RNA–Protein interactions for RNA: ENST00000535977.5

RAB40C-203, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAB40C, Length 2,717 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-203ENST00000535977 LHX8Q68G74 356 aa17.6■□□□□ 0.41
RAB40C-203ENST00000535977 PSAPL1Q6NUJ1 521 aa17.6■□□□□ 0.41
RAB40C-203ENST00000535977 CCDC81Q6ZN84 652 aa17.6■□□□□ 0.41
RAB40C-203ENST00000535977 RALGPS2Q86X27 583 aaPredicted RBP17.6■□□□□ 0.41
RAB40C-203ENST00000535977 RAET1EQ8TD07 263 aa17.6■□□□□ 0.41
RAB40C-203ENST00000535977 TRMT2BQ96GJ1 504 aaKnown RBP17.6■□□□□ 0.41
RAB40C-203ENST00000535977 MAGED4Q96JG8 741 aa17.6■□□□□ 0.41
RAB40C-203ENST00000535977 MUS81Q96NY9 551 aa17.6■□□□□ 0.41
RAB40C-203ENST00000535977 KLF16Q9BXK1 252 aaPredicted RBP17.6■□□□□ 0.41
RAB40C-203ENST00000535977 MAGEE1Q9HCI5 957 aa17.6■□□□□ 0.41
RAB40C-203ENST00000535977 DHRS7Q9Y394 339 aa17.6■□□□□ 0.41
RAB40C-203ENST00000535977 PCDHGA8Q9Y5G5 932 aa17.6■□□□□ 0.41
RAB40C-203ENST00000535977 IFRD1O00458 451 aaPredicted RBP17.59■□□□□ 0.41
RAB40C-203ENST00000535977 PITPNM1O00562 1244 aa17.59■□□□□ 0.41
RAB40C-203ENST00000535977 TEX28O15482 410 aa17.59■□□□□ 0.41
RAB40C-203ENST00000535977 KCNK2O95069 426 aa17.59■□□□□ 0.41
RAB40C-203ENST00000535977 HMGA1P17096 107 aaKnown RBP17.59■□□□□ 0.41
RAB40C-203ENST00000535977 PRKACBP22694 351 aa17.59■□□□□ 0.41
RAB40C-203ENST00000535977 OXTRP30559 389 aa17.59■□□□□ 0.41
RAB40C-203ENST00000535977 ALDH7A1P49419 539 aaKnown RBP17.59■□□□□ 0.41
RAB40C-203ENST00000535977 EEFSECP57772 596 aaKnown RBP17.59■□□□□ 0.41
RAB40C-203ENST00000535977 NOGQ13253 232 aa17.59■□□□□ 0.41
RAB40C-203ENST00000535977 NFYCQ13952 458 aa17.59■□□□□ 0.41
RAB40C-203ENST00000535977 GPNMBQ14956 572 aa17.59■□□□□ 0.41
RAB40C-203ENST00000535977 CTF1Q16619 201 aa17.59■□□□□ 0.41
RAB40C-203ENST00000535977 CXorf57Q6NSI4 855 aaKnown RBP17.59■□□□□ 0.41
RAB40C-203ENST00000535977 PTRH1Q86Y79 214 aaKnown RBP17.59■□□□□ 0.41
RAB40C-203ENST00000535977 SPARTQ8N0X7 666 aa17.59■□□□□ 0.41
RAB40C-203ENST00000535977 SIDT2Q8NBJ9 832 aaKnown RBP17.59■□□□□ 0.41
RAB40C-203ENST00000535977 EEF1AKMT1Q8WVE0 214 aa17.59■□□□□ 0.41
RAB40C-203ENST00000535977 IL1RL2Q9HB29 575 aa17.59■□□□□ 0.41
RAB40C-203ENST00000535977 CMTM6Q9NX76 183 aa17.59■□□□□ 0.41
RAB40C-203ENST00000535977 FAM234BA2RU67 622 aa17.59■□□□□ 0.41
RAB40C-203ENST00000535977 CCDC154A6NI56 674 aa17.59■□□□□ 0.41
RAB40C-203ENST00000535977 SLC22A1O15245 554 aa17.59■□□□□ 0.41
RAB40C-203ENST00000535977 C1RP00736 705 aa17.59■□□□□ 0.41
RAB40C-203ENST00000535977 GSTM2P28161 218 aa17.59■□□□□ 0.41
RAB40C-203ENST00000535977 SHMT2P34897 504 aa17.59■□□□□ 0.41
RAB40C-203ENST00000535977 ARF5P84085 180 aa17.59■□□□□ 0.41
RAB40C-203ENST00000535977 PCBP2Q15366 365 aaKnown RBP eCLIP17.59■□□□□ 0.414e-6■■■■□ 22.3
RAB40C-203ENST00000535977 TAF12Q16514 161 aa17.59■□□□□ 0.41
RAB40C-203ENST00000535977 TPGS2Q68CL5 300 aa17.59■□□□□ 0.41
RAB40C-203ENST00000535977 EFHBQ8N7U6 833 aa17.59■□□□□ 0.41
RAB40C-203ENST00000535977 ZBED2Q9BTP6 218 aa17.59■□□□□ 0.41
RAB40C-203ENST00000535977 EGFL7Q9UHF1 273 aa17.59■□□□□ 0.41
RAB40C-203ENST00000535977 CCRL2O00421 344 aa17.58■□□□□ 0.41
RAB40C-203ENST00000535977 E2F3O00716 465 aa17.58■□□□□ 0.41
RAB40C-203ENST00000535977 NIPSNAP2O75323 286 aa17.58■□□□□ 0.41
RAB40C-203ENST00000535977 EFEMP2O95967 443 aa17.58■□□□□ 0.41
RAB40C-203ENST00000535977 CD40LGP29965 261 aa17.58■□□□□ 0.41
RAB40C-203ENST00000535977 CDKN1CP49918 316 aaPredicted RBP17.58■□□□□ 0.41
RAB40C-203ENST00000535977 CEP78Q5JTW2 689 aa17.58■□□□□ 0.41
RAB40C-203ENST00000535977 ADAMTSL2Q86TH1 951 aa17.58■□□□□ 0.41
RAB40C-203ENST00000535977 TMEM199Q8N511 208 aa17.58■□□□□ 0.41
RAB40C-203ENST00000535977 TMEM125Q96AQ2 219 aa17.58■□□□□ 0.41
RAB40C-203ENST00000535977 P2RY12Q9H244 342 aa17.58■□□□□ 0.41
RAB40C-203ENST00000535977 SP140LQ9H930 580 aa17.58■□□□□ 0.41
RAB40C-203ENST00000535977 HMX1Q9NP08 348 aaPredicted RBP17.58■□□□□ 0.41
RAB40C-203ENST00000535977 FBXO8Q9NRD0 319 aa17.58■□□□□ 0.41
RAB40C-203ENST00000535977 IL17CQ9P0M4 197 aa17.58■□□□□ 0.41
RAB40C-203ENST00000535977 GIMAP2Q9UG22 337 aa17.58■□□□□ 0.41
RAB40C-203ENST00000535977 SLCO3A1Q9UIG8 710 aa17.58■□□□□ 0.41
RAB40C-203ENST00000535977 ANGPTL3Q9Y5C1 460 aa17.58■□□□□ 0.41
RAB40C-203ENST00000535977 ZSCAN5BA6NJL1 495 aa17.58■□□□□ 0.4
RAB40C-203ENST00000535977 PRMT5O14744 637 aaPredicted RBP17.58■□□□□ 0.4
RAB40C-203ENST00000535977 NADKO95544 446 aaPredicted RBP17.58■□□□□ 0.4
RAB40C-203ENST00000535977 POLR2JP52435 117 aaKnown RBP17.58■□□□□ 0.4
RAB40C-203ENST00000535977 DIO3P55073 304 aa17.58■□□□□ 0.4
RAB40C-203ENST00000535977 RACK1P63244 317 aaKnown RBP17.58■□□□□ 0.4
RAB40C-203ENST00000535977 RSBN1Q5VWQ0 802 aaPredicted RBP17.58■□□□□ 0.4
RAB40C-203ENST00000535977 LRCH3Q96II8 777 aa17.58■□□□□ 0.4
RAB40C-203ENST00000535977 SLC30A3Q99726 388 aa17.58■□□□□ 0.4
RAB40C-203ENST00000535977 ADNPQ9H2P0 1102 aa17.58■□□□□ 0.4
RAB40C-203ENST00000535977 GKN1Q9NS71 199 aa17.58■□□□□ 0.4
RAB40C-203ENST00000535977 GALPQ9UBC7 116 aa17.58■□□□□ 0.4
RAB40C-203ENST00000535977 ADAM12O43184 909 aa17.57■□□□□ 0.4
RAB40C-203ENST00000535977 OR1I1O60431 355 aa17.57■□□□□ 0.4
RAB40C-203ENST00000535977 HMGCLP35914 325 aa17.57■□□□□ 0.4
RAB40C-203ENST00000535977 AGTR2P50052 363 aa17.57■□□□□ 0.4
RAB40C-203ENST00000535977 SGSHP51688 502 aa17.57■□□□□ 0.4
RAB40C-203ENST00000535977 AP1S1P61966 158 aa17.57■□□□□ 0.4
RAB40C-203ENST00000535977 PIGFQ07326 219 aa17.57■□□□□ 0.4
RAB40C-203ENST00000535977 ZIK1Q3SY52 487 aaPredicted RBP17.57■□□□□ 0.4
RAB40C-203ENST00000535977 ATP6AP1LQ52LC2 224 aa17.57■□□□□ 0.4
RAB40C-203ENST00000535977 R3HCC1LQ7Z5L2 792 aaKnown RBP17.57■□□□□ 0.4
RAB40C-203ENST00000535977 TMEM173Q86WV6 379 aaPredicted RBP17.57■□□□□ 0.4
RAB40C-203ENST00000535977 TRPV3Q8NET8 790 aa17.57■□□□□ 0.4
RAB40C-203ENST00000535977 OR6Q1Q8NGQ2 317 aa17.57■□□□□ 0.4
RAB40C-203ENST00000535977 PSMA8Q8TAA3 256 aa17.57■□□□□ 0.4
RAB40C-203ENST00000535977 ZNF461Q8TAF7 563 aa17.57■□□□□ 0.4
RAB40C-203ENST00000535977 OR2B2Q9GZK3 357 aa17.57■□□□□ 0.4
RAB40C-203ENST00000535977 ING2Q9H160 280 aa17.57■□□□□ 0.4
RAB40C-203ENST00000535977 ZNF225Q9UK10 706 aa17.57■□□□□ 0.4
RAB40C-203ENST00000535977 NCF1BA6NI72 391 aaPredicted RBP17.57■□□□□ 0.4
RAB40C-203ENST00000535977 NCF1CA8MVU1 366 aaPredicted RBP17.57■□□□□ 0.4
RAB40C-203ENST00000535977 H0Y626 953 aa17.57■□□□□ 0.4
RAB40C-203ENST00000535977 FZD6O60353 706 aa17.57■□□□□ 0.4
RAB40C-203ENST00000535977 CD160O95971 181 aa17.57■□□□□ 0.4
RAB40C-203ENST00000535977 GNRH1P01148 92 aa17.57■□□□□ 0.4
RAB40C-203ENST00000535977 NCF1P14598 390 aaPredicted RBP17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms