RNA–Protein interactions for RNA: ENST00000535565.6

RBFOX1-206, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-206ENST00000535565 PNMA8BQ9ULN7 279 aaPredicted RBP22.33■■□□□ 1.17
RBFOX1-206ENST00000535565 CCNT2O60583 730 aaKnown RBP22.33■■□□□ 1.16
RBFOX1-206ENST00000535565 STK16O75716 305 aa22.33■■□□□ 1.16
RBFOX1-206ENST00000535565 HALP42357 657 aa22.33■■□□□ 1.16
RBFOX1-206ENST00000535565 HK2P52789 917 aa22.33■■□□□ 1.16
RBFOX1-206ENST00000535565 CDH13P55290 713 aa22.33■■□□□ 1.16
RBFOX1-206ENST00000535565 LCP2Q13094 533 aa22.33■■□□□ 1.16
RBFOX1-206ENST00000535565 EIF2B5Q13144 721 aaKnown RBP22.33■■□□□ 1.16
RBFOX1-206ENST00000535565 C18orf21Q32NC0 220 aaPredicted RBP22.33■■□□□ 1.16
RBFOX1-206ENST00000535565 UAP1L1Q3KQV9 507 aa22.33■■□□□ 1.16
RBFOX1-206ENST00000535565 ATG14Q6ZNE5 492 aa22.33■■□□□ 1.16
RBFOX1-206ENST00000535565 ARMCX6Q7L4S7 300 aa22.33■■□□□ 1.16
RBFOX1-206ENST00000535565 AFAP1L2Q8N4X5 818 aa22.33■■□□□ 1.16
RBFOX1-206ENST00000535565 FBXL6Q8N531 539 aa22.33■■□□□ 1.16
RBFOX1-206ENST00000535565 OR5K2Q8NHB8 316 aa22.33■■□□□ 1.16
RBFOX1-206ENST00000535565 SKA1Q96BD8 255 aa22.33■■□□□ 1.16
RBFOX1-206ENST00000535565 THOC1Q96FV9 657 aaKnown RBP22.33■■□□□ 1.16
RBFOX1-206ENST00000535565 C12orf66Q96MD2 445 aa22.33■■□□□ 1.16
RBFOX1-206ENST00000535565 NSUN5Q96P11 429 aaKnown RBP22.33■■□□□ 1.16
RBFOX1-206ENST00000535565 SIKE1Q9BRV8 207 aa22.33■■□□□ 1.16
RBFOX1-206ENST00000535565 TRIT1Q9H3H1 467 aaKnown RBP22.33■■□□□ 1.16
RBFOX1-206ENST00000535565 HAO1Q9UJM8 370 aa22.33■■□□□ 1.16
RBFOX1-206ENST00000535565 ANGPTL3Q9Y5C1 460 aa22.33■■□□□ 1.16
RBFOX1-206ENST00000535565 TP53BP1Q12888 1972 aaPredicted RBP22.33■■□□□ 1.16
RBFOX1-206ENST00000535565 MYO1CO00159 1063 aa22.32■■□□□ 1.16
RBFOX1-206ENST00000535565 TLR4O00206 839 aa22.32■■□□□ 1.16
RBFOX1-206ENST00000535565 GIPC1O14908 333 aa22.32■■□□□ 1.16
RBFOX1-206ENST00000535565 WNT1P04628 370 aa22.32■■□□□ 1.16
RBFOX1-206ENST00000535565 MPSTP25325 297 aa22.32■■□□□ 1.16
RBFOX1-206ENST00000535565 ACTR1BP42025 376 aa22.32■■□□□ 1.16
RBFOX1-206ENST00000535565 PIK3CGP48736 1102 aa22.32■■□□□ 1.16
RBFOX1-206ENST00000535565 RPL14P50914 215 aaKnown RBP22.32■■□□□ 1.16
RBFOX1-206ENST00000535565 ACTR1AP61163 376 aa22.32■■□□□ 1.16
RBFOX1-206ENST00000535565 SF3A3Q12874 501 aaKnown RBP eCLIP22.32■■□□□ 1.16
RBFOX1-206ENST00000535565 GTF2H2Q13888 395 aa22.32■■□□□ 1.16
RBFOX1-206ENST00000535565 GTF2H2CQ6P1K8 395 aa22.32■■□□□ 1.16
RBFOX1-206ENST00000535565 CUZD1Q86UP6 607 aa22.32■■□□□ 1.16
RBFOX1-206ENST00000535565 TRPC4APQ8TEL6 797 aa22.32■■□□□ 1.16
RBFOX1-206ENST00000535565 RAD51AP1Q96B01 352 aa22.32■■□□□ 1.16
RBFOX1-206ENST00000535565 PKP4Q99569 1192 aa22.32■■□□□ 1.16
RBFOX1-206ENST00000535565 HGH1Q9BTY7 390 aa22.32■■□□□ 1.16
RBFOX1-206ENST00000535565 GSDMCQ9BYG8 508 aa22.32■■□□□ 1.16
RBFOX1-206ENST00000535565 SHCBP1LQ9BZQ2 653 aa22.32■■□□□ 1.16
RBFOX1-206ENST00000535565 SEMA4BQ9NPR2 832 aaPredicted RBP22.32■■□□□ 1.16
RBFOX1-206ENST00000535565 PNPOQ9NVS9 261 aa22.32■■□□□ 1.16
RBFOX1-206ENST00000535565 STK38LQ9Y2H1 464 aa22.32■■□□□ 1.16
RBFOX1-206ENST00000535565 WDR37Q9Y2I8 494 aa22.32■■□□□ 1.16
RBFOX1-206ENST00000535565 K7EPI3 171 aa22.31■■□□□ 1.16
RBFOX1-206ENST00000535565 CTSEP14091 401 aa22.31■■□□□ 1.16
RBFOX1-206ENST00000535565 TSPAN8P19075 237 aa22.31■■□□□ 1.16
RBFOX1-206ENST00000535565 AK4P27144 223 aaPredicted RBP22.31■■□□□ 1.16
RBFOX1-206ENST00000535565 RBBP7Q16576 425 aa22.31■■□□□ 1.16
RBFOX1-206ENST00000535565 SH2D4BQ5SQS7 431 aa22.31■■□□□ 1.16
RBFOX1-206ENST00000535565 LRRC70Q7Z2Q7 622 aa22.31■■□□□ 1.16
RBFOX1-206ENST00000535565 BMP8AQ7Z5Y6 402 aa22.31■■□□□ 1.16
RBFOX1-206ENST00000535565 TBC1D21Q8IYX1 336 aa22.31■■□□□ 1.16
RBFOX1-206ENST00000535565 PHACTR4Q8IZ21 702 aa22.31■■□□□ 1.16
RBFOX1-206ENST00000535565 CACNA2D3Q8IZS8 1091 aa22.31■■□□□ 1.16
RBFOX1-206ENST00000535565 ANKS4BQ8N8V4 417 aa22.31■■□□□ 1.16
RBFOX1-206ENST00000535565 OR5AR1Q8NGP9 310 aa22.31■■□□□ 1.16
RBFOX1-206ENST00000535565 OR9A1PQ8NGU1 263 aa22.31■■□□□ 1.16
RBFOX1-206ENST00000535565 C1orf216Q8TAB5 229 aa22.31■■□□□ 1.16
RBFOX1-206ENST00000535565 AGR3Q8TD06 166 aa22.31■■□□□ 1.16
RBFOX1-206ENST00000535565 SEC16BQ96JE7 1060 aa22.31■■□□□ 1.16
RBFOX1-206ENST00000535565 SLC32A1Q9H598 525 aa22.31■■□□□ 1.16
RBFOX1-206ENST00000535565 STOX2Q9P2F5 926 aaPredicted RBP22.31■■□□□ 1.16
RBFOX1-206ENST00000535565 ASB1Q9Y576 335 aa22.31■■□□□ 1.16
RBFOX1-206ENST00000535565 ST14Q9Y5Y6 855 aa22.31■■□□□ 1.16
RBFOX1-206ENST00000535565 HEBP2Q9Y5Z4 205 aa22.31■■□□□ 1.16
RBFOX1-206ENST00000535565 CFAP20Q9Y6A4 193 aaKnown RBP22.31■■□□□ 1.16
RBFOX1-206ENST00000535565 SLCO1B7G3V0H7 640 aa22.3■■□□□ 1.16
RBFOX1-206ENST00000535565 BCAT2O15382 392 aaPredicted RBP22.3■■□□□ 1.16
RBFOX1-206ENST00000535565 AFF3P51826 1226 aaKnown RBP22.3■■□□□ 1.16
RBFOX1-206ENST00000535565 CCSMST1Q4G0I0 132 aa22.3■■□□□ 1.16
RBFOX1-206ENST00000535565 LYSMD4Q5XG99 296 aa22.3■■□□□ 1.16
RBFOX1-206ENST00000535565 SLC30A9Q6PML9 568 aa22.3■■□□□ 1.16
RBFOX1-206ENST00000535565 AGTRAPQ6RW13 159 aa22.3■■□□□ 1.16
RBFOX1-206ENST00000535565 LAYNQ6UX15 382 aa22.3■■□□□ 1.16
RBFOX1-206ENST00000535565 WASH2PQ6VEQ5 465 aa22.3■■□□□ 1.16
RBFOX1-206ENST00000535565 GOLGA7Q7Z5G4 137 aa22.3■■□□□ 1.16
RBFOX1-206ENST00000535565 TEX9Q8N6V9 391 aa22.3■■□□□ 1.16
RBFOX1-206ENST00000535565 CCDC197Q8NCU1 140 aa22.3■■□□□ 1.16
RBFOX1-206ENST00000535565 PHC3Q8NDX5 983 aa22.3■■□□□ 1.16
RBFOX1-206ENST00000535565 INSM2Q96T92 566 aaPredicted RBP22.3■■□□□ 1.16
RBFOX1-206ENST00000535565 MID1IP1Q9NPA3 183 aa22.3■■□□□ 1.16
RBFOX1-206ENST00000535565 WASH6PQ9NQA3 447 aa22.3■■□□□ 1.16
RBFOX1-206ENST00000535565 PRDM8Q9NQV8 689 aa22.3■■□□□ 1.16
RBFOX1-206ENST00000535565 DNAJC28Q9NX36 388 aa22.3■■□□□ 1.16
RBFOX1-206ENST00000535565 ZDHHC2Q9UIJ5 367 aa22.3■■□□□ 1.16
RBFOX1-206ENST00000535565 DCTN4Q9UJW0 460 aa22.3■■□□□ 1.16
RBFOX1-206ENST00000535565 TNRC6BQ9UPQ9 1833 aaKnown RBP22.3■■□□□ 1.16
RBFOX1-206ENST00000535565 KRT87PA6NCN2 255 aa22.29■■□□□ 1.16
RBFOX1-206ENST00000535565 SLC16A8O95907 504 aa22.29■■□□□ 1.16
RBFOX1-206ENST00000535565 GDF5P43026 501 aa22.29■■□□□ 1.16
RBFOX1-206ENST00000535565 SLC6A12P48065 614 aa22.29■■□□□ 1.16
RBFOX1-206ENST00000535565 DHPSP49366 369 aaPredicted RBP22.29■■□□□ 1.16
RBFOX1-206ENST00000535565 KRT33BQ14525 404 aa22.29■■□□□ 1.16
RBFOX1-206ENST00000535565 TCEA2Q15560 299 aa22.29■■□□□ 1.16
RBFOX1-206ENST00000535565 PTCHD3Q3KNS1 767 aa22.29■■□□□ 1.16
RBFOX1-206ENST00000535565 PMS2CLQ68D20 193 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms