RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 NXPE2Q96DL1 559 aa5.57□□□□□ -1.52
CSMD1-215ENST00000537824 FERD3LQ96RJ6 166 aa5.57□□□□□ -1.52
CSMD1-215ENST00000537824 RBCK1Q9BYM8 510 aa5.57□□□□□ -1.52
CSMD1-215ENST00000537824 SOX17Q9H6I2 414 aaPredicted RBP5.57□□□□□ -1.52
CSMD1-215ENST00000537824 SMURF2Q9HAU4 748 aa5.57□□□□□ -1.52
CSMD1-215ENST00000537824 SLC17A6Q9P2U8 582 aa5.57□□□□□ -1.52
CSMD1-215ENST00000537824 DNAJB9Q9UBS3 223 aa5.57□□□□□ -1.52
CSMD1-215ENST00000537824 SEC14L3Q9UDX4 400 aa5.57□□□□□ -1.52
CSMD1-215ENST00000537824 ZNF214Q9UL59 606 aaPredicted RBP5.57□□□□□ -1.52
CSMD1-215ENST00000537824 CDH10Q9Y6N8 788 aa5.57□□□□□ -1.52
CSMD1-215ENST00000537824 B8ZZF3 427 aa5.57□□□□□ -1.52
CSMD1-215ENST00000537824 MCIDASD6RGH6 385 aa5.57□□□□□ -1.52
CSMD1-215ENST00000537824 DENRO43583 198 aaKnown RBP5.57□□□□□ -1.52
CSMD1-215ENST00000537824 NPPAP01160 153 aa5.57□□□□□ -1.52
CSMD1-215ENST00000537824 IFNA17P01571 189 aa5.57□□□□□ -1.52
CSMD1-215ENST00000537824 CTSHP09668 335 aa5.57□□□□□ -1.52
CSMD1-215ENST00000537824 ARCN1P48444 511 aaKnown RBP5.57□□□□□ -1.52
CSMD1-215ENST00000537824 GPX6P59796 221 aa5.57□□□□□ -1.52
CSMD1-215ENST00000537824 MOGSQ13724 837 aa5.57□□□□□ -1.52
CSMD1-215ENST00000537824 PRKD1Q15139 912 aaPredicted RBP5.57□□□□□ -1.52
CSMD1-215ENST00000537824 IL17AQ16552 155 aa5.57□□□□□ -1.52
CSMD1-215ENST00000537824 SLC30A6Q6NXT4 461 aa5.57□□□□□ -1.52
CSMD1-215ENST00000537824 VTCN1Q7Z7D3 282 aa5.57□□□□□ -1.52
CSMD1-215ENST00000537824 FAM35AQ86V20 835 aa5.57□□□□□ -1.52
CSMD1-215ENST00000537824 CCDC71Q8IV32 467 aaPredicted RBP5.57□□□□□ -1.52
CSMD1-215ENST00000537824 UBQLNLQ8IYU4 475 aa5.57□□□□□ -1.52
CSMD1-215ENST00000537824 TRMOQ9BU70 441 aa5.57□□□□□ -1.52
CSMD1-215ENST00000537824 ISCA1Q9BUE6 129 aa5.57□□□□□ -1.52
CSMD1-215ENST00000537824 IFT27Q9BW83 186 aa5.57□□□□□ -1.52
CSMD1-215ENST00000537824 CDADC1Q9BWV3 514 aa5.57□□□□□ -1.52
CSMD1-215ENST00000537824 ADAMTS10Q9H324 1103 aa5.57□□□□□ -1.52
CSMD1-215ENST00000537824 TM9SF3Q9HD45 589 aa5.57□□□□□ -1.52
CSMD1-215ENST00000537824 NPHS1O60500 1241 aa5.57□□□□□ -1.52
CSMD1-215ENST00000537824 RPS6KA4O75676 772 aa5.57□□□□□ -1.52
CSMD1-215ENST00000537824 NOMO3P69849 1222 aa5.57□□□□□ -1.52
CSMD1-215ENST00000537824 MVKQ03426 396 aa5.57□□□□□ -1.52
CSMD1-215ENST00000537824 HEPACAMQ14CZ8 416 aa5.57□□□□□ -1.52
CSMD1-215ENST00000537824 NOMO1Q15155 1222 aa5.57□□□□□ -1.52
CSMD1-215ENST00000537824 GPR68Q15743 365 aa5.57□□□□□ -1.52
CSMD1-215ENST00000537824 ABCA11PQ4W5N1 156 aa5.57□□□□□ -1.52
CSMD1-215ENST00000537824 ANKRD54Q6NXT1 300 aa5.57□□□□□ -1.52
CSMD1-215ENST00000537824 TREML1Q86YW5 311 aa5.57□□□□□ -1.52
CSMD1-215ENST00000537824 TRUB1Q8WWH5 349 aaKnown RBP5.57□□□□□ -1.52
CSMD1-215ENST00000537824 PIWIL1Q96J94 861 aaKnown RBP5.57□□□□□ -1.52
CSMD1-215ENST00000537824 C8orf48Q96LL4 319 aa5.57□□□□□ -1.52
CSMD1-215ENST00000537824 TVP23BQ9NYZ1 205 aa5.57□□□□□ -1.52
CSMD1-215ENST00000537824 GLS2Q9UI32 602 aa5.57□□□□□ -1.52
CSMD1-215ENST00000537824 RBAK-RBAKDNI3L0D1 243 aa5.57□□□□□ -1.52
CSMD1-215ENST00000537824 CYP2A6P11509 494 aaPredicted RBP5.57□□□□□ -1.52
CSMD1-215ENST00000537824 ZNF143P52747 638 aaPredicted RBP5.57□□□□□ -1.52
CSMD1-215ENST00000537824 NDUFAF5Q5TEU4 345 aa5.57□□□□□ -1.52
CSMD1-215ENST00000537824 RBM23Q86U06 439 aaKnown RBP5.57□□□□□ -1.52
CSMD1-215ENST00000537824 ATCAYQ86WG3 371 aa5.57□□□□□ -1.52
CSMD1-215ENST00000537824 NEK7Q8TDX7 302 aa5.57□□□□□ -1.52
CSMD1-215ENST00000537824 CIDECQ96AQ7 238 aaPredicted RBP5.57□□□□□ -1.52
CSMD1-215ENST00000537824 ZNF347Q96SE7 839 aa5.57□□□□□ -1.52
CSMD1-215ENST00000537824 MCMBPQ9BTE3 642 aa5.57□□□□□ -1.52
CSMD1-215ENST00000537824 DUSP16Q9BY84 665 aa5.57□□□□□ -1.52
CSMD1-215ENST00000537824 RHBGQ9H310 441 aa5.57□□□□□ -1.52
CSMD1-215ENST00000537824 ACTR10Q9NZ32 417 aa5.57□□□□□ -1.52
CSMD1-215ENST00000537824 TISP43B9A030 160 aa5.57□□□□□ -1.52
CSMD1-215ENST00000537824 HK1P19367 917 aa5.57□□□□□ -1.52
CSMD1-215ENST00000537824 TKTL1P51854 596 aa5.57□□□□□ -1.52
CSMD1-215ENST00000537824 PSMA6P60900 246 aaKnown RBP5.57□□□□□ -1.52
CSMD1-215ENST00000537824 FGFBP1Q14512 234 aa5.57□□□□□ -1.52
CSMD1-215ENST00000537824 DCST1Q5T197 706 aa5.57□□□□□ -1.52
CSMD1-215ENST00000537824 IGFN1Q86VF2 1251 aa5.57□□□□□ -1.52
CSMD1-215ENST00000537824 ZDHHC17Q8IUH5 632 aa5.57□□□□□ -1.52
CSMD1-215ENST00000537824 ROPN1LQ96C74 230 aa5.57□□□□□ -1.52
CSMD1-215ENST00000537824 LRRC58Q96CX6 371 aa5.57□□□□□ -1.52
CSMD1-215ENST00000537824 LGR4Q9BXB1 951 aa5.57□□□□□ -1.52
CSMD1-215ENST00000537824 FAM83DQ9H4H8 585 aa5.57□□□□□ -1.52
CSMD1-215ENST00000537824 NECTIN3Q9NQS3 549 aa5.57□□□□□ -1.52
CSMD1-215ENST00000537824 CHRAC1Q9NRG0 131 aa5.57□□□□□ -1.52
CSMD1-215ENST00000537824 IKZF2Q9UKS7 526 aa5.57□□□□□ -1.52
CSMD1-215ENST00000537824 CNOT11Q9UKZ1 510 aaKnown RBP5.57□□□□□ -1.52
CSMD1-215ENST00000537824 ZNF536O15090 1300 aa5.57□□□□□ -1.52
CSMD1-215ENST00000537824 CD53P19397 219 aa5.57□□□□□ -1.52
CSMD1-215ENST00000537824 MANFP55145 182 aaKnown RBP5.57□□□□□ -1.52
CSMD1-215ENST00000537824 VAMP2P63027 116 aa5.57□□□□□ -1.52
CSMD1-215ENST00000537824 SULT2A1Q06520 285 aa5.57□□□□□ -1.52
CSMD1-215ENST00000537824 ELP2Q6IA86 826 aa5.57□□□□□ -1.52
CSMD1-215ENST00000537824 DESI1Q6ICB0 168 aa5.57□□□□□ -1.52
CSMD1-215ENST00000537824 CHSY3Q70JA7 882 aa5.57□□□□□ -1.52
CSMD1-215ENST00000537824 NOXA1Q86UR1 476 aa5.57□□□□□ -1.52
CSMD1-215ENST00000537824 SLC2A14Q8TDB8 520 aa5.57□□□□□ -1.52
CSMD1-215ENST00000537824 GPER1Q99527 375 aa5.57□□□□□ -1.52
CSMD1-215ENST00000537824 ASPNQ9BXN1 380 aa5.57□□□□□ -1.52
CSMD1-215ENST00000537824 RTFDC1Q9BY42 306 aaPredicted RBP5.57□□□□□ -1.52
CSMD1-215ENST00000537824 AGO4Q9HCK5 861 aaKnown RBP5.57□□□□□ -1.52
CSMD1-215ENST00000537824 COPZ2Q9P299 210 aa5.57□□□□□ -1.52
CSMD1-215ENST00000537824 RPL36Q9Y3U8 105 aaKnown RBP5.57□□□□□ -1.52
CSMD1-215ENST00000537824 TIMM8BQ9Y5J9 83 aaPredicted RBP5.57□□□□□ -1.52
CSMD1-215ENST00000537824 HCFC1P51610 2035 aa5.57□□□□□ -1.52
CSMD1-215ENST00000537824 SNAPC5O75971 98 aa5.57□□□□□ -1.52
CSMD1-215ENST00000537824 AOC1P19801 751 aa5.57□□□□□ -1.52
CSMD1-215ENST00000537824 RYKP34925 604 aa5.57□□□□□ -1.52
CSMD1-215ENST00000537824 ATP6V0D1P61421 351 aa5.57□□□□□ -1.52
CSMD1-215ENST00000537824 ERVK-8P63133 956 aa5.57□□□□□ -1.52
CSMD1-215ENST00000537824 SCGB2B2Q4G0G5 96 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms