RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 C21orf59P57076 290 aa12.04□□□□□ -0.48
SCARB1-204ENST00000535005 DMPKQ09013 629 aa12.04□□□□□ -0.48
SCARB1-204ENST00000535005 DUOXA1Q1HG43 343 aa12.04□□□□□ -0.48
SCARB1-204ENST00000535005 C1orf146Q5VVC0 180 aa12.04□□□□□ -0.48
SCARB1-204ENST00000535005 SH2D5Q6ZV89 423 aa12.04□□□□□ -0.48
SCARB1-204ENST00000535005 CEP97Q8IW35 865 aa12.04□□□□□ -0.48
SCARB1-204ENST00000535005 BEND7Q8N7W2 519 aaPredicted RBP12.04□□□□□ -0.48
SCARB1-204ENST00000535005 RBM15BQ8NDT2 890 aaKnown RBP12.04□□□□□ -0.48
SCARB1-204ENST00000535005 OR2L2Q8NH16 312 aa12.04□□□□□ -0.48
SCARB1-204ENST00000535005 ACMSDQ8TDX5 336 aa12.04□□□□□ -0.48
SCARB1-204ENST00000535005 PDXPQ96GD0 296 aa12.04□□□□□ -0.48
SCARB1-204ENST00000535005 GPR21Q99679 349 aa12.04□□□□□ -0.48
SCARB1-204ENST00000535005 NMUR2Q9GZQ4 415 aa12.04□□□□□ -0.48
SCARB1-204ENST00000535005 CAB39LQ9H9S4 337 aa12.04□□□□□ -0.48
SCARB1-204ENST00000535005 CYP4F12Q9HCS2 524 aa12.04□□□□□ -0.48
SCARB1-204ENST00000535005 S100A14Q9HCY8 104 aa12.04□□□□□ -0.48
SCARB1-204ENST00000535005 MRPL40Q9NQ50 206 aaKnown RBP12.04□□□□□ -0.48
SCARB1-204ENST00000535005 SNX15Q9NRS6 342 aa12.04□□□□□ -0.48
SCARB1-204ENST00000535005 GALPQ9UBC7 116 aa12.04□□□□□ -0.48
SCARB1-204ENST00000535005 GULP1Q9UBP9 304 aa12.04□□□□□ -0.48
SCARB1-204ENST00000535005 ZNHIT2Q9UHR6 403 aa12.04□□□□□ -0.48
SCARB1-204ENST00000535005 CASQ2O14958 399 aaPredicted RBP12.03□□□□□ -0.48
SCARB1-204ENST00000535005 GPC4O75487 556 aa12.03□□□□□ -0.48
SCARB1-204ENST00000535005 TNFP01375 233 aa12.03□□□□□ -0.48
SCARB1-204ENST00000535005 CSF2P04141 144 aa12.03□□□□□ -0.48
SCARB1-204ENST00000535005 MPOP05164 745 aa12.03□□□□□ -0.48
SCARB1-204ENST00000535005 TYK2P29597 1187 aa12.03□□□□□ -0.48
SCARB1-204ENST00000535005 SLC26A3P40879 764 aa12.03□□□□□ -0.48
SCARB1-204ENST00000535005 BLKP51451 505 aa12.03□□□□□ -0.48
SCARB1-204ENST00000535005 CLCNKAP51800 687 aa12.03□□□□□ -0.48
SCARB1-204ENST00000535005 HK3P52790 923 aa12.03□□□□□ -0.48
SCARB1-204ENST00000535005 ARHGAP8P85298 464 aa12.03□□□□□ -0.48
SCARB1-204ENST00000535005 LRP8Q14114 963 aa12.03□□□□□ -0.48
SCARB1-204ENST00000535005 GBX1Q14549 363 aa12.03□□□□□ -0.48
SCARB1-204ENST00000535005 PLEKHS1Q5SXH7 462 aa12.03□□□□□ -0.48
SCARB1-204ENST00000535005 CRTC3Q6UUV7 619 aa12.03□□□□□ -0.48
SCARB1-204ENST00000535005 AMZ2Q86W34 360 aa12.03□□□□□ -0.48
SCARB1-204ENST00000535005 TMEM126BQ8IUX1 230 aa12.03□□□□□ -0.48
SCARB1-204ENST00000535005 HM13Q8TCT9 377 aa12.03□□□□□ -0.48
SCARB1-204ENST00000535005 CD200R1Q8TD46 325 aa12.03□□□□□ -0.48
SCARB1-204ENST00000535005 TSACCQ96A04 125 aaPredicted RBP12.03□□□□□ -0.48
SCARB1-204ENST00000535005 OR2M4Q96R27 311 aa12.03□□□□□ -0.48
SCARB1-204ENST00000535005 Q9H521 79 aa12.03□□□□□ -0.48
SCARB1-204ENST00000535005 CARS2Q9HA77 564 aaKnown RBP12.03□□□□□ -0.48
SCARB1-204ENST00000535005 SYTL2Q9HCH5 934 aa12.03□□□□□ -0.48
SCARB1-204ENST00000535005 SIRPGQ9P1W8 387 aa12.03□□□□□ -0.48
SCARB1-204ENST00000535005 SLC23A2Q9UGH3 650 aa12.03□□□□□ -0.48
SCARB1-204ENST00000535005 TRMT6Q9UJA5 497 aaKnown RBP12.03□□□□□ -0.48
SCARB1-204ENST00000535005 MOSPD1Q9UJG1 213 aa12.03□□□□□ -0.48
SCARB1-204ENST00000535005 ANKRD6Q9Y2G4 727 aa12.03□□□□□ -0.48
SCARB1-204ENST00000535005 CACNA1EQ15878 2313 aa12.03□□□□□ -0.48
SCARB1-204ENST00000535005 KNL1Q8NG31 2342 aa12.03□□□□□ -0.48
SCARB1-204ENST00000535005 PIKFYVEQ9Y2I7 2098 aa12.02□□□□□ -0.48
SCARB1-204ENST00000535005 A0A1B0GVT2 93 aa12.02□□□□□ -0.48
SCARB1-204ENST00000535005 SLC5A10A0PJK1 596 aa12.02□□□□□ -0.48
SCARB1-204ENST00000535005 WDR91A4D1P6 747 aa12.02□□□□□ -0.48
SCARB1-204ENST00000535005 EIF3FO00303 357 aaPredicted RBP12.02□□□□□ -0.48
SCARB1-204ENST00000535005 DLL1O00548 723 aa12.02□□□□□ -0.48
SCARB1-204ENST00000535005 COPEO14579 308 aa12.02□□□□□ -0.48
SCARB1-204ENST00000535005 TPP1O14773 563 aa12.02□□□□□ -0.48
SCARB1-204ENST00000535005 KLHL2O95198 593 aa12.02□□□□□ -0.48
SCARB1-204ENST00000535005 C2P06681 752 aa12.02□□□□□ -0.48
SCARB1-204ENST00000535005 NME1P15531 152 aaKnown RBP12.02□□□□□ -0.48
SCARB1-204ENST00000535005 SAT1P21673 171 aa12.02□□□□□ -0.48
SCARB1-204ENST00000535005 RANBP1P43487 201 aa12.02□□□□□ -0.48
SCARB1-204ENST00000535005 GNPDA1P46926 289 aa12.02□□□□□ -0.48
SCARB1-204ENST00000535005 BNC1Q01954 994 aa12.02□□□□□ -0.48
SCARB1-204ENST00000535005 PLOD1Q02809 727 aaPredicted RBP12.02□□□□□ -0.48
SCARB1-204ENST00000535005 RPA4Q13156 261 aa12.02□□□□□ -0.48
SCARB1-204ENST00000535005 PDAP1Q13442 181 aaKnown RBP12.02□□□□□ -0.48
SCARB1-204ENST00000535005 TTLL9Q3SXZ7 439 aa12.02□□□□□ -0.48
SCARB1-204ENST00000535005 LAIR1Q6GTX8 287 aa12.02□□□□□ -0.48
SCARB1-204ENST00000535005 PAQR3Q6TCH7 311 aa12.02□□□□□ -0.48
SCARB1-204ENST00000535005 LAYNQ6UX15 382 aa12.02□□□□□ -0.48
SCARB1-204ENST00000535005 XKR5Q6UX68 686 aa12.02□□□□□ -0.48
SCARB1-204ENST00000535005 CMC1Q7Z7K0 106 aa12.02□□□□□ -0.48
SCARB1-204ENST00000535005 CRLF3Q8IUI8 442 aa12.02□□□□□ -0.48
SCARB1-204ENST00000535005 HID1Q8IV36 788 aa12.02□□□□□ -0.48
SCARB1-204ENST00000535005 PHACTR4Q8IZ21 702 aa12.02□□□□□ -0.48
SCARB1-204ENST00000535005 ZBTB2Q8N680 514 aa12.02□□□□□ -0.48
SCARB1-204ENST00000535005 SIDT2Q8NBJ9 832 aaKnown RBP12.02□□□□□ -0.48
SCARB1-204ENST00000535005 ASZ1Q8WWH4 475 aa12.02□□□□□ -0.48
SCARB1-204ENST00000535005 ELMO1Q92556 727 aa12.02□□□□□ -0.48
SCARB1-204ENST00000535005 DGCR14Q96DF8 476 aaKnown RBP12.02□□□□□ -0.48
SCARB1-204ENST00000535005 PDLIM5Q96HC4 596 aaKnown RBP12.02□□□□□ -0.48
SCARB1-204ENST00000535005 SLC30A3Q99726 388 aa12.02□□□□□ -0.48
SCARB1-204ENST00000535005 CCDC106Q9BWC9 280 aa12.02□□□□□ -0.48
SCARB1-204ENST00000535005 KLHL4Q9C0H6 718 aa12.02□□□□□ -0.48
SCARB1-204ENST00000535005 SLC7A8Q9UHI5 535 aa12.02□□□□□ -0.48
SCARB1-204ENST00000535005 KLF15Q9UIH9 416 aa12.02□□□□□ -0.48
SCARB1-204ENST00000535005 RAB23Q9ULC3 237 aa12.02□□□□□ -0.48
SCARB1-204ENST00000535005 PRKAB1Q9Y478 270 aa12.02□□□□□ -0.48
SCARB1-204ENST00000535005 A0A087X1B8 175 aa12.02□□□□□ -0.49
SCARB1-204ENST00000535005 A0A096LPK6 155 aa12.02□□□□□ -0.49
SCARB1-204ENST00000535005 PHGDHO43175 533 aaKnown RBP12.02□□□□□ -0.49
SCARB1-204ENST00000535005 SLCO2B1O94956 709 aa12.02□□□□□ -0.49
SCARB1-204ENST00000535005 APOA4P06727 396 aa12.02□□□□□ -0.49
SCARB1-204ENST00000535005 SLC35E2BP0CK96 405 aa12.02□□□□□ -0.49
SCARB1-204ENST00000535005 CBSLP0DN79 551 aa12.02□□□□□ -0.49
SCARB1-204ENST00000535005 COL6A2P12110 1019 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms