BL1B0FP48 263 aa13.68□□□□□ -0.22
LIMK1-208ENST00000538333 UPK3BL2E5RIL1 263 aa13.68□□□□□ -0.22
LIMK1-208ENST00000538333 PDLIM1O00151 329 aa13.68□□□□□ -0.22
LIMK1-208ENST00000538333 PLOD2O00469 737 aa13.68□□□□□ -0.22
LIMK1-208ENST00000538333 SLC16A5O15375 505 aa13.68□□□□□ -0.22
LIMK1-208ENST00000538333 DFNA5O60443 496 aa13.68□□□□□ -0.22
LIMK1-208ENST00000538333 PRAMEF4O60810 478 aa13.68□□□□□ -0.22
LIMK1-208ENST00000538333 KCNH1O95259 989 aa13.68□□□□□ -0.22
LIMK1-208ENST00000538333 PDYNP01213 254 aa13.68□□□□□ -0.22
LIMK1-208ENST00000538333 EPCAMP16422 314 aa13.68□□□□□ -0.22
LIMK1-208ENST00000538333 ETV3P41162 512 aa13.68□□□□□ -0.22
LIMK1-208ENST00000538333 SPANXN4Q5MJ08 99 aa13.68□□□□□ -0.22
LIMK1-208ENST00000538333 CACHD1Q5VU97 1274 aa13.68□□□□□ -0.22
LIMK1-208ENST00000538333 PRAMEF9Q5VWM5 478 aa13.68□□□□□ -0.22
LIMK1-208ENST00000538333 GLYATQ6IB77 296 aa13.68□□□□□ -0.22
LIMK1-208ENST00000538333 NEK10Q6ZWH5 1172 aa13.68□□□□□ -0.22
LIMK1-208ENST00000538333 SPRED1Q7Z699 444 aa13.68□□□□□ -0.22
LIMK1-208ENST00000538333 TBC1D21Q8IYX1 336 aa13.68□□□□□ -0.22
LIMK1-208ENST00000538333 KRTCAP2Q8N6L1 136 aa13.68□□□□□ -0.22
LIMK1-208ENST00000538333 METTL25Q8N6Q8 603 aa13.68□□□□□ -0.22
LIMK1-208ENST00000538333 L3MBTL4Q8NA19 623 aa13.68□□□□□ -0.22
LIMK1-208ENST00000538333 DDHD1Q8NEL9 900 aa13.68□□□□□ -0.22
LIMK1-208ENST00000538333 NCSTNQ92542 709 aa13.68□□□□□ -0.22
LIMK1-208ENST00000538333 ZNF583Q96ND8 569 aa13.68□□□□□ -0.22
LIMK1-208ENST00000538333 ZBTB18Q99592 522 aa13.68□□□□□ -0.22
LIMK1-208ENST00000538333 MAGEL2Q9UJ55 1249 aa13.68□□□□□ -0.22
LIMK1-208ENST00000538333 FBXO10Q9UK96 956 aa13.68□□□□□ -0.22
LIMK1-208ENST00000538333 PADI4Q9UM07 663 aa13.68□□□□□ -0.22
LIMK1-208ENST00000538333 OAZ3Q9UMX2 235 aa13.68□□□□□ -0.22
LIMK1-208ENST00000538333 CHD7Q9P2D1 2997 aa13.67□□□□□ -0.22
LIMK1-208ENST00000538333 A0A1B0GTW7 788 aa13.67□□□□□ -0.22
LIMK1-208ENST00000538333 ENO4A6NNW6 628 aa13.67□□□□□ -0.22
LIMK1-208ENST00000538333 FADS2P1A8MWK0 482 aa13.67□□□□□ -0.22
LIMK1-208ENST00000538333 AREL1O15033 823 aa13.67□□□□□ -0.22
LIMK1-208ENST00000538333 KPNA5O15131 536 aa13.67□□□□□ -0.22
LIMK1-208ENST00000538333 AP2A2O94973 939 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms