RNA–Protein interactions for RNA: ENST00000537981.5

RTN3-208, Transcript of reticulon 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN3, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-208ENST00000537981 SPANXN3Q5MJ09 141 aa10.48□□□□□ -0.73
RTN3-208ENST00000537981 OR6B2Q6IFH4 312 aa10.48□□□□□ -0.73
RTN3-208ENST00000537981 TYW3Q6IPR3 259 aaKnown RBP10.48□□□□□ -0.73
RTN3-208ENST00000537981 PRR5LQ6MZQ0 368 aa10.48□□□□□ -0.73
RTN3-208ENST00000537981 ZNF600Q6ZNG1 722 aa10.48□□□□□ -0.73
RTN3-208ENST00000537981 Q6ZPB1 254 aaPredicted RBP10.48□□□□□ -0.73
RTN3-208ENST00000537981 OTOP2Q7RTS6 562 aa10.48□□□□□ -0.73
RTN3-208ENST00000537981 C16orf62Q7Z3J2 963 aa10.48□□□□□ -0.73
RTN3-208ENST00000537981 FAM160B2Q86V87 743 aa10.48□□□□□ -0.73
RTN3-208ENST00000537981 COMMD7Q86VX2 200 aa10.48□□□□□ -0.73
RTN3-208ENST00000537981 ZNF567Q8N184 647 aa10.48□□□□□ -0.73
RTN3-208ENST00000537981 ANKRD53Q8N9V6 530 aa10.48□□□□□ -0.73
RTN3-208ENST00000537981 OR10T2Q8NGX3 314 aa10.48□□□□□ -0.73
RTN3-208ENST00000537981 VANGL1Q8TAA9 524 aaPredicted RBP10.48□□□□□ -0.73
RTN3-208ENST00000537981 SLC38A4Q969I6 547 aa10.48□□□□□ -0.73
RTN3-208ENST00000537981 NSMCE2Q96MF7 247 aa10.48□□□□□ -0.73
RTN3-208ENST00000537981 PPM1MQ96MI6 270 aa10.48□□□□□ -0.73
RTN3-208ENST00000537981 RBCK1Q9BYM8 510 aa10.48□□□□□ -0.73
RTN3-208ENST00000537981 ZNF518BQ9C0D4 1074 aa10.48□□□□□ -0.73
RTN3-208ENST00000537981 PPIL3Q9H2H8 161 aaKnown RBP10.48□□□□□ -0.73
RTN3-208ENST00000537981 TUBB1Q9H4B7 451 aa10.48□□□□□ -0.73
RTN3-208ENST00000537981 CATSPERBQ9H7T0 1116 aa10.48□□□□□ -0.73
RTN3-208ENST00000537981 ZC4H2Q9NQZ6 224 aa10.48□□□□□ -0.73
RTN3-208ENST00000537981 B3GNT2Q9NY97 397 aa10.48□□□□□ -0.73
RTN3-208ENST00000537981 RNF112Q9ULX5 631 aa10.48□□□□□ -0.73
RTN3-208ENST00000537981 LYVE1Q9Y5Y7 322 aa10.48□□□□□ -0.73
RTN3-208ENST00000537981 M0QYV0 167 aa10.48□□□□□ -0.73
RTN3-208ENST00000537981 PIP5K1BO14986 540 aa10.48□□□□□ -0.73
RTN3-208ENST00000537981 RGS10O43665 173 aa10.48□□□□□ -0.73
RTN3-208ENST00000537981 FAM20BO75063 409 aa10.48□□□□□ -0.73
RTN3-208ENST00000537981 MICAL2O94851 1124 aa10.48□□□□□ -0.73
RTN3-208ENST00000537981 LINC00032P0C843 101 aa10.48□□□□□ -0.73
RTN3-208ENST00000537981 ACADMP11310 421 aa10.48□□□□□ -0.73
RTN3-208ENST00000537981 RPS3P23396 243 aaKnown RBP eCLIP10.48□□□□□ -0.731e-6■■■■□ 21.3
RTN3-208ENST00000537981 HMGCLP35914 325 aa10.48□□□□□ -0.73
RTN3-208ENST00000537981 FADDQ13158 208 aa10.48□□□□□ -0.73
RTN3-208ENST00000537981 SPDYE7PQ495Y7 208 aa10.48□□□□□ -0.73
RTN3-208ENST00000537981 RBM20Q5T481 1227 aaKnown RBP10.48□□□□□ -0.73
RTN3-208ENST00000537981 SYPL2Q5VXT5 272 aa10.48□□□□□ -0.73
RTN3-208ENST00000537981 LETMD1Q6P1Q0 360 aa10.48□□□□□ -0.73
RTN3-208ENST00000537981 SCIMPQ6UWF3 145 aa10.48□□□□□ -0.73
RTN3-208ENST00000537981 ZNF767PQ75MW2 155 aa10.48□□□□□ -0.73
RTN3-208ENST00000537981 TMEM135Q86UB9 458 aa10.48□□□□□ -0.73
RTN3-208ENST00000537981 PHYKPLQ8IUZ5 450 aa10.48□□□□□ -0.73
RTN3-208ENST00000537981 LAX1Q8IWV1 398 aa10.48□□□□□ -0.73
RTN3-208ENST00000537981 DNAAF3Q8N9W5 541 aa10.48□□□□□ -0.73
RTN3-208ENST00000537981 ITFG1Q8TB96 612 aa10.48□□□□□ -0.73
RTN3-208ENST00000537981 DCAF4Q8WV16 495 aa10.48□□□□□ -0.73
RTN3-208ENST00000537981 EXT2Q93063 718 aa10.48□□□□□ -0.73
RTN3-208ENST00000537981 GPRASP2Q96D09 838 aa10.48□□□□□ -0.73
RTN3-208ENST00000537981 MRGPRX2Q96LB1 330 aa10.48□□□□□ -0.73
RTN3-208ENST00000537981 CNPY3Q9BT09 278 aa10.48□□□□□ -0.73
RTN3-208ENST00000537981 B3GNT5Q9BYG0 378 aa10.48□□□□□ -0.73
RTN3-208ENST00000537981 GSTO2Q9H4Y5 243 aa10.48□□□□□ -0.73
RTN3-208ENST00000537981 SLAMF7Q9NQ25 335 aa10.48□□□□□ -0.73
RTN3-208ENST00000537981 ABCB8Q9NUT2 735 aa10.48□□□□□ -0.73
RTN3-208ENST00000537981 FAM105AQ9NUU6 356 aa10.48□□□□□ -0.73
RTN3-208ENST00000537981 PKP3Q9Y446 797 aa10.48□□□□□ -0.73
RTN3-208ENST00000537981 V9GYH0 126 aa10.48□□□□□ -0.73
RTN3-208ENST00000537981 VSTM5A8MXK1 200 aa10.47□□□□□ -0.73
RTN3-208ENST00000537981 HACD1B0YJ81 288 aa10.47□□□□□ -0.73
RTN3-208ENST00000537981 RASGRP1O95267 797 aa10.47□□□□□ -0.73
RTN3-208ENST00000537981 PROS1P07225 676 aa10.47□□□□□ -0.73
RTN3-208ENST00000537981 MLNP12872 115 aa10.47□□□□□ -0.73
RTN3-208ENST00000537981 CTSKP43235 329 aa10.47□□□□□ -0.73
RTN3-208ENST00000537981 TAS2R39P59534 338 aa10.47□□□□□ -0.73
RTN3-208ENST00000537981 UFM1P61960 85 aa10.47□□□□□ -0.73
RTN3-208ENST00000537981 SH3BP2P78314 561 aa10.47□□□□□ -0.73
RTN3-208ENST00000537981 ZNF789Q5FWF6 425 aa10.47□□□□□ -0.73
RTN3-208ENST00000537981 TOR1AIP1Q5JTV8 583 aa10.47□□□□□ -0.73
RTN3-208ENST00000537981 FAM209BQ5JX69 171 aa10.47□□□□□ -0.73
RTN3-208ENST00000537981 JADE1Q6IE81 842 aa10.47□□□□□ -0.73
RTN3-208ENST00000537981 PIWIL4Q7Z3Z4 852 aaKnown RBP10.47□□□□□ -0.73
RTN3-208ENST00000537981 DCP1BQ8IZD4 617 aaKnown RBP10.47□□□□□ -0.73
RTN3-208ENST00000537981 TAGAPQ8N103 731 aa10.47□□□□□ -0.73
RTN3-208ENST00000537981 ZNF366Q8N895 744 aa10.47□□□□□ -0.73
RTN3-208ENST00000537981 FBLIM1Q8WUP2 373 aa10.47□□□□□ -0.73
RTN3-208ENST00000537981 ST8SIA4Q92187 359 aa10.47□□□□□ -0.73
RTN3-208ENST00000537981 NSUN5Q96P11 429 aaKnown RBP10.47□□□□□ -0.73
RTN3-208ENST00000537981 KCTD15Q96SI1 283 aaPredicted RBP10.47□□□□□ -0.73
RTN3-208ENST00000537981 FAM129BQ96TA1 746 aa10.47□□□□□ -0.73
RTN3-208ENST00000537981 CGRRF1Q99675 332 aa10.47□□□□□ -0.73
RTN3-208ENST00000537981 SLC30A2Q9BRI3 323 aa10.47□□□□□ -0.73
RTN3-208ENST00000537981 WACQ9BTA9 647 aa10.47□□□□□ -0.73
RTN3-208ENST00000537981 MSTO1Q9BUK6 570 aa10.47□□□□□ -0.73
RTN3-208ENST00000537981 ITPAQ9BY32 194 aa10.47□□□□□ -0.73
RTN3-208ENST00000537981 SAV1Q9H4B6 383 aaPredicted RBP10.47□□□□□ -0.73
RTN3-208ENST00000537981 IFT22Q9H7X7 185 aa10.47□□□□□ -0.73
RTN3-208ENST00000537981 BFARQ9NZS9 450 aa10.47□□□□□ -0.73
RTN3-208ENST00000537981 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.47□□□□□ -0.73
RTN3-208ENST00000537981 RIMKLBQ9ULI2 386 aa10.47□□□□□ -0.73
RTN3-208ENST00000537981 ACOT9Q9Y305 439 aa10.47□□□□□ -0.73
RTN3-208ENST00000537981 LINC00862A6NCI5 91 aa10.47□□□□□ -0.73
RTN3-208ENST00000537981 ZNF98A6NK75 572 aa10.47□□□□□ -0.73
RTN3-208ENST00000537981 UBXN8O00124 270 aa10.47□□□□□ -0.73
RTN3-208ENST00000537981 WWP2O00308 870 aa10.47□□□□□ -0.73
RTN3-208ENST00000537981 ARHGEF9O43307 516 aa10.47□□□□□ -0.73
RTN3-208ENST00000537981 SIX3O95343 332 aaPredicted RBP10.47□□□□□ -0.73
RTN3-208ENST00000537981 CYP11A1P05108 521 aa10.47□□□□□ -0.73
RTN3-208ENST00000537981 APOA4P06727 396 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms